Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G762.7 Capsicum annuum HOM05D005463 ORTHO05D006900 2.5e-68 261.9 129 100.0
CAN.G1393.12 Capsicum annuum HOM05D005463 ORTHO05D006900 4.7e-30 134.8 75 90.7
Solyc01g086650.3 Solanum lycopersicum HOM05D005463 ORTHO05D006900 1.1e-26 123.6 75 85.3
Sopen01g033670 Solanum pennellii HOM05D005463 ORTHO05D006900 1.1e-26 123.6 75 85.3
PGSC0003DMG400025254 Solanum tuberosum HOM05D005463 ORTHO05D006900 1.1e-26 123.6 75 85.3
Peaxi162Scf00058g00512 Petunia axillaris HOM05D005463 ORTHO05D006900 3.1e-26 122.1 77 83.1
Nitab4.5_0006866g0010 Nicotiana tabacum HOM05D005463 ORTHO05D006900 5.4e-26 121.3 75 81.3
Nitab4.5_0002239g0050 Nicotiana tabacum HOM05D005463 ORTHO05D006900 9.2e-26 120.6 76 81.6
SGA_v2.0_scaffold4G02241 Striga asiatica HOM05D005463 ORTHO05D006900 5.9e-25 117.9 75 78.7
Dinv43913 Davidia involucrata HOM05D005463 ORTHO05D006900 7.8e-25 117.5 75 77.3
Dinv43914 Davidia involucrata HOM05D005463 ORTHO05D006900 7.8e-25 117.5 75 77.3
Oeu010361.1 Olea europaea HOM05D005463 ORTHO05D006900 1.3e-24 116.7 75 80.0
SGA_v2.0_scaffold95G28785 Striga asiatica HOM05D005463 ORTHO05D006900 6.6e-24 114.4 77 77.9
vmacro13633 Vaccinium macrocarpon HOM05D005463 ORTHO05D006900 1.1e-23 113.6 80 77.5
Actinidia32326 Actinidia chinensis HOM05D005463 ORTHO05D006900 2.5e-23 112.5 76 78.9
MSTRG.17019 Avicennia marina HOM05D005463 ORTHO05D006900 2.5e-23 112.5 75 73.3
Cpa.g.sc1133.2 Carica papaya HOM05D005463 ORTHO05D006900 4.3e-23 111.7 113 59.3
PGR083G1038 Punica granatum HOM05D005463 ORTHO05D006900 4.3e-23 111.7 102 62.7
Rhsim07G0052500 Rhododendron simsii HOM05D005463 ORTHO05D006900 4.3e-23 111.7 76 81.6
MSTRG.17060 Avicennia marina HOM05D005463 ORTHO05D006900 9.5e-23 110.5 75 73.3
Cfa010722 Carpinus fangiana HOM05D005463 ORTHO05D006900 9.5e-23 110.5 76 76.3
BcaB06g27564 Brassica carinata HOM05D005463 ORTHO05D006900 1.2e-22 110.2 75 76.0
BcaC02g08999 Brassica carinata HOM05D005463 ORTHO05D006900 1.2e-22 110.2 75 76.0
BolC4t26367H Brassica oleracea HOM05D005463 ORTHO05D006900 1.2e-22 110.2 75 76.0
Hma1.2p1_1089F.1_g255720 Hydrangea macrophylla HOM05D005463 ORTHO05D006900 1.2e-22 110.2 79 73.4
QL04p003263 Quercus lobata HOM05D005463 ORTHO05D006900 1.6e-22 109.8 77 75.3
SalBow4G1191 Salvia bowleyana HOM05D005463 ORTHO05D006900 1.6e-22 109.8 75 73.3
BcaB02g07924 Brassica carinata HOM05D005463 ORTHO05D006900 2.1e-22 109.4 75 74.7
Migut.B01346 Erythranthe guttata HOM05D005463 ORTHO05D006900 2.1e-22 109.4 75 73.3
Nn7g36051 Nelumbo nucifera HOM05D005463 ORTHO05D006900 2.1e-22 109.4 76 76.3
THA.LOC104819056 Tarenaya hassleriana HOM05D005463 ORTHO05D006900 2.1e-22 109.4 79 73.4
A04p13900 Brassica napus HOM05D005463 ORTHO05D006900 2.8e-22 109.0 75 74.7
C04p47660 Brassica napus HOM05D005463 ORTHO05D006900 2.8e-22 109.0 75 74.7
BraA04t17055Z Brassica rapa HOM05D005463 ORTHO05D006900 2.8e-22 109.0 75 74.7
Manes.07G002600 Manihot esculenta HOM05D005463 ORTHO05D006900 2.8e-22 109.0 76 72.4
Thecc.01G415300 Theobroma cacao HOM05D005463 ORTHO05D006900 2.8e-22 109.0 76 75.0
DCAR_006305 Daucus carota HOM05D005463 ORTHO05D006900 3.6e-22 108.6 78 75.6
CSS0012415 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 4.7e-22 108.2 77 76.6
CSS0041052 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 4.7e-22 108.2 77 76.6
ClCG09G003850 Citrullus lanatus HOM05D005463 ORTHO05D006900 4.7e-22 108.2 76 75.0
Thhalv10027799m.g Eutrema salsugineum HOM05D005463 ORTHO05D006900 4.7e-22 108.2 75 74.7
Sp7g01080 Schrenkiella parvula HOM05D005463 ORTHO05D006900 4.7e-22 108.2 75 74.7
Cc02_g27320 Coffea canephora HOM05D005463 ORTHO05D006900 6.1e-22 107.8 75 74.7
Haze_03251 Corylus avellana HOM05D005463 ORTHO05D006900 8.0e-22 107.5 76 75.0
Oeu047540.1 Olea europaea HOM05D005463 ORTHO05D006900 8.0e-22 107.5 76 72.4
AL7G48760 Arabidopsis lyrata HOM05D005463 ORTHO05D006900 1.4e-21 106.7 75 73.3
Carub.0007s3465 Capsella rubella HOM05D005463 ORTHO05D006900 1.4e-21 106.7 75 73.3
CiPaw.13G001800 Carya illinoinensis HOM05D005463 ORTHO05D006900 1.4e-21 106.7 76 73.7
MELO3C023520.2 Cucumis melo HOM05D005463 ORTHO05D006900 1.4e-21 106.7 76 73.7
Lsat_1_v5_gn_4_46300 Lactuca sativa HOM05D005463 ORTHO05D006900 1.4e-21 106.7 77 74.0
Potri.001G226900 Populus trichocarpa HOM05D005463 ORTHO05D006900 1.4e-21 106.7 120 53.3
TAR623G0821 Trochodendron aralioides HOM05D005463 ORTHO05D006900 1.4e-21 106.7 77 72.7
CsaV3_7G031380 Cucumis sativus L. HOM05D005463 ORTHO05D006900 1.8e-21 106.3 76 73.7
Manes.10G148700 Manihot esculenta HOM05D005463 ORTHO05D006900 1.8e-21 106.3 76 72.4
AT5G40850 Arabidopsis thaliana HOM05D005463 ORTHO05D006900 3.0e-21 105.5 75 72.0
CANSAT11G2548 Cannabis sativa HOM05D005463 ORTHO05D006900 5.2e-21 104.8 80 70.0
Glyma.15G270200 Glycine max HOM05D005463 ORTHO05D006900 6.8e-21 104.4 75 74.7
TWI74G0716 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 6.8e-21 104.4 80 71.2
Eucgr.H00541 Eucalyptus grandis HOM05D005463 ORTHO05D006900 8.9e-21 104.0 75 69.3
Prupe.2G005900 Prunus persica HOM05D005463 ORTHO05D006900 8.9e-21 104.0 73 75.3
Sabra16G0135300 Salix brachista HOM05D005463 ORTHO05D006900 8.9e-21 104.0 79 65.8
CARHR213670 Cardamine hirsuta HOM05D005463 ORTHO05D006900 1.2e-20 103.6 77 71.4
Lj7A567T29 Lonicera japonica HOM05D005463 ORTHO05D006900 1.2e-20 103.6 77 72.7
MD07G1002800 Malus domestica HOM05D005463 ORTHO05D006900 1.2e-20 103.6 75 74.7
RcHm_v2.0_Chr1g0314251 Rosa chinensis HOM05D005463 ORTHO05D006900 1.2e-20 103.6 79 69.6
Sc20g0006350 Simmondsia chinensis HOM05D005463 ORTHO05D006900 1.5e-20 103.2 75 72.0
GSVIVG01032030001 Vitis vinifera HOM05D005463 ORTHO05D006900 1.5e-20 103.2 78 70.5
arahy.Tifrunner.gnm1.ann1.35ND81 Arachis hypogaea HOM05D005463 ORTHO05D006900 2.0e-20 102.8 78 70.5
AUR62034961 Chenopodium quinoa HOM05D005463 ORTHO05D006900 2.0e-20 102.8 75 72.0
ATR0709G016 Amborella trichopoda HOM05D005463 ORTHO05D006900 2.6e-20 102.4 74 66.2
RcHm_v2.0_Chr6g0277781 Rosa chinensis HOM05D005463 ORTHO05D006900 2.6e-20 102.4 77 71.4
TWI77G0271 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 2.6e-20 102.4 80 70.0
AUR62035771 Chenopodium quinoa HOM05D005463 ORTHO05D006900 3.4e-20 102.1 75 72.0
unitig_61.g26444 Utricularia gibba HOM05D005463 ORTHO05D006900 4.4e-20 101.7 112 55.4
Ciclev10031826m.g Citrus clementina HOM05D005463 ORTHO05D006900 5.7e-20 101.3 76 69.7
COL.COLO4_23908 Corchorus olitorius HOM05D000259 ORTHO05D000155 5.7e-20 101.3 59 83.1
Duzib114G0804 Durio zibethinus HOM05D005463 ORTHO05D006900 5.7e-20 101.3 76 72.4
Phvul.005G038200 Phaseolus vulgaris HOM05D005463 ORTHO05D006900 5.7e-20 101.3 77 70.1
Sed0008391 Sechium edule HOM05D005463 ORTHO05D006900 5.7e-20 101.3 75 72.0
Ah.05g166840 Amaranthus hybridus HOM05D005463 ORTHO05D006900 9.8e-20 100.5 79 67.1
Ca_22203_v3 Cicer arietinum L. HOM05D005463 ORTHO05D006900 9.8e-20 100.5 77 68.8
Glyma.08G150800 Glycine max HOM05D005463 ORTHO05D006900 9.8e-20 100.5 75 73.3
VMungo1080G0018 Vigna mungo HOM05D005463 ORTHO05D006900 9.8e-20 100.5 77 70.1
Lj3g0018047 Lotus japonicus HOM05D005463 ORTHO05D006900 1.3e-19 100.1 77 68.8
PSO541G2837 Papaver somniferum HOM05D005463 ORTHO05D006900 1.3e-19 100.1 77 70.1
Gohir.A10G063300 Gossypium hirsutum HOM05D005463 ORTHO05D006900 1.7e-19 99.8 76 69.7
Gohir.D10G064800 Gossypium hirsutum HOM05D005463 ORTHO05D006900 1.7e-19 99.8 76 69.7
Psat5g207280 Pisum sativum HOM05D005463 ORTHO05D006900 1.7e-19 99.8 77 68.8
CBR_g4488 Chara braunii HOM05D005463 ORTHO05D006900 2.2e-19 99.4 74 68.9
EL10Ac1g02324 Beta vulgaris HOM05D005463 ORTHO05D006900 2.9e-19 99.0 76 69.7
Gorai.011G068800 Gossypium raimondii HOM05D005463 ORTHO05D006900 2.9e-19 99.0 76 69.7
MBI07_g21780_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 2.9e-19 99.0 78 69.2
MBI19_g42082_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 2.9e-19 99.0 78 69.2
FvH4_7g00480 Fragaria vesca HOM05D005463 ORTHO05D006900 4.9e-19 98.2 80 66.2
FAN03G0244 Fragaria x ananassa HOM05D005463 ORTHO05D006900 4.9e-19 98.2 80 66.2
FAN06G3192 Fragaria x ananassa HOM05D005463 ORTHO05D006900 4.9e-19 98.2 80 66.2
FAN10G2111 Fragaria x ananassa HOM05D005463 ORTHO05D006900 4.9e-19 98.2 80 66.2
Lalb_Chr25g0283441 Lupinus albus HOM05D005463 ORTHO05D006900 4.9e-19 98.2 121 50.4
Medtr3g026780 Medicago truncatula HOM05D005463 ORTHO05D006900 6.4e-19 97.8 77 68.8
TAR369G0415 Trochodendron aralioides HOM05D005463 ORTHO05D006900 1.4e-18 96.7 77 67.5
Zm00001eb159150 Zea mays HOM05D005463 ORTHO05D006900 1.4e-18 96.7 75 69.3
Zm00001eb358930 Zea mays HOM05D005463 ORTHO05D006900 1.8e-18 96.3 73 67.1
Aa31sc48G90 Aethionema arabicum HOM05D005463 ORTHO05D006900 4.1e-18 95.1 76 65.8
Medtr7g034345 Medicago truncatula HOM05D005463 ORTHO05D006900 4.1e-18 95.1 77 66.2
HanXRQChr16g0520501 Helianthus annuus HOM05D005463 ORTHO05D006900 5.4e-18 94.7 56 82.1
ATR1100G030 Amborella trichopoda HOM05D005463 ORTHO05D006900 7.0e-18 94.4 71 64.8
TPR.G12169 Trifolium pratense HOM05D005463 ORTHO05D006900 7.0e-18 94.4 77 66.2
CDE09G0814 Ceratophyllum demersum HOM05D005463 ORTHO05D006900 9.2e-18 94.0 58 81.0
Aqoxy2G00060 Aquilegia oxysepala HOM05D005463 ORTHO05D006900 1.6e-17 93.2 102 55.9
Mapoly0087s0054 Marchantia polymorpha HOM05D005463 ORTHO05D006900 1.6e-17 93.2 72 68.1
AagrBONN_evm.TU.Sc2ySwM_344.3224 Anthoceros agrestis HOM05D005463 ORTHO05D006900 2.0e-17 92.8 73 61.6
ECA234G3252 Erigeron canadensis HOM05D005463 ORTHO05D006900 3.5e-17 92.0 56 76.8
Duzib138G0896 Durio zibethinus HOM05D005463 ORTHO05D006900 7.8e-17 90.9 67 68.7
SEGI_24059 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 1.0e-16 90.5 80 61.2
Prupe.I005100 Prunus persica HOM05D005463 ORTHO05D006900 1.3e-16 90.1 60 76.7
Hund11459 Selenicereus undatus HOM05D005463 ORTHO05D006900 3.0e-16 89.0 75 65.3
Pp3c10_8730 Physcomitrium patens HOM05D005463 ORTHO05D006900 5.0e-16 88.2 66 62.1
MBI19_g47932_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 8.6e-16 87.4 72 66.7
Cre09.g396401 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D006900 1.1e-15 87.0 65 63.1
HPP92_020287 Vanilla planifolia HOM05D005463 ORTHO05D006900 4.3e-15 85.1 69 68.1
SMO174G0240 Selaginella moellendorffii HOM05D005463 ORTHO05D006900 1.1e-13 80.5 58 65.5
PRCOL_00005728 Prasinoderma coloniale HOM05D005463 ORTHO05D006900 4.0e-13 78.6 73 57.5
TPR.G33976 Trifolium pratense HOM05D005463 ORTHO05D006900 4.0e-13 78.6 75 58.7
MCO12G109 Micromonas commoda HOM05D005463 ORTHO05D006900 2.6e-12 75.9 63 58.7
MBI10_g23170_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 2.1e-06 56.2 39 71.8
Cre12.g538650 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D044100 8.1e-06 54.3 73 39.7


User provided reference genes

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