Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G756.38 Capsicum annuum HOM05D007841 ORTHO05D009919 2.0e-33 145.2 73 100.0
Solyc01g088770.3 Solanum lycopersicum HOM05D007841 ORTHO05D009919 1.2e-30 136.0 73 90.4
Sopen01g035610 Solanum pennellii HOM05D007841 ORTHO05D009919 1.2e-30 136.0 73 90.4
PGSC0003DMG400001726 Solanum tuberosum HOM05D007841 ORTHO05D009919 1.2e-30 136.0 73 90.4
Hma1.2p1_2138F.1_g314930 Hydrangea macrophylla HOM05D007841 ORTHO05D009919 1.5e-28 129.0 73 86.3
Oeu034848.1 Olea europaea HOM05D007841 ORTHO05D009919 3.2e-28 127.9 71 88.7
EL10Ac1g00736 Beta vulgaris HOM05D007841 ORTHO05D009919 2.1e-27 125.2 70 87.1
HanXRQChr01g0019691 Helianthus annuus HOM05D007841 ORTHO05D009919 4.7e-27 124.0 73 83.6
Prupe.2G120100 Prunus persica HOM05D007841 ORTHO05D009919 6.1e-27 123.6 70 84.3
Actinidia30942 Actinidia chinensis HOM05D007841 ORTHO05D009919 8.0e-27 123.2 73 83.6
Migut.N01723 Erythranthe guttata HOM05D007841 ORTHO05D009919 8.0e-27 123.2 73 84.9
CiPaw.14G018000 Carya illinoinensis HOM05D007841 ORTHO05D009919 2.3e-26 121.7 70 85.7
Cc02_g25410 Coffea canephora HOM05D007841 ORTHO05D009919 4.0e-26 120.9 70 81.4
Glyma.08G340600 Glycine max HOM05D007841 ORTHO05D009919 4.0e-26 120.9 70 84.3
PGR004G1954 Punica granatum HOM05D007841 ORTHO05D009919 6.8e-26 120.2 72 83.3
Atru.chr5.91 Acer truncatum HOM05D007841 ORTHO05D009919 8.8e-26 119.8 66 87.9
RcHm_v2.0_Chr1g0345181 Rosa chinensis HOM05D007841 ORTHO05D009919 8.8e-26 119.8 73 79.5
Phvul.008G138900 Phaseolus vulgaris HOM05D007841 ORTHO05D009919 1.2e-25 119.4 70 82.9
ECA248G0141 Erigeron canadensis HOM05D007841 ORTHO05D009919 1.5e-25 119.0 72 81.9
Lsat_1_v5_gn_1_83981 Lactuca sativa HOM05D007841 ORTHO05D009919 2.0e-25 118.6 72 81.9
Gohir.D12G101400 Gossypium hirsutum HOM05D007841 ORTHO05D009919 3.4e-25 117.9 70 81.4
Gorai.008G110500 Gossypium raimondii HOM05D007841 ORTHO05D009919 3.4e-25 117.9 70 81.4
Psat3g152880 Pisum sativum HOM05D007841 ORTHO05D009919 3.4e-25 117.9 70 82.9
AL1G10060 Arabidopsis lyrata HOM05D007841 ORTHO05D009919 4.4e-25 117.5 70 82.9
Duzib138G1421 Durio zibethinus HOM05D007841 ORTHO05D009919 4.4e-25 117.5 70 81.4
Lj1g0014858 Lotus japonicus HOM05D007841 ORTHO05D009919 4.4e-25 117.5 70 81.4
AT1G02160 Arabidopsis thaliana HOM05D007841 ORTHO05D009919 7.5e-25 116.7 71 81.7
Medtr7g050540 Medicago truncatula HOM05D007841 ORTHO05D009919 7.5e-25 116.7 70 81.4
Carub.0001s0004 Capsella rubella HOM05D007841 ORTHO05D009919 9.8e-25 116.3 70 82.9
THA.LOC104814059 Tarenaya hassleriana HOM05D007841 ORTHO05D009919 9.8e-25 116.3 68 83.8
CANSAT25G3347 Cannabis sativa HOM05D007841 ORTHO05D009919 1.3e-24 115.9 64 85.9
CANSAT25G3825 Cannabis sativa HOM05D007841 ORTHO05D009919 1.3e-24 115.9 64 85.9
Thhalv10009237m.g Eutrema salsugineum HOM05D007841 ORTHO05D009919 1.3e-24 115.9 73 79.5
PSO675G0834 Papaver somniferum HOM05D007841 ORTHO05D009919 1.3e-24 115.9 66 81.8
COL.COLO4_12370 Corchorus olitorius HOM05D007841 ORTHO05D009919 1.7e-24 115.5 70 81.4
Potri.014G051850 Populus trichocarpa HOM05D007841 ORTHO05D009919 1.7e-24 115.5 70 81.4
BcaB03g13636 Brassica carinata HOM05D000300 ORTHO05D000383 2.2e-24 115.2 73 79.5
Gohir.A12G098200 Gossypium hirsutum HOM05D007841 ORTHO05D009919 2.8e-24 114.8 70 78.6
MD02G1221100 Malus domestica HOM05D007841 ORTHO05D009919 2.8e-24 114.8 66 83.3
PSO732G0215 Papaver somniferum HOM05D007841 ORTHO05D009919 3.7e-24 114.4 73 74.0
arahy.Tifrunner.gnm1.ann1.K94MSK Arachis hypogaea HOM05D007841 ORTHO05D009919 4.9e-24 114.0 71 77.5
CARHR000160 Cardamine hirsuta HOM05D007841 ORTHO05D009919 4.9e-24 114.0 65 86.2
Manes.05G057100 Manihot esculenta HOM05D007841 ORTHO05D009919 4.9e-24 114.0 64 85.9
Thecc.01G400700 Theobroma cacao HOM05D007841 ORTHO05D009919 4.9e-24 114.0 74 81.1
Eucgr.D01199 Eucalyptus grandis HOM05D007841 ORTHO05D009919 6.3e-24 113.6 70 80.0
C05p00040 Brassica napus HOM05D007841 ORTHO05D009919 8.3e-24 113.2 73 78.1
BolC5t28791H Brassica oleracea HOM05D007841 ORTHO05D009919 8.3e-24 113.2 73 78.1
Lalb_Chr03g0040951 Lupinus albus HOM05D007841 ORTHO05D009919 1.8e-23 112.1 70 78.6
Nitab4.5_0004425g0050 Nicotiana tabacum HOM05D007841 ORTHO05D009919 1.8e-23 112.1 67 80.6
Aqoxy7G00835 Aquilegia oxysepala HOM05D007841 ORTHO05D009919 2.4e-23 111.7 64 85.9
MD07G1096500 Malus domestica HOM05D007841 ORTHO05D009919 3.1e-23 111.3 66 83.3
CsaV3_3G010620 Cucumis sativus L. HOM05D007841 ORTHO05D009919 5.4e-23 110.5 74 77.0
Sed0011386 Sechium edule HOM05D007841 ORTHO05D009919 5.4e-23 110.5 64 84.4
Peaxi162Scf00793g00363 Petunia axillaris HOM05D007841 ORTHO05D009919 1.2e-22 109.4 57 89.5
ClCG05G003010 Citrullus lanatus HOM05D007841 ORTHO05D009919 1.0e-21 106.3 63 81.0
unitig_22.g6702 Utricularia gibba HOM05D007841 ORTHO05D009919 1.3e-21 105.9 74 73.0
FvH4_7g09140 Fragaria vesca HOM05D007841 ORTHO05D009919 1.7e-21 105.5 71 74.6
GSVIVG01018320001 Vitis vinifera HOM05D007841 ORTHO05D009919 5.0e-21 104.0 70 77.1
Os04g0665000 Oryza sativa ssp. japonica HOM05D007841 ORTHO05D009919 1.1e-20 102.8 63 82.5
FAN06G3108 Fragaria x ananassa HOM05D007841 ORTHO05D009919 4.2e-20 100.9 68 73.5
Zm00001eb067220 Zea mays HOM05D007841 ORTHO05D009919 7.2e-20 100.1 63 81.0
Haze_02887 Corylus avellana HOM05D000061 ORTHO05D000915 1.6e-19 99.0 58 75.9
Hund17114 Selenicereus undatus HOM05D007841 ORTHO05D009919 6.1e-19 97.1 54 81.5
CSS0006405 Camellia sinensis var. sinensis HOM05D007841 ORTHO05D009919 1.4e-18 95.9 57 77.2
SalBow4G0679 Salvia bowleyana HOM05D007841 ORTHO05D009919 2.3e-18 95.1 57 71.9
arahy.Tifrunner.gnm1.ann1.X5EUJ4 Arachis hypogaea HOM05D007841 ORTHO05D009919 2.0e-17 92.0 56 76.8
PSO732G0130 Papaver somniferum HOM05D007841 ORTHO05D009919 3.4e-17 91.3 49 81.6
Ciclev10023064m.g Citrus clementina HOM05D007841 ORTHO05D009919 4.4e-17 90.9 50 84.0
Sc02g0003210 Simmondsia chinensis HOM05D007841 ORTHO05D009919 5.7e-17 90.5 59 78.0
BraA10t42285Z Brassica rapa HOM05D007841 ORTHO05D009919 7.5e-17 90.1 49 85.7
Sp1g00090 Schrenkiella parvula HOM05D007841 ORTHO05D009919 7.5e-17 90.1 57 75.4
Nn6g33742 Nelumbo nucifera HOM05D007841 ORTHO05D009919 2.8e-16 88.2 48 81.2
AUR62023385 Chenopodium quinoa HOM05D007841 ORTHO05D009919 4.9e-16 87.4 54 75.9
AUR62013771 Chenopodium quinoa HOM05D007841 ORTHO05D009919 6.3e-16 87.0 54 74.1
FAN01G1055 Fragaria x ananassa HOM05D007841 ORTHO05D009919 9.2e-15 83.2 55 72.7
FAN03G2201 Fragaria x ananassa HOM05D007841 ORTHO05D009919 9.2e-15 83.2 55 72.7
Pp3c22_2080 Physcomitrium patens HOM05D007841 ORTHO05D009919 4.6e-14 80.9 57 68.4
Sabra14G0036700 Salix brachista HOM05D007841 ORTHO05D009919 5.0e-13 77.4 41 92.7
Aa31LG1G11570 Aethionema arabicum HOM05D007841 ORTHO05D009919 1.5e-12 75.9 48 77.1
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 9.5e-12 73.2 45 80.0
Mapoly0181s0011 Marchantia polymorpha HOM05D007841 ORTHO05D009919 2.3e-10 68.6 59 54.2
AagrBONN_evm.TU.Sc2ySwM_228.3132 Anthoceros agrestis HOM05D007841 ORTHO05D009919 3.1e-10 68.2 53 62.3
Actinidia05779 Actinidia chinensis HOM05D007841 ORTHO05D009919 1.2e-09 66.2 33 87.9
CAN.G756.35 Capsicum annuum HOM05D007841 ORTHO05D009919 4.4e-09 64.3 46 73.9


User provided reference genes

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