Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G742.10 Capsicum annuum HOM05D000135 ORTHO05D000816 2.7e-67 258.5 122 100.0
CAN.G742.23 Capsicum annuum HOM05D000135 ORTHO05D000816 1.7e-18 96.3 51 92.2
CAN.G742.9 Capsicum annuum HOM05D000135 ORTHO05D000816 1.9e-17 92.8 51 88.2
CAN.G742.5 Capsicum annuum HOM05D000135 ORTHO05D000816 3.3e-17 92.0 50 88.0
CAN.G742.19 Capsicum annuum HOM05D000135 ORTHO05D000816 4.3e-17 91.7 51 88.2
Nitab4.5_0002498g0070 Nicotiana tabacum HOM05D000135 ORTHO05D000816 4.3e-17 91.7 48 93.8
Nitab4.5_0007815g0080 Nicotiana tabacum HOM05D000135 ORTHO05D000816 4.3e-17 91.7 48 93.8
Sopen11g029410 Solanum pennellii HOM05D000135 ORTHO05D000816 7.3e-17 90.9 48 91.7
PGSC0003DMG400001977 Solanum tuberosum HOM05D000135 ORTHO05D000816 9.6e-17 90.5 48 91.7
PGSC0003DMG400002993 Solanum tuberosum HOM05D000135 ORTHO05D000816 9.6e-17 90.5 48 91.7
PGSC0003DMG400002994 Solanum tuberosum HOM05D000135 ORTHO05D000816 9.6e-17 90.5 48 91.7
Peaxi162Scf00259g00018 Petunia axillaris HOM05D000135 ORTHO05D000816 1.3e-16 90.1 48 91.7
Peaxi162Scf00259g00126 Petunia axillaris HOM05D000135 ORTHO05D000816 1.3e-16 90.1 48 91.7
Nitab4.5_0002498g0080 Nicotiana tabacum HOM05D000135 ORTHO05D000816 2.1e-16 89.4 48 91.7
PGSC0003DMG400040538 Solanum tuberosum HOM05D000135 ORTHO05D000816 2.1e-16 89.4 48 89.6
PGSC0003DMG400045603 Solanum tuberosum HOM05D000135 ORTHO05D000816 3.6e-16 88.6 48 89.6
Solyc11g071740.2 Solanum lycopersicum HOM05D000135 ORTHO05D000816 4.8e-16 88.2 48 87.5
Solyc11g071760.3 Solanum lycopersicum HOM05D000135 ORTHO05D000816 8.1e-16 87.4 48 87.5
Sopen11g029420 Solanum pennellii HOM05D000135 ORTHO05D000816 8.1e-16 87.4 48 87.5
Sopen11g029430 Solanum pennellii HOM05D000135 ORTHO05D000816 8.1e-16 87.4 48 87.5
Solyc11g071750.2 Solanum lycopersicum HOM05D000135 ORTHO05D000816 5.3e-15 84.7 48 85.4
CAN.G742.16 Capsicum annuum HOM05D000135 ORTHO05D000816 4.5e-14 81.6 49 79.6
Nitab4.5_0000875g0030 Nicotiana tabacum HOM05D000135 ORTHO05D000816 2.2e-13 79.3 50 80.0
Nitab4.5_0002183g0010 Nicotiana tabacum HOM05D000135 ORTHO05D000816 1.9e-12 76.3 50 78.0
CAN.G1463.22 Capsicum annuum HOM05D000135 ORTHO05D000816 2.1e-11 72.8 48 75.0
Manes.05G113200 Manihot esculenta HOM05D000135 ORTHO05D000816 1.4e-07 60.1 48 60.4
FvH4_5g26790 Fragaria vesca HOM05D000135 ORTHO05D000816 5.3e-07 58.2 50 58.0
FAN18G1887 Fragaria x ananassa HOM05D000135 ORTHO05D000816 5.3e-07 58.2 50 58.0
Rhsim10G0007700 Rhododendron simsii HOM05D000135 ORTHO05D000816 5.3e-07 58.2 51 60.8
Rhsim10G0007800 Rhododendron simsii HOM05D000135 ORTHO05D000816 5.3e-07 58.2 51 60.8
Rhsim10G0007900 Rhododendron simsii HOM05D000135 ORTHO05D000816 5.3e-07 58.2 51 60.8
Rhsim10G0008000 Rhododendron simsii HOM05D000135 ORTHO05D000816 5.3e-07 58.2 51 60.8
FAN08G1719 Fragaria x ananassa HOM05D000135 ORTHO05D000816 6.9e-07 57.8 50 58.0
vmacro05943 Vaccinium macrocarpon HOM05D000135 ORTHO05D000816 9.0e-07 57.4 51 58.8
Lj2C97T3 Lonicera japonica HOM05D000135 ORTHO05D000816 1.5e-06 56.6 47 63.8
GSVIVG01013467001 Vitis vinifera HOM05D000135 ORTHO05D000816 1.5e-06 56.6 48 56.2
Medtr6g023460 Medicago truncatula HOM05D000135 ORTHO05D000816 2.6e-06 55.8 48 60.4
Potri.005G259900 Populus trichocarpa HOM05D000135 ORTHO05D000816 2.6e-06 55.8 48 58.3
Sabra05G0201600 Salix brachista HOM05D000135 ORTHO05D000816 2.6e-06 55.8 48 58.3
CSS0033756 Camellia sinensis var. sinensis HOM05D000135 ORTHO05D000816 3.4e-06 55.5 49 61.2
vmacro05944 Vaccinium macrocarpon HOM05D000135 ORTHO05D000816 3.4e-06 55.5 65 49.2
Rhsim08G0044100 Rhododendron simsii HOM05D000135 ORTHO05D000816 5.8e-06 54.7 49 59.2
BraA07t31760Z Brassica rapa HOM05D000135 ORTHO05D000816 7.6e-06 54.3 48 50.0
Potri.002G001400 Populus trichocarpa HOM05D000135 ORTHO05D000816 7.6e-06 54.3 48 54.2
RcHm_v2.0_Chr7g0217701 Rosa chinensis HOM05D000135 ORTHO05D000816 7.6e-06 54.3 50 56.0
BcaC08g47225 Brassica carinata HOM05D000135 ORTHO05D000816 1.0e-05 53.9 48 50.0
C06p50890 Brassica napus HOM05D000135 ORTHO05D000816 1.0e-05 53.9 48 50.0
BolC6t40115H Brassica oleracea HOM05D000135 ORTHO05D000816 1.0e-05 53.9 48 50.0


User provided reference genes

Program Settings