Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G765.32 Capsicum annuum HOM05D000535 ORTHO05D011982 6.0e-100 367.5 179 100.0
CAN.G765.34 Capsicum annuum HOM05D000535 ORTHO05D011982 2.5e-42 176.0 222 50.5
CAN.G765.33 Capsicum annuum HOM05D000535 ORTHO05D011982 4.8e-41 171.8 224 47.8
CAN.G765.31 Capsicum annuum HOM05D000002 ORTHO05D000001 6.1e-36 154.8 201 46.3
CAN.G765.29 Capsicum annuum HOM05D000535 ORTHO05D011982 1.3e-33 147.1 224 46.0
PGSC0003DMG400008536 Solanum tuberosum HOM05D000535 ORTHO05D011982 8.2e-33 144.4 219 42.9
CAN.G765.30 Capsicum annuum HOM05D000535 ORTHO05D011982 3.8e-30 135.6 224 42.9
PGSC0003DMG400046234 Solanum tuberosum HOM05D000535 ORTHO05D011982 3.9e-27 125.6 209 40.7
CAN.G1156.34 Capsicum annuum HOM05D000535 ORTHO05D011982 8.8e-27 124.4 239 39.7
Nitab4.5_0001486g0010 Nicotiana tabacum HOM05D000535 ORTHO05D011982 2.8e-25 119.4 214 40.7
Nitab4.5_0000425g0210 Nicotiana tabacum HOM05D000535 ORTHO05D011982 3.1e-24 115.9 196 41.8
Nitab4.5_0000425g0230 Nicotiana tabacum HOM05D000535 ORTHO05D011982 4.5e-23 112.1 195 41.0
PGSC0003DMG400008546 Solanum tuberosum HOM05D000535 ORTHO05D011982 8.0e-20 101.3 218 34.9
CAN.G1954.2 Capsicum annuum HOM05D000535 ORTHO05D011982 1.0e-14 84.3 118 44.1
Lj5P167T32 Lonicera japonica HOM05D000535 ORTHO05D000427 7.5e-10 68.2 175 34.3
Eucgr.K02323 Eucalyptus grandis HOM05D000535 ORTHO05D000427 8.3e-09 64.7 185 31.4
THA.LOC104812195 Tarenaya hassleriana HOM05D000535 ORTHO05D000427 8.3e-09 64.7 177 33.3
Oeu020486.1 Olea europaea HOM05D000535 ORTHO05D000427 2.4e-08 63.2 167 30.5
MSTRG.11561 Avicennia marina HOM05D000535 ORTHO05D000427 4.1e-08 62.4 204 31.4
MELO3C002176.2 Cucumis melo HOM05D000535 ORTHO05D000427 5.4e-08 62.0 179 34.1
GSVIVG01012920001 Vitis vinifera HOM05D000535 ORTHO05D000427 9.1e-08 61.2 203 30.0
Oeu057516.1 Olea europaea HOM05D000535 ORTHO05D000427 2.0e-07 60.1 172 32.0
SalBow5G3406 Salvia bowleyana HOM05D000535 ORTHO05D000427 4.5e-07 58.9 184 29.3
Dinv04609 Davidia involucrata HOM05D000535 ORTHO05D000427 5.9e-07 58.5 199 32.2
Cc00_g23760 Coffea canephora HOM05D000535 ORTHO05D000427 7.7e-07 58.2 207 30.0
Cc04_g08350 Coffea canephora HOM05D000535 ORTHO05D000427 7.7e-07 58.2 213 30.0
Cc04_g08380 Coffea canephora HOM05D000535 ORTHO05D000427 7.7e-07 58.2 207 29.5
Cc00_g28730 Coffea canephora HOM05D000535 ORTHO05D000427 1.0e-06 57.8 206 29.1
Sp1g15940 Schrenkiella parvula HOM05D000535 ORTHO05D000427 1.0e-06 57.8 196 29.6
Migut.O00272 Erythranthe guttata HOM05D000535 ORTHO05D000427 1.7e-06 57.0 200 30.5
Ciclev10023257m.g Citrus clementina HOM05D000535 ORTHO05D000427 2.3e-06 56.6 206 30.1
Ciclev10023572m.g Citrus clementina HOM05D000535 ORTHO05D000427 2.3e-06 56.6 206 30.1
GSVIVG01012936001 Vitis vinifera HOM05D000535 ORTHO05D000427 2.3e-06 56.6 208 32.7
Ciclev10022284m.g Citrus clementina HOM05D000535 ORTHO05D000427 2.9e-06 56.2 206 29.6
CAN.G128.72 Capsicum annuum HOM05D000535 ORTHO05D000427 5.0e-06 55.5 224 26.8
Cc00_g34040 Coffea canephora HOM05D000535 ORTHO05D000427 5.0e-06 55.5 208 29.8
Oeu029075.1 Olea europaea HOM05D000535 ORTHO05D000427 5.0e-06 55.5 217 30.9
Ciclev10022282m.g Citrus clementina HOM05D000535 ORTHO05D000427 6.6e-06 55.1 211 29.9
Ciclev10023320m.g Citrus clementina HOM05D000535 ORTHO05D000427 6.6e-06 55.1 211 29.4
Cc00_g28690 Coffea canephora HOM05D000535 ORTHO05D000427 6.6e-06 55.1 208 29.8
Duzib128G0529 Durio zibethinus HOM05D000535 ORTHO05D000427 6.6e-06 55.1 206 30.6
Lj2g0028248 Lotus japonicus HOM05D000535 ORTHO05D000427 6.6e-06 55.1 120 37.5
Sopen03g029400 Solanum pennellii HOM05D025152 ORTHO05D011982 6.6e-06 55.1 226 28.3
Aa31LG4G3600 Aethionema arabicum HOM05D000535 ORTHO05D000427 8.6e-06 54.7 202 27.7
Nitab4.5_0006903g0030 Nicotiana tabacum HOM05D000535 ORTHO05D011982 8.6e-06 54.7 67 47.8


User provided reference genes

Program Settings