Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G765.4 Capsicum annuum HOM05D001997 ORTHO05D004620 1.4e-63 246.1 127 100.0
CAN.G138.1 Capsicum annuum HOM05D001997 ORTHO05D004620 1.9e-36 156.0 94 85.1
CAN.G46.28 Capsicum annuum HOM05D001997 ORTHO05D004620 3.3e-36 155.2 94 84.0
Solyc06g073490.2 Solanum lycopersicum HOM05D001997 ORTHO05D004620 2.1e-35 152.5 94 85.1
Sopen06g029850 Solanum pennellii HOM05D001997 ORTHO05D004620 2.1e-35 152.5 94 85.1
PGSC0003DMG400026903 Solanum tuberosum HOM05D001997 ORTHO05D004620 6.2e-35 151.0 94 84.0
CAN.G1014.21 Capsicum annuum HOM05D001997 ORTHO05D004620 1.4e-34 149.8 94 84.0
Nitab4.5_0010690g0010 Nicotiana tabacum HOM05D001997 ORTHO05D004620 3.4e-33 145.2 94 79.8
Peaxi162Scf00375g00082 Petunia axillaris HOM05D001997 ORTHO05D004620 4.5e-33 144.8 94 79.8
MSTRG.12412 Avicennia marina HOM05D001997 ORTHO05D004620 6.0e-30 134.4 94 73.4
Dinv22695 Davidia involucrata HOM05D001997 ORTHO05D004620 6.0e-30 134.4 93 75.3
MSTRG.17660 Avicennia marina HOM05D001997 ORTHO05D004620 1.3e-29 133.3 94 71.3
Rhsim09G0030400 Rhododendron simsii HOM05D001997 ORTHO05D004620 1.3e-29 133.3 94 72.3
Hma1.2p1_0597F.1_g186510 Hydrangea macrophylla HOM05D001997 ORTHO05D004620 1.8e-29 132.9 94 70.2
TAR622G0498 Trochodendron aralioides HOM05D001997 ORTHO05D004620 2.3e-29 132.5 94 70.2
Duzib093G0427 Durio zibethinus HOM05D001997 ORTHO05D004620 3.9e-29 131.7 94 72.3
Oeu015677.2 Olea europaea HOM05D001997 ORTHO05D004620 3.9e-29 131.7 92 71.7
GSVIVG01013582001 Vitis vinifera HOM05D001997 ORTHO05D004620 5.1e-29 131.3 100 66.0
Actinidia35961 Actinidia chinensis HOM05D001997 ORTHO05D004620 8.7e-29 130.6 94 71.3
Cfa015772 Carpinus fangiana HOM05D001997 ORTHO05D004620 1.1e-28 130.2 94 73.4
PGR044G1365 Punica granatum HOM05D001997 ORTHO05D004620 1.1e-28 130.2 94 71.3
Lsat_1_v5_gn_6_55020 Lactuca sativa HOM05D001997 ORTHO05D004620 1.9e-28 129.4 93 72.0
Cc01_g08750 Coffea canephora HOM05D001997 ORTHO05D004620 2.5e-28 129.0 93 69.9
Atru.chr3.1570 Acer truncatum HOM05D001997 ORTHO05D004620 5.6e-28 127.9 94 69.1
Atru.chr3.1589 Acer truncatum HOM05D001997 ORTHO05D004620 5.6e-28 127.9 94 69.1
Ciclev10019328m.g Citrus clementina HOM05D001997 ORTHO05D004620 9.6e-28 127.1 94 69.1
QL10p047463 Quercus lobata HOM05D001997 ORTHO05D004620 1.3e-27 126.7 94 68.1
Oeu048804.2 Olea europaea HOM05D001997 ORTHO05D004620 1.6e-27 126.3 92 66.3
Eucgr.A00056 Eucalyptus grandis HOM05D001997 ORTHO05D004620 2.1e-27 125.9 94 71.3
Lj6C60T7 Lonicera japonica HOM05D001997 ORTHO05D004620 2.1e-27 125.9 94 70.2
Gohir.D08G083300 Gossypium hirsutum HOM05D001997 ORTHO05D004620 2.8e-27 125.6 93 69.9
Gohir.D09G164700 Gossypium hirsutum HOM05D001997 ORTHO05D004620 2.8e-27 125.6 93 69.9
Gorai.004G087500 Gossypium raimondii HOM05D001997 ORTHO05D004620 2.8e-27 125.6 93 69.9
Gorai.006G186500 Gossypium raimondii HOM05D001997 ORTHO05D004620 2.8e-27 125.6 93 69.9
Manes.04G048600 Manihot esculenta HOM05D001997 ORTHO05D004620 2.8e-27 125.6 94 64.9
Gohir.A08G074100 Gossypium hirsutum HOM05D001997 ORTHO05D004620 3.7e-27 125.2 93 69.9
SGA_v2.0_scaffold16G07570 Striga asiatica HOM05D001997 ORTHO05D004620 3.7e-27 125.2 94 68.1
TAR636G0474 Trochodendron aralioides HOM05D001997 ORTHO05D004620 3.7e-27 125.2 94 68.1
Thecc.05G002900 Theobroma cacao HOM05D001997 ORTHO05D004620 1.1e-26 123.6 94 69.1
Gohir.A09G169000 Gossypium hirsutum HOM05D001997 ORTHO05D004620 1.8e-26 122.9 93 68.8
CANSAT21G1219 Cannabis sativa HOM05D001997 ORTHO05D004620 2.4e-26 122.5 93 67.7
RcHm_v2.0_Chr1g0354651 Rosa chinensis HOM05D001997 ORTHO05D004620 3.1e-26 122.1 94 64.9
Prupe.2G167200 Prunus persica HOM05D001997 ORTHO05D004620 4.0e-26 121.7 94 66.0
TWI36G0125 Tripterygium wilfordii HOM05D001997 ORTHO05D004620 4.0e-26 121.7 94 68.1
Cpa.g.sc81.168 Carica papaya HOM05D001997 ORTHO05D004620 5.3e-26 121.3 94 68.1
Potri.007G124700 Populus trichocarpa HOM05D001997 ORTHO05D004620 5.3e-26 121.3 94 64.9
CiPaw.02G056300 Carya illinoinensis HOM05D001997 ORTHO05D004620 6.9e-26 120.9 87 71.3
AUR62035000 Chenopodium quinoa HOM05D001997 ORTHO05D004620 6.9e-26 120.9 94 68.1
Haze_00722 Corylus avellana HOM05D001997 ORTHO05D004620 6.9e-26 120.9 87 73.6
MD07G1139400 Malus domestica HOM05D001997 ORTHO05D004620 1.2e-25 120.2 94 64.9
HanXRQChr07g0186151 Helianthus annuus HOM05D001997 ORTHO05D004620 1.5e-25 119.8 94 67.0
Sc19g0002180 Simmondsia chinensis HOM05D001997 ORTHO05D004620 1.5e-25 119.8 89 66.3
FvH4_7g14000 Fragaria vesca HOM05D001997 ORTHO05D004620 3.4e-25 118.6 94 63.8
FAN03G0113 Fragaria x ananassa HOM05D001997 ORTHO05D004620 3.4e-25 118.6 94 63.8
FAN06G3325 Fragaria x ananassa HOM05D001997 ORTHO05D004620 3.4e-25 118.6 94 63.8
FAN06G4213 Fragaria x ananassa HOM05D001997 ORTHO05D004620 3.4e-25 118.6 94 63.8
FAN10G2611 Fragaria x ananassa HOM05D001997 ORTHO05D004620 3.4e-25 118.6 94 63.8
FAN10G3464 Fragaria x ananassa HOM05D001997 ORTHO05D004620 3.4e-25 118.6 94 63.8
Glyma.11G094600 Glycine max HOM05D001997 ORTHO05D004620 3.4e-25 118.6 88 69.3
FAN01G1889 Fragaria x ananassa HOM05D001997 ORTHO05D004620 5.8e-25 117.9 94 63.8
Sabra17G0022300 Salix brachista HOM05D001997 ORTHO05D004620 5.8e-25 117.9 94 66.0
HanXRQChr02g0057961 Helianthus annuus HOM05D001997 ORTHO05D004620 1.0e-24 117.1 92 66.3
Potri.017G035700 Populus trichocarpa HOM05D001997 ORTHO05D004620 1.0e-24 117.1 94 64.9
Migut.N02417 Erythranthe guttata HOM05D001997 ORTHO05D004620 1.7e-24 116.3 94 61.7
Glyma.12G021000 Glycine max HOM05D001997 ORTHO05D004620 1.7e-24 116.3 88 68.2
AUR62037461 Chenopodium quinoa HOM05D001997 ORTHO05D004620 2.9e-24 115.5 94 64.9
SalBow3G0527 Salvia bowleyana HOM05D001997 ORTHO05D004620 2.9e-24 115.5 94 62.8
Sabra17G0022600 Salix brachista HOM05D001997 ORTHO05D004620 4.9e-24 114.8 94 63.8
Psat7g172720 Pisum sativum HOM05D001997 ORTHO05D004620 6.5e-24 114.4 93 64.5
arahy.Tifrunner.gnm1.ann1.7X5TTD Arachis hypogaea HOM05D001997 ORTHO05D004620 1.4e-23 113.2 88 64.8
ECA233G5997 Erigeron canadensis HOM05D001997 ORTHO05D004620 1.4e-23 113.2 94 63.8
CARHR138340 Cardamine hirsuta HOM05D001997 ORTHO05D004620 1.9e-23 112.8 94 62.8
FAN10G4317 Fragaria x ananassa HOM05D001997 ORTHO05D004620 1.9e-23 112.8 94 61.7
Lj3g0010188 Lotus japonicus HOM05D001997 ORTHO05D004620 2.5e-23 112.5 93 66.7
Medtr4g076620 Medicago truncatula HOM05D001997 ORTHO05D004620 2.5e-23 112.5 88 65.9
Phvul.011G023500 Phaseolus vulgaris HOM05D001997 ORTHO05D004620 3.2e-23 112.1 93 65.6
Glyma.03G127700 Glycine max HOM05D001997 ORTHO05D004620 4.2e-23 111.7 93 65.6
Ah.05g167000 Amaranthus hybridus HOM05D001997 ORTHO05D004620 5.5e-23 111.3 92 60.9
MBI11_g35030_MAGBIO Magnolia biondii HOM05D001997 ORTHO05D004620 5.5e-23 111.3 93 58.1
THA.LOC104802304 Tarenaya hassleriana HOM05D001997 ORTHO05D004620 5.5e-23 111.3 94 61.7
VMungo1127G1251 Vigna mungo HOM05D001997 ORTHO05D004620 5.5e-23 111.3 93 65.6
PSO017G4366 Papaver somniferum HOM05D001997 ORTHO05D004620 1.6e-22 109.8 94 59.6
AL4G41910 Arabidopsis lyrata HOM05D001997 ORTHO05D004620 2.1e-22 109.4 94 60.6
Ca_26058_v3 Cicer arietinum L. HOM05D001997 ORTHO05D004620 2.7e-22 109.0 94 62.8
Ca_30128_v3 Cicer arietinum L. HOM05D001997 ORTHO05D004620 2.7e-22 109.0 94 62.8
Thhalv10001801m.g Eutrema salsugineum HOM05D001997 ORTHO05D004620 2.7e-22 109.0 94 60.6
TPR.G13756 Trifolium pratense HOM05D001997 ORTHO05D004620 2.7e-22 109.0 93 60.2
Glyma.19G130251 Glycine max HOM05D001997 ORTHO05D004620 4.6e-22 108.2 93 63.4
AT2G43250 Arabidopsis thaliana HOM05D001997 ORTHO05D004620 6.0e-22 107.8 94 59.6
BcaB06g29293 Brassica carinata HOM05D001997 ORTHO05D004620 7.9e-22 107.5 87 62.1
Carub.0004s2573 Capsella rubella HOM05D001997 ORTHO05D004620 1.0e-21 107.1 87 62.1
DCAR_010832 Daucus carota HOM05D001997 ORTHO05D004620 1.0e-21 107.1 93 58.1
Cfa015264 Carpinus fangiana HOM05D001997 ORTHO05D004620 2.3e-21 105.9 94 53.2
Medtr4g076640 Medicago truncatula HOM05D001997 ORTHO05D004620 2.3e-21 105.9 88 60.2
A04p32530 Brassica napus HOM05D001997 ORTHO05D004620 5.1e-21 104.8 93 59.1
BraA04t18717Z Brassica rapa HOM05D001997 ORTHO05D004620 5.1e-21 104.8 93 59.1
PSO675G0019 Papaver somniferum HOM05D001997 ORTHO05D004620 1.1e-20 103.6 94 55.3
Sp4g25380 Schrenkiella parvula HOM05D001997 ORTHO05D004620 1.5e-20 103.2 93 58.1
BcaC02g07197 Brassica carinata HOM05D001997 ORTHO05D004620 1.9e-20 102.8 93 58.1
C04p70220 Brassica napus HOM05D001997 ORTHO05D004620 1.9e-20 102.8 93 58.1
BolC4t28526H Brassica oleracea HOM05D001997 ORTHO05D004620 1.9e-20 102.8 93 58.1
Lalb_Chr01g0001101 Lupinus albus HOM05D001997 ORTHO05D004620 1.9e-20 102.8 87 62.1
MD01G1056500 Malus domestica HOM05D001997 ORTHO05D004620 1.9e-20 102.8 86 62.8
unitig_22.g6172 Utricularia gibba HOM05D001997 ORTHO05D004620 2.5e-20 102.4 95 61.1
C04p70240 Brassica napus HOM05D001997 ORTHO05D004620 3.3e-20 102.1 93 58.1
CSS0007184 Camellia sinensis var. sinensis HOM05D001997 ORTHO05D004620 3.3e-20 102.1 63 74.6
Dinv05995 Davidia involucrata HOM05D001997 ORTHO05D004620 5.7e-20 101.3 90 62.2
TPR.G13749 Trifolium pratense HOM05D001997 ORTHO05D004620 5.7e-20 101.3 88 60.2
Lsat_1_v5_gn_5_125441 Lactuca sativa HOM05D001997 ORTHO05D004620 9.7e-20 100.5 69 71.0
Haze_01373 Corylus avellana HOM05D001997 ORTHO05D004620 1.3e-19 100.1 94 51.1
Aqoxy7G03960 Aquilegia oxysepala HOM05D001997 ORTHO05D004620 2.8e-19 99.0 92 53.3
Lj4g0020139 Lotus japonicus HOM05D001997 ORTHO05D004620 2.8e-19 99.0 86 64.0
arahy.Tifrunner.gnm1.ann1.JTZ133 Arachis hypogaea HOM05D001997 ORTHO05D004620 3.7e-19 98.6 87 60.9
BcaC02g07196 Brassica carinata HOM05D001997 ORTHO05D004620 1.1e-18 97.1 85 60.0
Dinv44213 Davidia involucrata HOM05D001997 ORTHO05D004620 1.1e-18 97.1 62 74.2
HPP92_007608 Vanilla planifolia HOM05D001997 ORTHO05D004620 2.4e-18 95.9 93 50.5
SHI06486 Sapria himalayana HOM05D002588 ORTHO05D002979 4.1e-18 95.1 74 60.8
BcaB06g29296 Brassica carinata HOM05D001997 ORTHO05D004620 5.3e-18 94.7 68 67.6
CDE08G0116 Ceratophyllum demersum HOM05D001997 ORTHO05D004620 6.9e-18 94.4 86 58.1
BcaB06g29295 Brassica carinata HOM05D001997 ORTHO05D004620 7.6e-17 90.9 85 57.6
Zm00001eb425530 Zea mays HOM05D001997 ORTHO05D004620 2.9e-16 89.0 93 46.2
ATR0743G280 Amborella trichopoda HOM05D001997 ORTHO05D004620 5.0e-16 88.2 93 48.4
Os04g0490700 Oryza sativa ssp. japonica HOM05D001997 ORTHO05D004620 9.4e-15 84.0 93 45.2
BcaC07g39373 Brassica carinata HOM05D001997 ORTHO05D004620 2.1e-14 82.8 88 50.0
BolC8t50019H Brassica oleracea HOM05D001997 ORTHO05D004620 2.1e-14 82.8 88 50.0
A06p18770 Brassica napus HOM05D001997 ORTHO05D004620 2.7e-14 82.4 88 50.0
C08p23950 Brassica napus HOM05D001997 ORTHO05D004620 2.7e-14 82.4 88 50.0
Medtr4g076610 Medicago truncatula HOM05D001997 ORTHO05D004620 7.9e-14 80.9 98 51.0
Actinidia28986 Actinidia chinensis HOM05D001997 ORTHO05D004620 3.9e-13 78.6 89 49.4
Thhalv10001772m.g Eutrema salsugineum HOM05D001997 ORTHO05D004620 6.7e-13 77.8 93 48.4
BraA05t19355Z Brassica rapa HOM05D001997 ORTHO05D004620 4.3e-12 75.1 88 51.1
SEGI_28245 Sequoiadendron giganteum HOM05D001997 ORTHO05D004620 7.4e-12 74.3 91 46.2
C04p04300 Brassica napus HOM05D001997 ORTHO05D004620 9.7e-12 73.9 88 48.9
BolC4t22066H Brassica oleracea HOM05D001997 ORTHO05D004620 9.7e-12 73.9 88 48.9
A05p03690 Brassica napus HOM05D001997 ORTHO05D004620 1.3e-11 73.6 88 48.9
BolC4t28528H Brassica oleracea HOM05D001997 ORTHO05D004620 2.8e-11 72.4 96 46.9
BcaNung06617 Brassica carinata HOM05D001997 ORTHO05D004620 3.4e-09 65.5 77 50.6
C04p70260 Brassica napus HOM05D001997 ORTHO05D004620 3.4e-09 65.5 59 59.3
A04p32560 Brassica napus HOM05D001997 ORTHO05D004620 2.9e-08 62.4 59 57.6
BraA04t18720Z Brassica rapa HOM05D001997 ORTHO05D004620 2.9e-08 62.4 59 57.6
BcaNung06616 Brassica carinata HOM05D001997 ORTHO05D004620 2.1e-06 56.2 81 39.5
TPR.G290 Trifolium pratense HOM05D001997 ORTHO05D004620 3.6e-06 55.5 45 60.0
TPR.G11744 Trifolium pratense HOM05D001997 ORTHO05D004620 4.7e-06 55.1 43 60.5
BcaB01g03399 Brassica carinata HOM05D001997 ORTHO05D004620 7.9e-06 54.3 85 41.2


User provided reference genes

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