Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 2.7e-155 552.0 282 100.0
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 5.7e-97 358.2 186 94.1
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 7.4e-97 357.8 186 94.1
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 3.7e-96 355.5 188 93.1
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 8.2e-96 354.4 188 92.6
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 1.0e-93 347.4 186 91.9
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 5.2e-90 335.1 186 88.2
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 4.4e-89 332.0 186 87.1
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 5.7e-89 331.6 186 87.1
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 2.8e-88 329.3 184 85.9
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 1.4e-87 327.0 186 83.3
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 2.4e-87 326.2 185 85.4
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 4.1e-87 325.5 184 84.8
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 5.4e-87 325.1 184 84.8
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 7.0e-87 324.7 186 84.9
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 9.1e-87 324.3 186 85.5
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 1.6e-86 323.6 186 82.8
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 3.5e-86 322.4 186 83.9
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 5.9e-86 321.6 183 85.2
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 1.7e-85 320.1 184 83.2
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 2.2e-85 319.7 186 82.8
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 2.2e-85 319.7 184 83.2
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 2.9e-85 319.3 186 83.3
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 2.9e-85 319.3 184 83.2
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 3.8e-85 318.9 186 82.3
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 5.0e-85 318.5 186 82.3
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 5.0e-85 318.5 186 82.3
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 6.5e-85 318.2 186 82.8
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 8.5e-85 317.8 190 82.6
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 8.5e-85 317.8 186 83.3
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 8.5e-85 317.8 186 83.3
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 8.5e-85 317.8 184 82.1
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 1.1e-84 317.4 186 81.7
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 1.5e-84 317.0 184 82.6
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.5e-84 317.0 186 81.7
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.9e-84 316.6 186 81.2
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.9e-84 316.6 186 81.7
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 1.9e-84 316.6 184 81.0
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 2.5e-84 316.2 186 82.8
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 2.5e-84 316.2 186 81.7
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 2.5e-84 316.2 186 81.7
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 3.2e-84 315.8 186 81.7
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 3.2e-84 315.8 186 82.3
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 4.2e-84 315.5 184 83.2
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 4.2e-84 315.5 184 81.0
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 4.2e-84 315.5 186 82.3
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 5.5e-84 315.1 186 81.2
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 5.5e-84 315.1 186 81.2
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 5.5e-84 315.1 186 81.7
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 7.2e-84 314.7 184 81.5
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 7.2e-84 314.7 186 82.3
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 7.2e-84 314.7 186 81.2
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 1.2e-83 313.9 186 82.3
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 1.6e-83 313.5 184 82.1
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 1.6e-83 313.5 186 82.3
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 1.6e-83 313.5 184 81.0
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 2.1e-83 313.2 184 82.1
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 2.7e-83 312.8 186 81.2
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 3.6e-83 312.4 188 81.9
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 4.7e-83 312.0 179 84.4
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 4.7e-83 312.0 179 84.4
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 4.7e-83 312.0 184 82.1
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 4.7e-83 312.0 184 80.4
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 8.0e-83 311.2 186 80.6
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 8.0e-83 311.2 186 80.6
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 1.0e-82 310.8 184 79.3
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 1.8e-82 310.1 183 80.9
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 1.8e-82 310.1 182 81.3
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 2.3e-82 309.7 184 79.9
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 3.0e-82 309.3 180 82.2
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 3.0e-82 309.3 186 80.6
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 3.0e-82 309.3 186 80.1
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 4.0e-82 308.9 174 83.9
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 4.0e-82 308.9 184 81.0
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 1.5e-81 307.0 183 81.4
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 2.0e-81 306.6 183 80.9
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 2.6e-81 306.2 183 80.9
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 2.6e-81 306.2 183 80.9
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 2.6e-81 306.2 184 79.3
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 2.6e-81 306.2 186 80.1
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 3.4e-81 305.8 186 80.1
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 3.4e-81 305.8 179 83.2
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 3.4e-81 305.8 179 83.2
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 7.5e-81 304.7 183 80.3
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 7.5e-81 304.7 183 80.3
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 1.3e-80 303.9 186 78.5
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 2.2e-80 303.1 181 79.6
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 3.7e-80 302.4 183 79.2
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 4.9e-80 302.0 183 78.7
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 4.9e-80 302.0 183 79.2
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 4.9e-80 302.0 183 78.7
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 4.9e-80 302.0 183 78.7
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 6.3e-80 301.6 182 78.6
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 6.3e-80 301.6 186 77.4
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 1.1e-79 300.8 185 76.8
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 1.8e-79 300.1 183 78.1
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 1.8e-79 300.1 181 80.7
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 2.4e-79 299.7 184 78.3
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 3.1e-79 299.3 185 78.4
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 3.1e-79 299.3 183 78.7
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 4.1e-79 298.9 190 76.3
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 5.4e-79 298.5 183 78.1
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 1.6e-78 297.0 183 76.5
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 1.6e-78 297.0 183 76.5
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 2.0e-78 296.6 186 78.5
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 3.5e-78 295.8 183 76.5
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 3.5e-78 295.8 183 76.5
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 1.7e-77 293.5 176 78.4
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 8.6e-77 291.2 187 76.5
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 1.2e-75 287.3 180 75.0
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 1.6e-75 287.0 173 79.8
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 6.1e-75 285.0 183 74.9
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 3.0e-74 282.7 180 75.6
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 4.4e-73 278.9 185 73.0
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 3.7e-72 275.8 183 74.3
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 4.9e-72 275.4 201 65.2
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 1.4e-71 273.9 186 71.0
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 4.1e-71 272.3 178 72.5
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 1.6e-70 270.4 158 83.5
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 1.3e-69 267.3 184 72.3
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 8.0e-67 258.1 149 83.2
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 1.0e-61 241.1 182 62.6
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 3.9e-53 212.6 182 62.6
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 8.1e-51 204.9 180 57.8
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 4.4e-49 199.1 177 53.7
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 6.4e-48 195.3 194 53.6
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.4e-42 177.6 101 84.2
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.4e-42 176.8 102 82.4
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 5.2e-42 175.6 100 84.0
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.6e-41 173.3 100 83.0
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.1e-39 167.9 97 82.5
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 5.1e-37 159.1 187 44.4
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 3.8e-32 142.9 83 83.1
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 6.6e-29 132.1 76 85.5
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 9.9e-25 118.2 185 42.2
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 6.0e-22 109.0 66 78.8
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 8.7e-21 105.1 97 58.8
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 5.1e-13 79.3 42 81.0
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 2.5e-07 60.5 40 77.5


User provided reference genes

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