Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G756.22 Capsicum annuum HOM05D007595 ORTHO05D009570 6.0e-156 555.8 907 100.0
Sopen01g035520 Solanum pennellii HOM05D007595 ORTHO05D009570 1.8e-123 448.0 273 82.4
Peaxi162Scf00793g00032 Petunia axillaris HOM05D007595 ORTHO05D009570 3.1e-112 410.6 269 77.3
Nitab4.5_0000563g0010 Nicotiana tabacum HOM05D007595 ORTHO05D009570 1.5e-106 391.7 260 76.9
PGSC0003DMG400001689 Solanum tuberosum HOM05D007595 ORTHO05D009570 1.0e-70 272.7 145 90.3
CiPaw.13G022600 Carya illinoinensis HOM05D007595 ORTHO05D009570 1.3e-70 272.3 241 58.1
Cfa011030 Carpinus fangiana HOM05D007595 ORTHO05D009570 3.6e-68 264.2 235 58.7
vmacro09088 Vaccinium macrocarpon HOM05D007595 ORTHO05D009570 1.4e-67 262.3 279 54.5
QL04p026468 Quercus lobata HOM05D007595 ORTHO05D009570 2.3e-67 261.5 277 52.3
Duzib138G0502 Durio zibethinus HOM05D007595 ORTHO05D009570 8.9e-67 259.6 282 51.1
Rhsim05G0178700 Rhododendron simsii HOM05D007595 ORTHO05D009570 9.8e-66 256.1 275 50.9
Ciclev10018805m.g Citrus clementina HOM05D007595 ORTHO05D009570 9.2e-64 249.6 269 51.3
FAN08G2497 Fragaria x ananassa HOM05D007595 ORTHO05D009570 7.8e-63 246.5 208 58.2
Sc22g0000140 Simmondsia chinensis HOM05D007595 ORTHO05D009570 1.0e-62 246.1 205 59.0
Sc22g0001280 Simmondsia chinensis HOM05D007595 ORTHO05D009570 1.0e-62 246.1 205 59.0
Potri.014G052800 Populus trichocarpa HOM05D007595 ORTHO05D009570 1.7e-62 245.4 261 49.8
TWI59G0156 Tripterygium wilfordii HOM05D007595 ORTHO05D009570 1.7e-62 245.4 263 50.2
Nitab4.5_0004273g0020 Nicotiana tabacum HOM05D007595 ORTHO05D009570 3.0e-62 244.6 145 80.7
Gohir.A12G098700 Gossypium hirsutum HOM05D007595 ORTHO05D009570 5.0e-62 243.8 242 52.9
ClCG05G002930 Citrullus lanatus HOM05D007595 ORTHO05D009570 1.1e-61 242.7 256 48.8
Manes.01G274800 Manihot esculenta HOM05D007595 ORTHO05D009570 1.1e-61 242.7 253 52.6
FvH4_5g25080 Fragaria vesca HOM05D007595 ORTHO05D009570 4.3e-61 240.7 208 57.2
Sabra14G0039800 Salix brachista HOM05D007595 ORTHO05D009570 4.3e-61 240.7 244 50.8
Atru.chr5.81 Acer truncatum HOM05D007595 ORTHO05D009570 8.1e-60 236.5 282 47.5
Lj9C550T12 Lonicera japonica HOM05D007595 ORTHO05D009570 1.4e-59 235.7 170 64.7
Lsat_1_v5_gn_4_38381 Lactuca sativa HOM05D007595 ORTHO05D009570 8.9e-59 233.0 240 52.1
CANSAT25G1659 Cannabis sativa HOM05D007595 ORTHO05D009570 1.2e-58 232.6 209 54.1
CsaV3_3G010510 Cucumis sativus L. HOM05D007595 ORTHO05D009570 3.4e-58 231.1 238 50.0
MELO3C006272.2 Cucumis melo HOM05D007595 ORTHO05D009570 7.5e-58 229.9 238 50.0
Prupe.1G180300 Prunus persica HOM05D007595 ORTHO05D009570 1.3e-57 229.2 239 49.8
Lalb_Chr16g0384971 Lupinus albus HOM05D007595 ORTHO05D009570 2.9e-57 228.0 222 55.0
Sed0013429 Sechium edule HOM05D007595 ORTHO05D009570 3.2e-56 224.6 239 51.0
SHI13644 Sapria himalayana HOM05D007595 ORTHO05D009570 5.4e-56 223.8 218 53.7
Cc02_g25530 Coffea canephora HOM05D007595 ORTHO05D009570 9.2e-56 223.0 170 62.4
Lj1g0026949 Lotus japonicus HOM05D007595 ORTHO05D009570 1.6e-55 222.2 248 50.8
CANSAT54G2206 Cannabis sativa HOM05D007595 ORTHO05D009570 7.8e-55 219.9 216 50.5
VMungo0251G3282 Vigna mungo HOM05D007595 ORTHO05D009570 7.8e-55 219.9 250 48.4
Phvul.002G094300 Phaseolus vulgaris HOM05D007595 ORTHO05D009570 8.6e-54 216.5 239 50.2
Lalb_Chr05g0219501 Lupinus albus HOM05D007595 ORTHO05D009570 1.9e-53 215.3 241 51.0
Glyma.07G218100 Glycine max HOM05D007595 ORTHO05D009570 4.3e-53 214.2 233 49.8
CANSAT78G1456 Cannabis sativa HOM05D007595 ORTHO05D009570 5.6e-53 213.8 209 52.2
MSTRG.20666 Avicennia marina HOM05D007595 ORTHO05D009570 7.3e-53 213.4 217 49.8
Psat3g072800 Pisum sativum HOM05D007595 ORTHO05D009570 2.1e-52 211.8 226 50.4
Actinidia05786 Actinidia chinensis HOM05D003161 ORTHO05D009570 3.1e-51 208.0 145 70.3
SalBow5G3719 Salvia bowleyana HOM05D007595 ORTHO05D009570 3.1e-51 208.0 235 49.4
Hund27417 Selenicereus undatus HOM05D007595 ORTHO05D009570 2.6e-50 204.9 231 48.9
THA.LOC104811608 Tarenaya hassleriana HOM05D007595 ORTHO05D009570 2.6e-50 204.9 273 44.3
Migut.B01494 Erythranthe guttata HOM05D007595 ORTHO05D009570 3.4e-50 204.5 269 43.1
Dinv44032 Davidia involucrata HOM05D007595 ORTHO05D009570 5.8e-50 203.8 140 70.7
CSS0007679 Camellia sinensis var. sinensis HOM05D007595 ORTHO05D009570 2.2e-49 201.8 145 66.9
Medtr7g091470 Medicago truncatula HOM05D007595 ORTHO05D009570 3.2e-48 198.0 250 45.2
PGR042G2115 Punica granatum HOM05D007595 ORTHO05D009570 1.6e-47 195.7 198 51.5
SGA_v2.0_scaffold34G13580 Striga asiatica HOM05D007595 ORTHO05D009570 2.7e-47 194.9 257 43.2
Nn1g00708 Nelumbo nucifera HOM05D007595 ORTHO05D009570 1.0e-46 193.0 201 51.2
AUR62034666 Chenopodium quinoa HOM05D007595 ORTHO05D009570 1.7e-46 192.2 145 62.1
AUR62008574 Chenopodium quinoa HOM05D007595 ORTHO05D009570 3.0e-46 191.4 145 60.7
Haze_02895 Corylus avellana HOM05D007595 ORTHO05D009570 3.9e-46 191.0 145 62.8
Ah.08g212430 Amaranthus hybridus HOM05D007595 ORTHO05D009570 5.1e-46 190.7 145 62.8
HanXRQChr14g0457401 Helianthus annuus HOM05D007595 ORTHO05D009570 5.1e-46 190.7 214 47.2
COL.COLO4_12359 Corchorus olitorius HOM05D007595 ORTHO05D009570 7.3e-45 186.8 145 63.4
PSO675G4153 Papaver somniferum HOM05D007595 ORTHO05D009570 9.6e-45 186.4 229 47.2
PSO732G0412 Papaver somniferum HOM05D007595 ORTHO05D009570 1.6e-44 185.7 194 50.0
MBI04_g20744_MAGBIO Magnolia biondii HOM05D000404 ORTHO05D001765 4.7e-44 184.1 235 46.4
Solyc01g088670.3 Solanum lycopersicum HOM05D007595 ORTHO05D009570 6.2e-44 183.7 133 82.0
Oeu004640.1 Olea europaea HOM05D007595 ORTHO05D009570 1.1e-43 183.0 143 60.1
CDE04G2406 Ceratophyllum demersum HOM05D007595 ORTHO05D009570 5.2e-43 180.6 206 45.1
PSO732G0035 Papaver somniferum HOM05D007595 ORTHO05D009570 5.2e-43 180.6 214 46.3
Aqoxy7G02148 Aquilegia oxysepala HOM05D007595 ORTHO05D009570 8.9e-43 179.9 236 45.8
MD02G1222500 Malus domestica HOM05D007595 ORTHO05D009570 8.9e-43 179.9 145 60.7
RcHm_v2.0_Chr7g0215291 Rosa chinensis HOM05D007595 ORTHO05D009570 5.8e-42 177.2 145 57.9
EL10Ac7g17423 Beta vulgaris HOM05D007595 ORTHO05D009570 1.3e-41 176.0 145 57.9
RcHm_v2.0_Chr4g0407101 Rosa chinensis HOM05D007595 ORTHO05D009570 4.6e-39 167.5 145 55.9
Ca_08452_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 5.1e-38 164.1 148 54.7
Ca_08455_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 5.1e-38 164.1 148 54.7
TAR629G2414 Trochodendron aralioides HOM05D007595 ORTHO05D009570 2.8e-36 158.3 127 59.1
DCAR_029507 Daucus carota HOM05D007595 ORTHO05D009570 1.8e-35 155.6 149 51.7
Rhsim07G0038800 Rhododendron simsii HOM05D007595 ORTHO05D009570 6.4e-33 147.1 105 70.5
Aa31LG1G28920 Aethionema arabicum HOM05D007595 ORTHO05D009570 3.0e-30 138.3 105 64.8
Glyma.20G014500 Glycine max HOM05D007595 ORTHO05D009570 4.0e-27 127.9 102 57.8
Thecc.01G401700 Theobroma cacao HOM05D007595 ORTHO05D009570 1.6e-23 115.9 78 71.8
ECA234G2641 Erigeron canadensis HOM05D007595 ORTHO05D009570 1.9e-21 109.0 116 46.6
Gohir.D12G101900 Gossypium hirsutum HOM05D007595 ORTHO05D009570 4.3e-21 107.8 78 67.9
TPR.G3705 Trifolium pratense HOM05D007595 ORTHO05D009570 1.5e-18 99.4 76 63.2
Cpa.g.sc52.75 Carica papaya HOM05D007595 ORTHO05D009570 3.4e-18 98.2 88 51.1
MD07G1093100 Malus domestica HOM05D007595 ORTHO05D009570 3.8e-17 94.7 121 41.3
RcHm_v2.0_Chr4g0407111 Rosa chinensis HOM05D007595 ORTHO05D009570 4.2e-16 91.3 115 40.9
FAN18G0104 Fragaria x ananassa HOM05D007595 ORTHO05D009570 2.7e-15 88.6 115 40.9
Sabra14G0039700 Salix brachista HOM05D007595 ORTHO05D009570 1.0e-14 86.7 89 47.2
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 2.5e-13 82.0 145 34.5
Gorai.008G111100 Gossypium raimondii HOM05D007595 ORTHO05D009570 2.5e-13 82.0 80 47.5
HPP92_014879 Vanilla planifolia HOM05D007595 ORTHO05D009570 3.7e-12 78.2 106 39.6
GSVIVG01018339001 Vitis vinifera HOM05D007595 ORTHO05D009570 1.2e-10 73.2 48 68.8
Zm00001eb224150 Zea mays HOM05D011046 ORTHO05D013342 7.2e-08 63.9 104 40.4
Migut.I00272 Erythranthe guttata HOM05D007595 ORTHO05D009570 1.2e-07 63.2 93 40.9
CSS0047431 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 4.6e-07 61.2 188 25.0
Cc11_g12050 Coffea canephora HOM05D007595 ORTHO05D009570 4.6e-07 61.2 41 65.9
CSS0045109 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 1.0e-06 60.1 184 25.0
Zm00001eb367370 Zea mays HOM05D011046 ORTHO05D013342 1.0e-06 60.1 105 41.0
Eucgr.D01185 Eucalyptus grandis HOM05D007595 ORTHO05D009570 5.1e-06 57.8 52 53.8
ATR0665G577 Amborella trichopoda HOM05D007595 ORTHO05D009570 8.7e-06 57.0 102 45.1


User provided reference genes

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