Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G744.10 Capsicum annuum HOM05D003142 ORTHO05D003600 3.3e-33 144.4 71 100.0
Sopen06g022470 Solanum pennellii HOM05D003142 ORTHO05D003600 1.9e-25 118.6 65 87.7
PGSC0003DMG401004894 Solanum tuberosum HOM05D003142 ORTHO05D003600 4.3e-25 117.5 65 86.2
Solyc06g063020.4 Solanum lycopersicum HOM05D003142 ORTHO05D003600 7.3e-25 116.7 65 86.2
Nitab4.5_0003137g0050 Nicotiana tabacum HOM05D003142 ORTHO05D003600 2.1e-24 115.2 65 84.6
CAN.G1743.6 Capsicum annuum HOM05D003142 ORTHO05D003600 2.8e-24 114.8 65 86.2
Nitab4.5_0027818g0010 Nicotiana tabacum HOM05D003142 ORTHO05D003600 3.6e-24 114.4 65 83.1
QL05p003308 Quercus lobata HOM05D003142 ORTHO05D003600 2.6e-22 108.2 65 78.5
Dinv20407 Davidia involucrata HOM05D003142 ORTHO05D003600 3.4e-22 107.8 65 78.5
Thecc.06G125300 Theobroma cacao HOM05D003142 ORTHO05D003600 5.8e-22 107.1 65 76.9
Nn6g35659 Nelumbo nucifera HOM05D003142 ORTHO05D003600 7.5e-22 106.7 62 79.0
FvH4_6g35210 Fragaria vesca HOM05D003142 ORTHO05D003600 1.3e-21 105.9 65 76.9
FAN09G1984 Fragaria x ananassa HOM05D003142 ORTHO05D003600 1.3e-21 105.9 65 76.9
FAN14G2660 Fragaria x ananassa HOM05D003142 ORTHO05D003600 1.3e-21 105.9 65 76.9
Lj3g0012768 Lotus japonicus HOM05D003142 ORTHO05D003600 1.3e-21 105.9 65 76.9
RcHm_v2.0_Chr2g0146551 Rosa chinensis HOM05D003142 ORTHO05D003600 1.3e-21 105.9 65 76.9
TAR624G0191 Trochodendron aralioides HOM05D003142 ORTHO05D003600 1.3e-21 105.9 65 75.4
GSVIVG01016711001 Vitis vinifera HOM05D003142 ORTHO05D003600 1.3e-21 105.9 65 75.4
CSS0002964 Camellia sinensis var. sinensis HOM05D003142 ORTHO05D003600 1.7e-21 105.5 65 76.9
CSS0037213 Camellia sinensis var. sinensis HOM05D003142 ORTHO05D003600 1.7e-21 105.5 65 76.9
Eucgr.F02474 Eucalyptus grandis HOM05D003142 ORTHO05D003600 2.2e-21 105.1 65 73.8
Haze_16069 Corylus avellana HOM05D000945 ORTHO05D003600 2.9e-21 104.8 65 76.9
Duzib235G1234 Durio zibethinus HOM05D003142 ORTHO05D003600 2.9e-21 104.8 65 76.9
Ca_04807_v3 Cicer arietinum L. HOM05D003142 ORTHO05D003600 3.7e-21 104.4 65 73.8
Glyma.16G010500 Glycine max HOM05D003142 ORTHO05D003600 3.7e-21 104.4 65 78.5
Actinidia21804 Actinidia chinensis HOM05D003142 ORTHO05D003600 4.9e-21 104.0 65 75.4
Cfa003505 Carpinus fangiana HOM05D000945 ORTHO05D003600 8.3e-21 103.2 65 76.9
SGA_v2.0_scaffold71G23884 Striga asiatica HOM05D003142 ORTHO05D003600 8.3e-21 103.2 65 73.8
MSTRG.10930 Avicennia marina HOM05D003142 ORTHO05D003600 1.1e-20 102.8 65 73.8
CiPaw.01G215300 Carya illinoinensis HOM05D003142 ORTHO05D003600 1.4e-20 102.4 65 73.8
ATR0681G266 Amborella trichopoda HOM05D003142 ORTHO05D003600 1.9e-20 102.1 63 73.0
MBI13_g01659_MAGBIO Magnolia biondii HOM05D000036 ORTHO05D002265 1.9e-20 102.1 65 69.2
Prupe.3G037000 Prunus persica HOM05D003142 ORTHO05D003600 1.9e-20 102.1 65 73.8
Rhsim08G0241500 Rhododendron simsii HOM05D003142 ORTHO05D003600 1.9e-20 102.1 65 73.8
TWI23G0931 Tripterygium wilfordii HOM05D003142 ORTHO05D003600 1.9e-20 102.1 65 73.8
vmacro15060 Vaccinium macrocarpon HOM05D003142 ORTHO05D003600 1.9e-20 102.1 65 73.8
Aqoxy7G00984 Aquilegia oxysepala HOM05D003142 ORTHO05D003600 2.4e-20 101.7 65 69.2
Migut.I01108 Erythranthe guttata HOM05D003142 ORTHO05D003600 2.4e-20 101.7 65 72.3
Phvul.010G125800 Phaseolus vulgaris HOM05D003142 ORTHO05D003600 2.4e-20 101.7 65 75.4
COL.COLO4_30808 Corchorus olitorius HOM05D003142 ORTHO05D003600 3.2e-20 101.3 65 75.4
DCAR_016105 Daucus carota HOM05D003142 ORTHO05D003600 3.2e-20 101.3 65 73.8
Gohir.A10G056300 Gossypium hirsutum HOM05D003142 ORTHO05D003600 3.2e-20 101.3 65 72.3
HanXRQChr15g0497171 Helianthus annuus HOM05D003142 ORTHO05D003600 3.2e-20 101.3 65 69.2
Psat4g166960 Pisum sativum HOM05D003142 ORTHO05D003600 3.2e-20 101.3 65 72.3
TPR.G16663 Trifolium pratense HOM05D003142 ORTHO05D003600 3.2e-20 101.3 65 72.3
AUR62009925 Chenopodium quinoa HOM05D003142 ORTHO05D003600 4.1e-20 100.9 65 70.8
FAN05G5623 Fragaria x ananassa HOM05D003142 ORTHO05D003600 4.1e-20 100.9 65 73.8
Medtr8g022240 Medicago truncatula HOM05D003142 ORTHO05D003600 4.1e-20 100.9 65 72.3
Gorai.011G062300 Gossypium raimondii HOM05D003142 ORTHO05D003600 5.4e-20 100.5 65 70.8
Atru.chr1.4091 Acer truncatum HOM05D003142 ORTHO05D003600 7.0e-20 100.1 65 73.8
Lalb_Chr03g0041291 Lupinus albus HOM05D003142 ORTHO05D003600 7.0e-20 100.1 65 67.7
MD09G1177700 Malus domestica HOM05D003142 ORTHO05D003600 7.0e-20 100.1 65 72.3
Potri.003G069700 Populus trichocarpa HOM05D003142 ORTHO05D003600 9.2e-20 99.8 65 69.2
arahy.Tifrunner.gnm1.ann1.J5EU5Y Arachis hypogaea HOM05D003142 ORTHO05D003600 1.2e-19 99.4 62 72.6
EL10Ac7g16447 Beta vulgaris HOM05D003142 ORTHO05D003600 1.2e-19 99.4 65 73.8
AUR62001440 Chenopodium quinoa HOM05D003142 ORTHO05D003600 1.2e-19 99.4 65 69.2
Oeu005588.1 Olea europaea HOM05D003142 ORTHO05D003600 1.2e-19 99.4 65 73.8
PSO104G0149 Papaver somniferum HOM05D003142 ORTHO05D003600 1.2e-19 99.4 65 72.3
PSO104G0224 Papaver somniferum HOM05D003142 ORTHO05D003600 1.2e-19 99.4 65 72.3
Sc15g0000640 Simmondsia chinensis HOM05D003142 ORTHO05D003600 1.2e-19 99.4 65 72.3
arahy.Tifrunner.gnm1.ann1.8YD36W Arachis hypogaea HOM05D003142 ORTHO05D003600 1.6e-19 99.0 62 72.6
CANSAT56G4392 Cannabis sativa HOM05D003142 ORTHO05D003600 1.6e-19 99.0 65 64.6
FAN02G2173 Fragaria x ananassa HOM05D000945 ORTHO05D003600 2.7e-19 98.2 65 70.8
Sabra03G0041000 Salix brachista HOM05D003142 ORTHO05D003600 2.7e-19 98.2 65 70.8
PSO421G0455 Papaver somniferum HOM05D003142 ORTHO05D003600 4.6e-19 97.4 65 70.8
Cpa.g.sc25.154 Carica papaya HOM05D003142 ORTHO05D003600 6.0e-19 97.1 82 61.0
Manes.11G016000 Manihot esculenta HOM05D003142 ORTHO05D003600 6.0e-19 97.1 65 69.2
CDE11G0511 Ceratophyllum demersum HOM05D003142 ORTHO05D003600 7.8e-19 96.7 61 70.5
CsaV3_7G034230 Cucumis sativus L. HOM05D003142 ORTHO05D003600 7.8e-19 96.7 62 69.4
CDE05G1488 Ceratophyllum demersum HOM05D003142 ORTHO05D003600 1.0e-18 96.3 61 68.9
Ciclev10025568m.g Citrus clementina HOM05D003142 ORTHO05D003600 1.7e-18 95.5 65 67.7
HPP92_026312 Vanilla planifolia HOM05D003142 ORTHO05D003600 2.3e-18 95.1 62 72.6
Ah.02g128500 Amaranthus hybridus HOM05D003142 ORTHO05D003600 3.0e-18 94.7 65 66.2
MELO3C024332.2 Cucumis melo HOM05D003142 ORTHO05D003600 3.0e-18 94.7 61 68.9
ECA232G3972 Erigeron canadensis HOM05D003142 ORTHO05D003600 3.9e-18 94.4 65 63.1
PSO384G2166 Papaver somniferum HOM05D003142 ORTHO05D003600 5.1e-18 94.0 62 69.4
ClCG09G001160 Citrullus lanatus HOM05D003142 ORTHO05D003600 6.6e-18 93.6 61 68.9
Ciclev10025792m.g Citrus clementina HOM05D003142 ORTHO05D003600 3.3e-17 91.3 65 64.6
PGR049G0005 Punica granatum HOM05D003142 ORTHO05D003600 3.3e-17 91.3 66 65.2
PGR119G0325 Punica granatum HOM05D003142 ORTHO05D003600 3.3e-17 91.3 66 65.2
Ciclev10027460m.g Citrus clementina HOM05D003142 ORTHO05D003600 4.3e-17 90.9 65 64.6
Gohir.D10G058200 Gossypium hirsutum HOM05D003142 ORTHO05D003600 4.3e-17 90.9 65 66.2
Sed0022478 Sechium edule HOM05D003142 ORTHO05D003600 4.3e-17 90.9 61 68.9
Peaxi162Scf00207g01552 Petunia axillaris HOM05D003142 ORTHO05D003600 1.4e-15 85.9 125 44.8
Lsat_1_v5_gn_4_91360 Lactuca sativa HOM05D003142 ORTHO05D003600 1.8e-15 85.5 94 48.9
VMungo0331G1342 Vigna mungo HOM05D003142 ORTHO05D003600 1.5e-14 82.4 53 73.6
Manes.12G101900 Manihot esculenta HOM05D003142 ORTHO05D003600 4.9e-13 77.4 64 57.8
Pp3c24_14400 Physcomitrium patens HOM05D003142 ORTHO05D003600 4.9e-13 77.4 67 53.7
Hma1.2p1_1415F.1_g281980 Hydrangea macrophylla HOM05D003142 ORTHO05D003600 6.4e-13 77.0 64 56.2
HPP92_004082 Vanilla planifolia HOM05D003142 ORTHO05D003600 1.9e-12 75.5 64 56.2
CANSAT01G0954 Cannabis sativa HOM05D003142 ORTHO05D003600 2.4e-12 75.1 64 54.7
HPP92_004108 Vanilla planifolia HOM05D003142 ORTHO05D003600 2.4e-12 75.1 64 56.2
Prupe.7G136600 Prunus persica HOM05D003142 ORTHO05D003600 4.1e-12 74.3 64 54.7
Cfa003994 Carpinus fangiana HOM05D000591 ORTHO05D000579 7.1e-12 73.6 63 57.1
Haze_15430 Corylus avellana HOM05D003142 ORTHO05D003600 7.1e-12 73.6 59 59.3
MD02G1168400 Malus domestica HOM05D003142 ORTHO05D003600 7.1e-12 73.6 64 54.7
Potri.005G136000 Populus trichocarpa HOM05D003142 ORTHO05D003600 9.2e-12 73.2 64 54.7
Sopen02g035190 Solanum pennellii HOM05D003142 ORTHO05D003600 2.1e-11 72.0 59 55.9
FvH4_1g15670 Fragaria vesca HOM05D003142 ORTHO05D003600 2.7e-11 71.6 64 53.1
FAN23G2712 Fragaria x ananassa HOM05D003142 ORTHO05D003600 3.5e-11 71.2 64 53.1
FAN28G1520 Fragaria x ananassa HOM05D000591 ORTHO05D000579 3.5e-11 71.2 64 53.1
PGSC0003DMG400010058 Solanum tuberosum HOM05D003142 ORTHO05D003600 3.5e-11 71.2 64 51.6
GSVIVG01006577001 Vitis vinifera HOM05D003142 ORTHO05D003600 3.5e-11 71.2 64 53.1
ATR1133G040 Amborella trichopoda HOM05D003142 ORTHO05D003600 4.6e-11 70.9 54 57.4
Sed0019220 Sechium edule HOM05D003142 ORTHO05D003600 4.6e-11 70.9 59 54.2
TAR381G1689 Trochodendron aralioides HOM05D003142 ORTHO05D003600 4.6e-11 70.9 55 60.0
ClCG02G013230 Citrullus lanatus HOM05D003142 ORTHO05D003600 6.0e-11 70.5 59 54.2
Dinv39877 Davidia involucrata HOM05D003142 ORTHO05D003600 6.0e-11 70.5 64 53.1
Solyc02g090530.4 Solanum lycopersicum HOM05D003142 ORTHO05D003600 7.8e-11 70.1 54 57.4
PSO675G6917 Papaver somniferum HOM05D003142 ORTHO05D003600 1.0e-10 69.7 60 58.3
QL06p042372 Quercus lobata HOM05D003142 ORTHO05D003600 1.0e-10 69.7 64 53.1
THA.LOC104827019 Tarenaya hassleriana HOM05D003142 ORTHO05D003600 1.0e-10 69.7 64 50.0
Ah.02g124010 Amaranthus hybridus HOM05D003142 ORTHO05D003600 1.3e-10 69.3 64 48.4
RcHm_v2.0_Chr2g0104981 Rosa chinensis HOM05D003142 ORTHO05D003600 1.3e-10 69.3 64 51.6
Thecc.01G052100 Theobroma cacao HOM05D003142 ORTHO05D003600 1.7e-10 68.9 64 53.1
Atru.chr3.400 Acer truncatum HOM05D003142 ORTHO05D003600 2.3e-10 68.6 64 51.6
CsaV3_2G017280 Cucumis sativus L. HOM05D003142 ORTHO05D003600 3.0e-10 68.2 59 52.5
Phvul.002G020700 Phaseolus vulgaris HOM05D003142 ORTHO05D003600 3.0e-10 68.2 64 50.0
Aqoxy6G01414 Aquilegia oxysepala HOM05D003142 ORTHO05D003600 3.9e-10 67.8 60 53.3
DCAR_010908 Daucus carota HOM05D003142 ORTHO05D003600 3.9e-10 67.8 64 51.6
Aa31LG1G15400 Aethionema arabicum HOM05D003142 ORTHO05D003600 5.1e-10 67.4 64 50.0
CAN.G836.63 Capsicum annuum HOM05D003142 ORTHO05D003600 5.1e-10 67.4 64 48.4
Ciclev10025604m.g Citrus clementina HOM05D003142 ORTHO05D003600 5.1e-10 67.4 65 55.4
Glyma.01G184400 Glycine max HOM05D003142 ORTHO05D003600 5.1e-10 67.4 64 48.4
Sabra05G0108800 Salix brachista HOM05D003142 ORTHO05D003600 5.1e-10 67.4 51 62.7
ECA232G3349 Erigeron canadensis HOM05D003142 ORTHO05D003600 6.6e-10 67.0 59 47.5
Glyma.11G057900 Glycine max HOM05D003142 ORTHO05D003600 8.6e-10 66.6 64 48.4
PSO541G2734 Papaver somniferum HOM05D003142 ORTHO05D003600 8.6e-10 66.6 60 56.7
CSS0029766 Camellia sinensis var. sinensis HOM05D003142 ORTHO05D003600 1.1e-09 66.2 64 51.6
Gohir.D12G088700 Gossypium hirsutum HOM05D003142 ORTHO05D003600 1.1e-09 66.2 64 51.6
Gorai.008G074400 Gossypium raimondii HOM05D003142 ORTHO05D003600 1.1e-09 66.2 64 51.6
vmacro05325 Vaccinium macrocarpon HOM05D003142 ORTHO05D003600 1.1e-09 66.2 64 48.4
AL8G44560 Arabidopsis lyrata HOM05D003142 ORTHO05D003600 1.5e-09 65.9 64 46.9
AT5G66840 Arabidopsis thaliana HOM05D003142 ORTHO05D003600 1.5e-09 65.9 64 46.9
BcaB04g20095 Brassica carinata HOM05D003142 ORTHO05D003600 1.5e-09 65.9 63 50.8
Carub.0008s2765 Capsella rubella HOM05D003142 ORTHO05D003600 1.5e-09 65.9 54 55.6
AUR62001955 Chenopodium quinoa HOM05D003142 ORTHO05D003600 1.5e-09 65.9 51 56.9
VMungo1215G1060 Vigna mungo HOM05D003142 ORTHO05D003600 1.5e-09 65.9 59 50.8
BcaC04g23165 Brassica carinata HOM05D003142 ORTHO05D003600 1.9e-09 65.5 63 49.2
C09p11500 Brassica napus HOM05D003142 ORTHO05D003600 1.9e-09 65.5 63 49.2
BolC9t54039H Brassica oleracea HOM05D003142 ORTHO05D003600 1.9e-09 65.5 63 49.2
Ca_24785_v3 Cicer arietinum L. HOM05D003142 ORTHO05D003600 1.9e-09 65.5 64 50.0
Cc04_g01010 Coffea canephora HOM05D003142 ORTHO05D003600 1.9e-09 65.5 65 50.8
Duzib147G1352 Durio zibethinus HOM05D003142 ORTHO05D003600 1.9e-09 65.5 64 51.6
Migut.H00456 Erythranthe guttata HOM05D003142 ORTHO05D003600 1.9e-09 65.5 52 57.7
BraA09t36620Z Brassica rapa HOM05D003142 ORTHO05D003600 3.3e-09 64.7 63 47.6
AUR62003852 Chenopodium quinoa HOM05D003142 ORTHO05D003600 4.3e-09 64.3 53 56.6
Thhalv10004096m.g Eutrema salsugineum HOM05D003142 ORTHO05D003600 4.3e-09 64.3 54 51.9
HanXRQChr14g0430641 Helianthus annuus HOM05D003142 ORTHO05D003600 4.3e-09 64.3 48 60.4
HanXRQChr14g0430661 Helianthus annuus HOM05D003142 ORTHO05D003600 4.3e-09 64.3 51 52.9
Peaxi162Scf00916g00223 Petunia axillaris HOM05D003142 ORTHO05D003600 4.3e-09 64.3 64 46.9
Medtr5g017820 Medicago truncatula HOM05D003142 ORTHO05D003600 5.6e-09 63.9 59 52.5
Gohir.A12G070100 Gossypium hirsutum HOM05D003142 ORTHO05D003600 7.3e-09 63.5 57 54.4
COL.COLO4_11378 Corchorus olitorius HOM05D000591 ORTHO05D000579 9.5e-09 63.2 64 48.4
Sp2g29820 Schrenkiella parvula HOM05D003142 ORTHO05D003600 1.2e-08 62.8 54 53.7
Mapoly0087s0059 Marchantia polymorpha HOM05D003142 ORTHO05D003600 2.1e-08 62.0 56 42.9
Oeu021839.1 Olea europaea HOM05D003142 ORTHO05D003600 2.1e-08 62.0 64 48.4
ClCG05G001240 Citrullus lanatus HOM05D003142 ORTHO05D003600 2.8e-08 61.6 55 49.1
Os10g0391300 Oryza sativa ssp. japonica HOM05D003142 ORTHO05D003600 2.8e-08 61.6 52 53.8
arahy.Tifrunner.gnm1.ann1.4YD75G Arachis hypogaea HOM05D003142 ORTHO05D003600 3.6e-08 61.2 71 40.8
arahy.Tifrunner.gnm1.ann1.U4D6S9 Arachis hypogaea HOM05D003142 ORTHO05D003600 3.6e-08 61.2 71 40.8
Lj2g0011618 Lotus japonicus HOM05D003142 ORTHO05D003600 3.6e-08 61.2 59 49.2
Oeu012001.1 Olea europaea HOM05D003142 ORTHO05D003600 8.1e-08 60.1 64 45.3
TPR.G31100 Trifolium pratense HOM05D003142 ORTHO05D003600 8.1e-08 60.1 59 49.2
CARHR280830 Cardamine hirsuta HOM05D003142 ORTHO05D003600 1.1e-07 59.7 51 54.9
Lsat_1_v5_gn_4_167040 Lactuca sativa HOM05D003142 ORTHO05D003600 1.1e-07 59.7 50 54.0
Lalb_Chr09g0323011 Lupinus albus HOM05D003142 ORTHO05D003600 1.1e-07 59.7 64 42.2
Nitab4.5_0000310g0210 Nicotiana tabacum HOM05D003142 ORTHO05D003600 1.4e-07 59.3 54 48.1
Nitab4.5_0000440g0180 Nicotiana tabacum HOM05D003142 ORTHO05D003600 1.4e-07 59.3 54 48.1
Actinidia12061 Actinidia chinensis HOM05D003142 ORTHO05D003600 4.0e-07 57.8 64 40.6
TWI73G1278 Tripterygium wilfordii HOM05D003142 ORTHO05D003600 4.0e-07 57.8 46 58.7
AagrBONN_evm.TU.Sc2ySwM_362.1306 Anthoceros agrestis HOM05D003142 ORTHO05D003600 6.8e-07 57.0 67 40.3
SGA_v2.0_scaffold15G07260 Striga asiatica HOM05D003142 ORTHO05D003600 6.8e-07 57.0 66 43.9
Zm00001eb109490 Zea mays HOM05D003142 ORTHO05D003600 2.0e-06 55.5 52 50.0
Rhsim10G0119900 Rhododendron simsii HOM05D003142 ORTHO05D003600 3.4e-06 54.7 49 49.0
AagrBONN_evm.TU.Sc2ySwM_362.1302 Anthoceros agrestis HOM05D003142 ORTHO05D003600 9.9e-06 53.1 67 37.3


User provided reference genes

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