Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 1.1e-187 659.8 334 100.0
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 1.7e-164 582.8 312 94.2
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 2.2e-164 582.4 312 94.6
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 2.1e-159 565.8 316 90.8
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 1.4e-142 510.0 301 86.7
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 1.7e-140 503.1 311 81.7
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 2.5e-136 489.2 270 91.5
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 6.3e-135 484.6 310 77.1
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 3.2e-131 472.2 311 76.2
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 7.2e-131 471.1 311 74.3
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 3.5e-130 468.8 311 75.6
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 7.9e-130 467.6 311 74.9
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 1.0e-129 467.2 308 76.3
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 1.3e-129 466.8 310 75.2
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.3e-129 466.1 311 74.0
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 3.9e-129 465.3 310 75.5
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 5.1e-129 464.9 309 74.1
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.5e-128 463.4 311 74.0
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 2.5e-128 462.6 308 75.6
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 2.5e-128 462.6 309 76.4
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 5.7e-128 461.5 309 76.1
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 1.3e-127 460.3 308 75.6
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 1.3e-127 460.3 311 73.3
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 1.3e-127 460.3 311 72.7
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 1.6e-127 459.9 311 74.3
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 4.8e-127 458.4 313 75.7
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 9.0e-126 454.1 309 73.8
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 1.5e-125 453.4 311 73.0
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 3.4e-125 452.2 329 70.2
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 5.9e-125 451.4 313 74.4
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 2.5e-123 446.0 309 73.8
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 4.2e-123 445.3 309 70.6
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 4.2e-123 445.3 325 69.8
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 4.2e-123 445.3 311 71.7
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 5.5e-123 444.9 310 71.6
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 5.5e-123 444.9 310 71.9
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 7.2e-123 444.5 309 72.2
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 1.2e-122 443.7 325 71.1
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 1.6e-122 443.4 310 70.6
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 1.6e-122 443.4 309 71.5
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 3.6e-122 442.2 309 69.9
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 1.4e-121 440.3 318 70.1
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 1.4e-121 440.3 309 72.5
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 1.8e-121 439.9 309 71.2
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 2.3e-121 439.5 325 69.8
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 3.0e-121 439.1 316 71.2
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 3.9e-121 438.7 308 70.5
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 5.1e-121 438.3 309 70.2
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 6.7e-121 438.0 311 69.5
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 6.7e-121 438.0 309 72.5
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 6.7e-121 438.0 325 70.5
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 7.4e-120 434.5 314 71.0
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 2.2e-119 433.0 316 71.5
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 2.8e-119 432.6 309 69.9
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 2.8e-119 432.6 316 71.8
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 3.7e-119 432.2 313 69.0
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 1.1e-118 430.6 309 70.6
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 1.4e-118 430.3 309 68.6
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.4e-118 430.3 281 74.4
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 1.8e-118 429.9 309 68.3
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 2.4e-118 429.5 317 71.6
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 3.1e-118 429.1 309 68.3
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 1.2e-117 427.2 309 68.3
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 1.5e-117 426.8 309 68.3
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 2.0e-117 426.4 308 71.4
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 2.6e-117 426.0 309 68.3
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 5.9e-117 424.9 308 70.5
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 5.9e-117 424.9 312 69.9
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 1.0e-116 424.1 308 70.5
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 2.2e-116 422.9 317 69.1
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 3.8e-116 422.2 308 70.5
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 8.5e-116 421.0 308 69.8
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 1.1e-115 420.6 324 67.3
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 4.2e-115 418.7 308 69.8
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 4.2e-115 418.7 312 68.9
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 2.3e-113 412.9 308 68.5
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 1.5e-112 410.2 313 69.3
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 4.8e-111 405.2 279 71.3
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 7.0e-110 401.4 326 66.0
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 1.2e-109 400.6 310 67.7
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 2.6e-109 399.4 311 66.9
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 9.7e-104 380.9 379 57.0
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 1.7e-103 380.2 310 64.5
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 2.8e-103 379.4 308 64.6
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 1.0e-100 370.9 308 64.3
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 1.7e-100 370.2 391 54.0
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 1.1e-99 367.5 314 62.7
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 4.7e-98 362.1 337 59.3
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 1.3e-95 354.0 309 61.8
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 2.2e-95 353.2 309 59.2
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 2.5e-91 339.7 337 58.5
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 5.4e-86 322.0 309 55.7
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 8.0e-82 308.1 310 54.2
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 2.2e-79 300.1 205 73.7
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 3.5e-77 292.7 309 52.1
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 3.0e-76 289.7 212 68.9
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 6.2e-66 255.4 294 49.3
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 1.0e-60 238.0 275 51.6
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 3.0e-52 209.9 341 39.0
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 2.2e-47 193.7 221 45.2
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 4.6e-45 186.0 188 53.7
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 3.9e-44 183.0 163 58.3
CDE02G3282 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 9.0e-41 171.8 176 55.7
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 1.5e-40 171.0 115 67.8
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.3e-39 167.9 104 78.8
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 2.5e-35 153.7 106 68.9
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 4.1e-17 93.2 230 32.2
Lsat_1_v5_gn_1_96520 Lactuca sativa HOM05D007053 ORTHO05D008922 8.7e-12 75.5 49 65.3
Lsat_1_v5_gn_5_96721 Lactuca sativa HOM05D007053 ORTHO05D008922 6.3e-10 69.3 51 62.7
Os01g0764600 Oryza sativa ssp. japonica HOM05D007053 ORTHO05D008922 8.2e-10 68.9 85 44.7
SEGI_13989 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 1.7e-07 61.2 78 50.0
MELO3C009229.2 Cucumis melo HOM05D001947 ORTHO05D002440 5.5e-06 56.2 125 34.4
CsaV3_3G034580 Cucumis sativus L. HOM05D001947 ORTHO05D002440 5.5e-06 56.2 125 34.4
ECA238G1315 Erigeron canadensis HOM05D001947 ORTHO05D002440 9.4e-06 55.5 142 33.1


User provided reference genes

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