Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G744.1 Capsicum annuum HOM05D000648 ORTHO05D000568 8.2e-61 236.9 121 100.0
CAN.G65.225 Capsicum annuum HOM05D000107 ORTHO05D000568 7.0e-44 180.6 112 79.5
CAN.G1233.5 Capsicum annuum HOM05D000648 ORTHO05D000568 6.5e-42 174.1 120 74.2
CAN.G89.13 Capsicum annuum HOM05D000648 ORTHO05D000568 6.1e-40 167.5 107 77.6
Sopen03g026680 Solanum pennellii HOM05D010994 ORTHO05D030662 5.7e-38 161.0 119 70.6
CAN.G199.7 Capsicum annuum HOM05D000648 ORTHO05D000568 4.7e-32 141.4 89 79.8
Sopen01g013790 Solanum pennellii HOM05D010994 ORTHO05D000568 4.7e-32 141.4 120 60.8
CAN.G1230.6 Capsicum annuum HOM05D000107 ORTHO05D000568 2.9e-21 105.5 120 51.7
CAN.G861.5 Capsicum annuum HOM05D000648 ORTHO05D000568 2.0e-19 99.4 105 54.3
CAN.G815.1 Capsicum annuum HOM05D000648 ORTHO05D000568 4.0e-15 85.1 96 49.0
Solyc07g026915.1 Solanum lycopersicum HOM05D000648 ORTHO05D000568 6.8e-15 84.3 69 63.8
SHI37606 Sapria himalayana HOM05D000648 ORTHO05D000568 9.8e-14 80.5 87 39.1
SHI04929 Sapria himalayana HOM05D000648 ORTHO05D000568 1.3e-13 80.1 88 38.6
SHI33441 Sapria himalayana HOM05D000107 ORTHO05D000568 1.7e-13 79.7 116 36.2
SHI34959 Sapria himalayana HOM05D000648 ORTHO05D000568 4.9e-13 78.2 88 40.9
Aa31sc113G30 Aethionema arabicum HOM05D000107 ORTHO05D000062 6.4e-13 77.8 97 41.2
SHI39737 Sapria himalayana HOM05D000648 ORTHO05D000568 6.4e-13 77.8 87 39.1
SHI38343 Sapria himalayana HOM05D000648 ORTHO05D000568 1.1e-12 77.0 120 32.5
TWI75G1855 Tripterygium wilfordii HOM05D000107 ORTHO05D000568 1.1e-12 77.0 100 38.0
SHI47468 Sapria himalayana HOM05D000107 ORTHO05D000062 3.2e-12 75.5 98 36.7
SHI42647 Sapria himalayana HOM05D000648 ORTHO05D000568 4.1e-12 75.1 88 39.8
SHI49792 Sapria himalayana HOM05D000107 ORTHO05D000062 5.4e-12 74.7 100 39.0
SHI52728 Sapria himalayana HOM05D000107 ORTHO05D000062 5.4e-12 74.7 100 39.0
SHI53250 Sapria himalayana HOM05D000107 ORTHO05D000062 5.4e-12 74.7 100 39.0
SHI24993 Sapria himalayana HOM05D000648 ORTHO05D000568 9.2e-12 73.9 88 35.2
SHI23324 Sapria himalayana HOM05D000107 ORTHO05D000568 1.2e-11 73.6 88 39.8
Ca_30309_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000568 2.7e-11 72.4 90 40.0
SHI38025 Sapria himalayana HOM05D000648 ORTHO05D000568 2.7e-11 72.4 105 38.1
SHI03547 Sapria himalayana HOM05D000648 ORTHO05D000568 3.5e-11 72.0 88 35.2
SHI53957 Sapria himalayana HOM05D000648 ORTHO05D000568 3.5e-11 72.0 88 35.2
SHI54310 Sapria himalayana HOM05D000648 ORTHO05D000568 4.6e-11 71.6 88 38.6
SHI12387 Sapria himalayana HOM05D000648 ORTHO05D000568 6.0e-11 71.2 86 43.0
SHI43610 Sapria himalayana HOM05D000648 ORTHO05D000568 6.0e-11 71.2 87 37.9
SHI09706 Sapria himalayana HOM05D000648 ORTHO05D000062 7.8e-11 70.9 87 35.6
SHI14372 Sapria himalayana HOM05D000648 ORTHO05D000568 7.8e-11 70.9 87 34.5
SHI04265 Sapria himalayana HOM05D000648 ORTHO05D000568 1.7e-10 69.7 88 33.0
SHI06296 Sapria himalayana HOM05D000648 ORTHO05D000568 1.7e-10 69.7 88 35.2
SHI49978 Sapria himalayana HOM05D000648 ORTHO05D000568 2.3e-10 69.3 88 36.4
SHI52802 Sapria himalayana HOM05D000648 ORTHO05D000568 3.0e-10 68.9 83 34.9
SHI49432 Sapria himalayana HOM05D000648 ORTHO05D000568 3.9e-10 68.6 86 34.9
SHI25737 Sapria himalayana HOM05D000648 ORTHO05D000568 5.1e-10 68.2 86 32.6
SHI17167 Sapria himalayana HOM05D000648 ORTHO05D000568 6.6e-10 67.8 82 37.8
SHI29872 Sapria himalayana HOM05D000648 ORTHO05D000568 6.6e-10 67.8 81 37.0
SHI06171 Sapria himalayana HOM05D000648 ORTHO05D000568 8.6e-10 67.4 86 32.6
SHI25691 Sapria himalayana HOM05D000648 ORTHO05D000568 8.6e-10 67.4 127 29.9
SHI34962 Sapria himalayana HOM05D000648 ORTHO05D000568 8.6e-10 67.4 88 34.1
SHI51550 Sapria himalayana HOM05D000648 ORTHO05D000568 8.6e-10 67.4 84 35.7
Aa31sc106G50 Aethionema arabicum HOM05D000107 ORTHO05D000062 1.1e-09 67.0 91 37.4
Ah.10g029050 Amaranthus hybridus HOM05D000107 ORTHO05D000568 1.1e-09 67.0 86 34.9
SHI50298 Sapria himalayana HOM05D000648 ORTHO05D000568 1.1e-09 67.0 88 34.1
SHI53977 Sapria himalayana HOM05D000648 ORTHO05D000568 1.1e-09 67.0 86 36.0
SHI39685 Sapria himalayana HOM05D000648 ORTHO05D000568 1.9e-09 66.2 74 37.8
SHI49672 Sapria himalayana HOM05D000648 ORTHO05D000568 2.5e-09 65.9 119 32.8
SHI54232 Sapria himalayana HOM05D000648 ORTHO05D000568 2.5e-09 65.9 82 36.6
CANSAT11G2258 Cannabis sativa HOM05D000107 ORTHO05D000062 4.3e-09 65.1 88 35.2
Ca_05036_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000568 4.3e-09 65.1 88 40.9
SHI49339 Sapria himalayana HOM05D000648 ORTHO05D000568 4.3e-09 65.1 84 35.7
SHI36113 Sapria himalayana HOM05D000107 ORTHO05D000568 5.6e-09 64.7 115 33.9
SHI25129 Sapria himalayana HOM05D007949 ORTHO05D000568 7.3e-09 64.3 86 38.4
SHI52783 Sapria himalayana HOM05D000648 ORTHO05D000568 7.3e-09 64.3 79 35.4
TWI59G1300 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 7.3e-09 64.3 101 31.7
SHI19876 Sapria himalayana HOM05D000648 ORTHO05D000568 9.5e-09 63.9 113 29.2
SHI51476 Sapria himalayana HOM05D000648 ORTHO05D000568 9.5e-09 63.9 131 29.0
SHI54013 Sapria himalayana HOM05D000648 ORTHO05D000568 9.5e-09 63.9 82 35.4
CANSAT64G1673 Cannabis sativa HOM05D000107 ORTHO05D000062 1.2e-08 63.5 88 33.0
CANSAT64G2733 Cannabis sativa HOM05D000107 ORTHO05D000062 1.2e-08 63.5 88 33.0
SHI27288 Sapria himalayana HOM05D000648 ORTHO05D000568 1.2e-08 63.5 131 28.2
SHI29289 Sapria himalayana HOM05D000648 ORTHO05D000568 1.2e-08 63.5 88 34.1
SHI35693 Sapria himalayana HOM05D000648 ORTHO05D000568 1.2e-08 63.5 88 33.0
SHI42434 Sapria himalayana HOM05D000648 ORTHO05D000568 1.6e-08 63.2 75 33.3
SHI09708 Sapria himalayana HOM05D000107 ORTHO05D000062 2.1e-08 62.8 111 34.2
SHI19722 Sapria himalayana HOM05D000648 ORTHO05D000568 2.1e-08 62.8 88 30.7
SHI19941 Sapria himalayana HOM05D000648 ORTHO05D000568 2.1e-08 62.8 80 32.5
SHI40968 Sapria himalayana HOM05D000648 ORTHO05D000568 2.1e-08 62.8 93 33.3
SHI29942 Sapria himalayana HOM05D000648 ORTHO05D000568 2.8e-08 62.4 80 36.2
TPR.G25459 Trifolium pratense HOM05D024219 ORTHO05D000568 2.8e-08 62.4 94 39.4
SHI31270 Sapria himalayana HOM05D000648 ORTHO05D000568 3.6e-08 62.0 129 30.2
SHI52128 Sapria himalayana HOM05D000648 ORTHO05D000568 3.6e-08 62.0 76 35.5
SHI30826 Sapria himalayana HOM05D000648 ORTHO05D000568 4.7e-08 61.6 81 33.3
SHI37277 Sapria himalayana HOM05D000648 ORTHO05D000568 4.7e-08 61.6 87 29.9
SHI45187 Sapria himalayana HOM05D000648 ORTHO05D000568 4.7e-08 61.6 84 33.3
SHI48109 Sapria himalayana HOM05D000648 ORTHO05D000568 4.7e-08 61.6 88 31.8
TWI32G1089 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 4.7e-08 61.6 84 38.1
CANSAT78G1492 Cannabis sativa HOM05D000107 ORTHO05D000062 6.2e-08 61.2 85 34.1
CANSAT78G2036 Cannabis sativa HOM05D000107 ORTHO05D000062 6.2e-08 61.2 85 34.1
THA.LOC104821593 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 6.2e-08 61.2 92 35.9
CANSAT54G0700 Cannabis sativa HOM05D000107 ORTHO05D000062 8.1e-08 60.8 75 33.3
CANSAT80G0350 Cannabis sativa HOM05D000107 ORTHO05D000062 8.1e-08 60.8 75 33.3
TPR.G36035 Trifolium pratense HOM05D000107 ORTHO05D000062 8.1e-08 60.8 100 33.0
TWI36G0445 Tripterygium wilfordii HOM05D000107 ORTHO05D000568 8.1e-08 60.8 89 36.0
Aa31LG6G10220 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.1e-07 60.5 91 35.2
SHI38541 Sapria himalayana HOM05D000107 ORTHO05D000062 1.4e-07 60.1 91 36.3
SHI44315 Sapria himalayana HOM05D000648 ORTHO05D000568 1.4e-07 60.1 81 32.1
ECA236G4269 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.8e-07 59.7 114 34.2
THA.LOC109116879 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 1.8e-07 59.7 92 34.8
TWI53G0600 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.8e-07 59.7 89 36.0
CANSAT25G1518 Cannabis sativa HOM05D000107 ORTHO05D000062 2.3e-07 59.3 94 33.0
TWI18G0967 Tripterygium wilfordii HOM05D000107 ORTHO05D000568 2.3e-07 59.3 84 36.9
TAR055G0004 Trochodendron aralioides HOM05D000107 ORTHO05D000062 2.3e-07 59.3 88 35.2
TAR709G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000568 2.3e-07 59.3 77 40.3
SHI37484 Sapria himalayana HOM05D000648 ORTHO05D000568 3.1e-07 58.9 81 30.9
SHI40506 Sapria himalayana HOM05D000648 ORTHO05D000568 3.1e-07 58.9 105 33.3
TWI63G0761 Tripterygium wilfordii HOM05D000107 ORTHO05D000568 3.1e-07 58.9 86 34.9
TAR049G0006 Trochodendron aralioides HOM05D000107 ORTHO05D000062 3.1e-07 58.9 78 39.7
SHI15175 Sapria himalayana HOM05D000648 ORTHO05D000568 4.0e-07 58.5 89 31.5
SHI45267 Sapria himalayana HOM05D000648 ORTHO05D000568 4.0e-07 58.5 86 32.6
QL05p061366 Quercus lobata HOM05D000107 ORTHO05D000062 5.2e-07 58.2 87 37.9
TWI73G0119 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 5.2e-07 58.2 97 34.0
SHI47932 Sapria himalayana HOM05D000648 ORTHO05D000568 6.8e-07 57.8 79 30.4
SHI19328 Sapria himalayana HOM05D000648 ORTHO05D000568 8.9e-07 57.4 74 31.1
SHI39664 Sapria himalayana HOM05D000648 ORTHO05D000568 8.9e-07 57.4 88 33.0
SHI46707 Sapria himalayana HOM05D000648 ORTHO05D000568 8.9e-07 57.4 105 32.4
TPR.G34585 Trifolium pratense HOM05D000107 ORTHO05D000062 8.9e-07 57.4 123 28.5
TWI73G0477 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 8.9e-07 57.4 84 36.9
Atru.chr10.32 Acer truncatum HOM05D000107 ORTHO05D000062 1.2e-06 57.0 89 36.0
Atru.chr11.622 Acer truncatum HOM05D000107 ORTHO05D000062 1.2e-06 57.0 89 34.8
Atru.chr3.2737 Acer truncatum HOM05D000107 ORTHO05D000062 1.2e-06 57.0 89 36.0
SHI37797 Sapria himalayana HOM05D000648 ORTHO05D000568 1.2e-06 57.0 87 32.2
TWI81G0480 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.2e-06 57.0 84 36.9
TAR190G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.2e-06 57.0 100 31.0
Atru.chr2.2656 Acer truncatum HOM05D000107 ORTHO05D000062 1.5e-06 56.6 89 36.0
EL10Ac4g08646 Beta vulgaris HOM05D000107 ORTHO05D000062 1.5e-06 56.6 90 33.3
PSO384G2882 Papaver somniferum HOM05D000107 ORTHO05D000062 1.5e-06 56.6 76 38.2
SHI31630 Sapria himalayana HOM05D000648 ORTHO05D000568 1.5e-06 56.6 80 32.5
TAR344G0003 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.5e-06 56.6 99 29.3
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 2.0e-06 56.2 84 34.5
ECA233G5623 Erigeron canadensis HOM05D000107 ORTHO05D000568 2.0e-06 56.2 114 32.5
HanXRQChr05g0154061 Helianthus annuus HOM05D000107 ORTHO05D000568 2.0e-06 56.2 85 37.6
HanXRQChr05g0154091 Helianthus annuus HOM05D000107 ORTHO05D000568 2.0e-06 56.2 85 37.6
SHI00549 Sapria himalayana HOM05D007949 ORTHO05D000062 2.0e-06 56.2 119 29.4
TWI59G0583 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 2.0e-06 56.2 86 34.9
ECA234G0534 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.6e-06 55.8 96 38.5
Atru.chr11.112 Acer truncatum HOM05D000107 ORTHO05D000062 3.4e-06 55.5 117 29.1
PSO063G0443 Papaver somniferum HOM05D000107 ORTHO05D000062 3.4e-06 55.5 76 36.8
PSO675G0059 Papaver somniferum HOM05D000107 ORTHO05D000062 3.4e-06 55.5 76 35.5
SHI42757 Sapria himalayana HOM05D000648 ORTHO05D000568 3.4e-06 55.5 84 32.1
PSO675G0591 Papaver somniferum HOM05D000107 ORTHO05D000062 4.4e-06 55.1 76 35.5
SHI31013 Sapria himalayana HOM05D000648 ORTHO05D000568 4.4e-06 55.1 86 30.2
SHI33462 Sapria himalayana HOM05D000648 ORTHO05D000568 4.4e-06 55.1 58 39.7
SHI45005 Sapria himalayana HOM05D000648 ORTHO05D000568 4.4e-06 55.1 79 30.4
SHI47510 Sapria himalayana HOM05D000648 ORTHO05D000568 4.4e-06 55.1 83 30.1
Sopen05g013120 Solanum pennellii HOM05D000107 ORTHO05D000568 4.4e-06 55.1 72 44.4
Atru.chr11.301 Acer truncatum HOM05D000107 ORTHO05D000062 5.8e-06 54.7 85 32.9
HanXRQChr03g0063921 Helianthus annuus HOM05D000107 ORTHO05D000062 5.8e-06 54.7 85 36.5
HanXRQChr03g0064591 Helianthus annuus HOM05D000107 ORTHO05D000062 5.8e-06 54.7 85 36.5
PSO017G1197 Papaver somniferum HOM05D000107 ORTHO05D000062 7.6e-06 54.3 78 37.2
PSO017G6866 Papaver somniferum HOM05D000107 ORTHO05D000062 7.6e-06 54.3 78 37.2
PSO210G7460 Papaver somniferum HOM05D000107 ORTHO05D000062 7.6e-06 54.3 78 37.2
PSO832G2363 Papaver somniferum HOM05D000107 ORTHO05D000062 7.6e-06 54.3 78 37.2
Hund19782 Selenicereus undatus HOM05D000420 ORTHO05D000110 7.6e-06 54.3 86 36.0
PGSC0003DMG401013972 Solanum tuberosum HOM05D000107 ORTHO05D000062 7.6e-06 54.3 101 30.7
Atru.chr2.705 Acer truncatum HOM05D000107 ORTHO05D000062 9.9e-06 53.9 75 36.0
CAN.G175.7 Capsicum annuum HOM05D000107 ORTHO05D000568 9.9e-06 53.9 100 31.0
PSO017G4380 Papaver somniferum HOM05D000107 ORTHO05D000062 9.9e-06 53.9 76 35.5
SHI43006 Sapria himalayana HOM05D000648 ORTHO05D000568 9.9e-06 53.9 58 36.2
SHI47581 Sapria himalayana HOM05D000648 ORTHO05D000568 9.9e-06 53.9 112 28.6
SHI53247 Sapria himalayana HOM05D000648 ORTHO05D000568 9.9e-06 53.9 81 32.1
Hund16119 Selenicereus undatus HOM05D000420 ORTHO05D000110 9.9e-06 53.9 74 37.8
Sopen08g011050 Solanum pennellii HOM05D000107 ORTHO05D000062 9.9e-06 53.9 84 38.1


User provided reference genes

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