Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G745.17 Capsicum annuum HOM05D007535 ORTHO05D008520 4.7e-176 621.7 480 100.0
Sopen11g027410 Solanum pennellii HOM05D007535 ORTHO05D008520 2.3e-122 443.4 519 79.0
Solyc11g068690.2 Solanum lycopersicum HOM05D007535 ORTHO05D008520 1.1e-121 441.0 519 78.6
PGSC0003DMG400026347 Solanum tuberosum HOM05D007535 ORTHO05D008520 1.3e-120 437.6 517 79.3
Nitab4.5_0000731g0020 Nicotiana tabacum HOM05D007535 ORTHO05D008520 2.0e-86 323.9 495 72.1
Nitab4.5_0008177g0030 Nicotiana tabacum HOM05D007535 ORTHO05D008520 1.9e-84 317.4 497 70.4
Peaxi162Scf00224g00216 Petunia axillaris HOM05D007535 ORTHO05D008520 3.6e-83 313.2 517 67.9
vmacro03328 Vaccinium macrocarpon HOM05D007535 ORTHO05D008520 4.1e-39 166.8 510 39.6
Actinidia07260 Actinidia chinensis HOM05D007535 ORTHO05D008520 5.4e-39 166.4 503 51.1
Thecc.09G278200 Theobroma cacao HOM05D007535 ORTHO05D008520 1.6e-38 164.9 504 45.6
Prupe.6G137100 Prunus persica HOM05D007535 ORTHO05D008520 2.7e-38 164.1 504 54.0
SGA_v2.0_scaffold177G39436 Striga asiatica HOM05D007535 ORTHO05D008520 3.5e-38 163.7 494 50.0
Nn6g34805 Nelumbo nucifera HOM05D007535 ORTHO05D008520 1.3e-37 161.8 453 57.0
PSO384G1635 Papaver somniferum HOM05D007535 ORTHO05D008520 5.1e-37 159.8 489 49.3
Psat5g257880 Pisum sativum HOM05D007535 ORTHO05D008520 2.5e-36 157.5 492 50.4
Rhsim13G0113500 Rhododendron simsii HOM05D000001 ORTHO05D000003 4.7e-35 153.3 529 34.8
TAR633G1755 Trochodendron aralioides HOM05D007535 ORTHO05D008520 5.2e-34 149.8 501 54.3
Cc00_g20950 Coffea canephora HOM05D007535 ORTHO05D008520 6.8e-34 149.4 488 55.3
Migut.N02473 Erythranthe guttata HOM05D007535 ORTHO05D008520 8.9e-34 149.1 488 54.3
MD03G1150100 Malus domestica HOM05D007535 ORTHO05D008520 7.6e-33 146.0 487 54.0
Medtr2g086950 Medicago truncatula HOM05D007535 ORTHO05D008520 1.7e-32 144.8 492 52.6
RcHm_v2.0_Chr5g0046091 Rosa chinensis HOM05D007535 ORTHO05D008520 3.8e-32 143.7 490 54.7
DCAR_024892 Daucus carota HOM05D007535 ORTHO05D008520 6.4e-32 142.9 495 44.6
ClCG01G011770 Citrullus lanatus HOM05D007535 ORTHO05D008520 1.4e-31 141.7 494 52.0
EL10Ac7g16124 Beta vulgaris HOM05D007535 ORTHO05D008520 3.2e-31 140.6 495 44.6
Gorai.004G011300 Gossypium raimondii HOM05D007535 ORTHO05D008520 4.2e-31 140.2 487 49.9
Hund18777 Selenicereus undatus HOM05D007535 ORTHO05D008520 9.3e-31 139.0 502 43.4
Gohir.A08G006800 Gossypium hirsutum HOM05D007535 ORTHO05D008520 1.2e-30 138.7 487 48.9
CSS0035480 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 1.6e-30 138.3 309 37.5
GSVIVG01036079001 Vitis vinifera HOM05D007535 ORTHO05D008520 2.1e-30 137.9 486 53.5
Lj2A969T70 Lonicera japonica HOM05D007535 ORTHO05D008520 4.6e-30 136.7 295 38.0
PSO339G0294 Papaver somniferum HOM05D007535 ORTHO05D008520 4.6e-30 136.7 487 45.8
MSTRG.12377 Avicennia marina HOM05D007535 ORTHO05D008520 5.1e-29 133.3 505 52.9
Gohir.D08G017000 Gossypium hirsutum HOM05D007535 ORTHO05D008520 5.1e-29 133.3 496 48.6
HanXRQChr14g0433121 Helianthus annuus HOM05D007535 ORTHO05D008520 1.1e-28 132.1 479 53.7
Cpa.g.sc195.29 Carica papaya HOM05D007535 ORTHO05D008520 2.5e-28 131.0 283 38.5
Manes.04G001100 Manihot esculenta HOM05D007535 ORTHO05D008520 4.3e-28 130.2 504 49.4
Ca_01647_v3 Cicer arietinum L. HOM05D002184 ORTHO05D002379 1.6e-27 128.3 490 53.3
Hma1.2p1_2164F.1_g315730 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 3.6e-27 127.1 290 37.6
Sed0017293 Sechium edule HOM05D007535 ORTHO05D008520 3.6e-27 127.1 491 51.5
Hma1.2p1_2164F.1_g315740 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 4.8e-27 126.7 289 37.4
ECA238G4833 Erigeron canadensis HOM05D007535 ORTHO05D008520 3.1e-26 124.0 338 55.0
Dinv08923 Davidia involucrata HOM05D007535 ORTHO05D008520 6.9e-26 122.9 499 38.1
Glyma.12G186700 Glycine max HOM05D007535 ORTHO05D008520 9.0e-26 122.5 494 52.8
FvH4_3g25730 Fragaria vesca HOM05D007535 ORTHO05D008520 3.4e-25 120.6 491 52.1
FAN25G3072 Fragaria x ananassa HOM05D007535 ORTHO05D008520 3.4e-25 120.6 490 52.4
Lsat_1_v5_gn_2_34620 Lactuca sativa HOM05D007535 ORTHO05D008520 5.8e-25 119.8 370 58.6
FAN11G3206 Fragaria x ananassa HOM05D007535 ORTHO05D008520 7.6e-25 119.4 497 51.1
Nitab4.5_0001640g0010 Nicotiana tabacum HOM05D007535 ORTHO05D008520 1.3e-24 118.6 250 41.2
Cfa009985 Carpinus fangiana HOM05D007535 ORTHO05D008520 2.2e-24 117.9 490 52.4
FAN21G0330 Fragaria x ananassa HOM05D007535 ORTHO05D008520 2.9e-24 117.5 495 42.8
Lj3g0000707 Lotus japonicus HOM05D007535 ORTHO05D008520 2.9e-24 117.5 491 45.8
VMungo1080G1542 Vigna mungo HOM05D007535 ORTHO05D008520 6.4e-24 116.3 501 49.1
Aqoxy4G02717 Aquilegia oxysepala HOM05D007535 ORTHO05D008520 8.4e-24 115.9 483 36.0
Sc12g0004670 Simmondsia chinensis HOM05D007535 ORTHO05D008520 1.4e-23 115.2 486 41.2
unitig_27.g25117 Utricularia gibba HOM05D007535 ORTHO05D008520 3.2e-23 114.0 496 47.8
Eucgr.J00525 Eucalyptus grandis HOM05D007535 ORTHO05D008520 9.3e-23 112.5 494 49.8
Ciclev10028368m.g Citrus clementina HOM05D007535 ORTHO05D008520 1.6e-22 111.7 497 51.1
MBI17_g01489_MAGBIO Magnolia biondii HOM05D007535 ORTHO05D008520 1.6e-22 111.7 281 34.9
Glyma.13G314800 Glycine max HOM05D007535 ORTHO05D008520 4.6e-22 110.2 498 52.6
AUR62001527 Chenopodium quinoa HOM05D007535 ORTHO05D008520 6.0e-22 109.8 514 42.6
SalBow3G0383 Salvia bowleyana HOM05D007535 ORTHO05D008520 7.9e-22 109.4 488 52.5
Sc12g0004620 Simmondsia chinensis HOM05D007535 ORTHO05D008520 7.9e-22 109.4 485 38.1
arahy.Tifrunner.gnm1.ann1.ETK20Z Arachis hypogaea HOM05D007535 ORTHO05D008520 1.3e-21 108.6 490 52.0
arahy.Tifrunner.gnm1.ann1.TGP3GH Arachis hypogaea HOM05D007535 ORTHO05D008520 1.7e-21 108.2 497 43.1
Atru.chr3.3166 Acer truncatum HOM05D007535 ORTHO05D008520 5.1e-21 106.7 470 52.6
TPR.G4567 Trifolium pratense HOM05D007535 ORTHO05D008520 5.1e-21 106.7 493 49.3
TWI79G0866 Tripterygium wilfordii HOM05D007535 ORTHO05D008520 1.5e-20 105.1 494 50.6
CDE02G4009 Ceratophyllum demersum HOM05D007535 ORTHO05D008520 7.4e-20 102.8 494 45.7
Haze_23344 Corylus avellana HOM05D007535 ORTHO05D008520 1.6e-19 101.7 285 34.4
CsaV3_1G015090 Cucumis sativus L. HOM05D007535 ORTHO05D008520 1.6e-19 101.7 489 49.3
Lalb_Chr24g0393491 Lupinus albus HOM05D007535 ORTHO05D008520 1.6e-19 101.7 350 29.4
PGR119G1786 Punica granatum HOM05D007535 ORTHO05D008520 8.1e-19 99.4 493 51.7
Oeu024409.1 Olea europaea HOM05D007535 ORTHO05D008520 4.0e-18 97.1 63 76.2
Potri.004G199200 Populus trichocarpa HOM05D007535 ORTHO05D008520 5.3e-18 96.7 501 49.1
Os01g0966400 Oryza sativa ssp. japonica HOM05D007535 ORTHO05D008520 2.0e-17 94.7 285 37.2
HPP92_011495 Vanilla planifolia HOM05D007535 ORTHO05D008520 2.0e-17 94.7 484 39.7
Ciclev10029981m.g Citrus clementina HOM05D007535 ORTHO05D008520 7.6e-17 92.8 296 33.4
QL01p011831 Quercus lobata HOM05D007535 ORTHO05D008520 2.9e-16 90.9 559 45.3
Sabra04G0134300 Salix brachista HOM05D001716 ORTHO05D004234 3.8e-16 90.5 492 41.5
MELO3C025588.2 Cucumis melo HOM05D007535 ORTHO05D008520 4.2e-15 87.0 349 29.2
Zm00001eb140080 Zea mays HOM05D007535 ORTHO05D008520 7.1e-15 86.3 497 49.3
Hma1.2p1_2164F.1_g315720 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 7.9e-14 82.8 61 67.2
Actinidia24230 Actinidia chinensis HOM05D007535 ORTHO05D008520 1.0e-13 82.4 243 52.7
Duzib150G0908 Durio zibethinus HOM05D007535 ORTHO05D008520 3.9e-13 80.5 237 34.2
CANSAT54G2250 Cannabis sativa HOM05D007535 ORTHO05D008520 2.5e-12 77.8 489 49.1
CiPaw.14G097800 Carya illinoinensis HOM05D007535 ORTHO05D008520 9.6e-12 75.9 227 34.4
THA.LOC104810927 Tarenaya hassleriana HOM05D007535 ORTHO05D008520 1.6e-11 75.1 484 47.5
AUR62020256 Chenopodium quinoa HOM05D007535 ORTHO05D008520 2.8e-11 74.3 273 51.6
Ciclev10028316m.g Citrus clementina HOM05D007535 ORTHO05D008520 1.4e-10 72.0 500 48.0
AL6G33340 Arabidopsis lyrata HOM05D012474 ORTHO05D008520 1.0e-08 65.9 286 63.3
ATR0081G029 Amborella trichopoda HOM05D007535 ORTHO05D008520 3.8e-08 63.9 68 44.1
Carub.0006s2006 Capsella rubella HOM05D012474 ORTHO05D008520 4.9e-08 63.5 302 59.6
C09p54250 Brassica napus HOM05D012474 ORTHO05D008520 8.4e-08 62.8 82 41.5
C09p54330 Brassica napus HOM05D012474 ORTHO05D008520 8.4e-08 62.8 82 41.5
Actinidia24231 Actinidia chinensis HOM05D007535 ORTHO05D008520 1.4e-07 62.0 173 33.5
BcaC04g19565 Brassica carinata HOM05D012474 ORTHO05D008520 1.9e-07 61.6 82 41.5
BolC9t58300H Brassica oleracea HOM05D012474 ORTHO05D008520 2.5e-07 61.2 82 41.5
FAN16G1906 Fragaria x ananassa HOM05D007535 ORTHO05D008520 5.5e-07 60.1 273 28.2
CSS0011293 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 3.5e-06 57.4 42 66.7
FAN25G1573 Fragaria x ananassa HOM05D007535 ORTHO05D008520 3.5e-06 57.4 334 60.2
Aa31LG1G13230 Aethionema arabicum HOM05D012474 ORTHO05D008520 6.0e-06 56.6 488 46.3
Phvul.005G122000 Phaseolus vulgaris HOM05D007535 ORTHO05D008520 6.0e-06 56.6 499 45.7


User provided reference genes

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