Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G74.49 Capsicum annuum HOM05D004547 ORTHO05D005133 1.2e-158 563.1 294 100.0
CAN.G903.1 Capsicum annuum HOM05D004547 ORTHO05D005133 2.4e-66 256.5 253 62.5
CAN.G280.11 Capsicum annuum HOM05D004547 ORTHO05D005133 1.3e-46 191.0 138 77.5
CAN.G16.15 Capsicum annuum HOM05D004547 ORTHO05D005133 2.4e-45 186.8 232 52.2
Solyc05g006950.4 Solanum lycopersicum HOM05D004547 ORTHO05D005133 7.6e-44 181.8 236 51.7
PGSC0003DMG400017618 Solanum tuberosum HOM05D004547 ORTHO05D005133 1.0e-43 181.4 232 52.2
Sopen05g002910 Solanum pennellii HOM05D004547 ORTHO05D005133 1.3e-43 181.0 236 51.7
Peaxi162Scf00023g01214 Petunia axillaris HOM05D004547 ORTHO05D005133 1.2e-41 174.5 232 50.0
Nitab4.5_0004665g0060 Nicotiana tabacum HOM05D004547 ORTHO05D005133 5.1e-40 169.1 231 48.9
Nitab4.5_0000895g0220 Nicotiana tabacum HOM05D004547 ORTHO05D005133 5.7e-39 165.6 232 47.4
Lj1A979T84 Lonicera japonica HOM05D004547 ORTHO05D005133 2.5e-34 150.2 231 43.3
CAN.G118.7 Capsicum annuum HOM05D004547 ORTHO05D005133 1.6e-33 147.5 229 45.9
Thecc.03G155600 Theobroma cacao HOM05D004547 ORTHO05D005133 2.7e-33 146.7 226 42.0
Oeu022486.1 Olea europaea HOM05D004547 ORTHO05D005133 3.6e-33 146.4 234 42.3
TAR375G0699 Trochodendron aralioides HOM05D004547 ORTHO05D005133 4.6e-33 146.0 234 40.6
Duzib205G1908 Durio zibethinus HOM05D004547 ORTHO05D005133 7.9e-33 145.2 226 42.5
Gorai.008G216000 Gossypium raimondii HOM05D004547 ORTHO05D005133 7.9e-33 145.2 226 42.5
Gohir.D12G200900 Gossypium hirsutum HOM05D004547 ORTHO05D005133 1.0e-32 144.8 226 42.0
CiPaw.03G093300 Carya illinoinensis HOM05D004547 ORTHO05D005133 1.8e-32 144.1 233 41.2
Gohir.A12G198300 Gossypium hirsutum HOM05D004547 ORTHO05D005133 1.8e-32 144.1 226 41.6
MD01G1182800 Malus domestica HOM05D004547 ORTHO05D005133 1.8e-32 144.1 233 40.3
Sabra03G0075600 Salix brachista HOM05D004547 ORTHO05D005133 1.8e-32 144.1 253 39.9
Migut.F00479 Erythranthe guttata HOM05D004547 ORTHO05D005133 2.3e-32 143.7 234 41.5
Lalb_Chr03g0024271 Lupinus albus HOM05D004547 ORTHO05D005133 2.3e-32 143.7 231 42.0
SGA_v2.0_scaffold44G16547 Striga asiatica HOM05D004547 ORTHO05D005133 2.3e-32 143.7 227 43.6
CSS0028755 Camellia sinensis var. sinensis HOM05D004547 ORTHO05D005133 5.1e-32 142.5 232 40.5
Ciclev10004313m.g Citrus clementina HOM05D004547 ORTHO05D005133 8.7e-32 141.7 231 41.6
Cc02_g04280 Coffea canephora HOM05D004547 ORTHO05D005133 8.7e-32 141.7 234 41.9
Atru.chr1.728 Acer truncatum HOM05D004547 ORTHO05D005133 1.1e-31 141.4 229 40.2
DCAR_020189 Daucus carota HOM05D004547 ORTHO05D005133 1.1e-31 141.4 226 43.8
QL09p005748 Quercus lobata HOM05D004547 ORTHO05D005133 1.1e-31 141.4 233 41.6
TAR374G0871 Trochodendron aralioides HOM05D004547 ORTHO05D005133 1.1e-31 141.4 234 38.5
GSVIVG01018659001 Vitis vinifera HOM05D004547 ORTHO05D005133 1.1e-31 141.4 233 39.5
Lj3g0004511 Lotus japonicus HOM05D004547 ORTHO05D005133 1.5e-31 141.0 230 43.0
Prupe.2G277000 Prunus persica HOM05D004547 ORTHO05D005133 1.5e-31 141.0 233 39.9
BcaC03g14608 Brassica carinata HOM05D004547 ORTHO05D005133 2.5e-31 140.2 224 42.9
Dinv28576 Davidia involucrata HOM05D004547 ORTHO05D005133 3.3e-31 139.8 234 39.7
A02p12350 Brassica napus HOM05D004547 ORTHO05D005133 4.3e-31 139.4 224 42.9
Hma1.2p1_0432F.1_g151760 Hydrangea macrophylla HOM05D004547 ORTHO05D005133 4.3e-31 139.4 233 39.1
Manes.06G134600 Manihot esculenta HOM05D004547 ORTHO05D005133 4.3e-31 139.4 231 41.1
Actinidia31780 Actinidia chinensis HOM05D004547 ORTHO05D005133 5.7e-31 139.0 234 38.9
Aqoxy2G03231 Aquilegia oxysepala HOM05D004547 ORTHO05D005133 5.7e-31 139.0 234 39.3
C02p20480 Brassica napus HOM05D004547 ORTHO05D005133 5.7e-31 139.0 224 42.4
COL.COLO4_14121 Corchorus olitorius HOM05D004547 ORTHO05D005133 5.7e-31 139.0 222 41.9
SalBow5G1900 Salvia bowleyana HOM05D004547 ORTHO05D005133 5.7e-31 139.0 231 42.0
PGR042G2008 Punica granatum HOM05D004547 ORTHO05D005133 9.7e-31 138.3 232 39.7
SalBow5G5604 Salvia bowleyana HOM05D004547 ORTHO05D005133 1.6e-30 137.5 231 41.6
THA.LOC104811522 Tarenaya hassleriana HOM05D004547 ORTHO05D005133 3.7e-30 136.3 231 38.1
Cfa008167 Carpinus fangiana HOM05D004547 ORTHO05D005133 4.8e-30 136.0 232 40.5
BcaB08g35501 Brassica carinata HOM05D004547 ORTHO05D005133 6.3e-30 135.6 228 41.2
Sc14g0005530 Simmondsia chinensis HOM05D004547 ORTHO05D005133 6.3e-30 135.6 230 39.1
CANSAT56G3837 Cannabis sativa HOM05D004547 ORTHO05D005133 8.2e-30 135.2 231 41.1
FvH4_7g27490 Fragaria vesca HOM05D004547 ORTHO05D005133 8.2e-30 135.2 233 39.9
FAN01G0567 Fragaria x ananassa HOM05D004547 ORTHO05D005133 8.2e-30 135.2 233 39.9
FAN03G1184 Fragaria x ananassa HOM05D004547 ORTHO05D005133 8.2e-30 135.2 233 39.9
FAN06G1879 Fragaria x ananassa HOM05D004547 ORTHO05D005133 8.2e-30 135.2 233 39.9
ClCG05G007360 Citrullus lanatus HOM05D004547 ORTHO05D005133 1.1e-29 134.8 231 39.0
Rhsim03G0167200 Rhododendron simsii HOM05D004547 ORTHO05D005133 1.1e-29 134.8 235 40.4
RcHm_v2.0_Chr1g0374281 Rosa chinensis HOM05D004547 ORTHO05D005133 1.1e-29 134.8 233 39.1
A10p09340 Brassica napus HOM05D004547 ORTHO05D005133 1.4e-29 134.4 228 40.8
BraA10t43010Z Brassica rapa HOM05D004547 ORTHO05D005133 1.4e-29 134.4 228 40.8
CsaV3_3G016130 Cucumis sativus L. HOM05D004547 ORTHO05D005133 1.4e-29 134.4 231 39.0
arahy.Tifrunner.gnm1.ann1.J7T2TK Arachis hypogaea HOM05D004547 ORTHO05D005133 1.8e-29 134.0 231 41.6
Eucgr.A02893 Eucalyptus grandis HOM05D004547 ORTHO05D005133 1.8e-29 134.0 233 37.8
arahy.Tifrunner.gnm1.ann1.TL2CDN Arachis hypogaea HOM05D004547 ORTHO05D005133 2.4e-29 133.7 231 41.1
Psat0s2825g0040 Pisum sativum HOM05D004547 ORTHO05D005133 2.4e-29 133.7 231 41.1
Sp6g13590 Schrenkiella parvula HOM05D004547 ORTHO05D005133 2.4e-29 133.7 230 40.9
Carub.0008s1145 Capsella rubella HOM05D004547 ORTHO05D005133 3.1e-29 133.3 230 40.9
Glyma.09G224000 Glycine max HOM05D004547 ORTHO05D005133 4.1e-29 132.9 231 41.1
Glyma.12G013000 Glycine max HOM05D004547 ORTHO05D005133 5.3e-29 132.5 231 41.1
Aa31sc202G10 Aethionema arabicum HOM05D004547 ORTHO05D005133 6.9e-29 132.1 231 39.8
CARHR264160 Cardamine hirsuta HOM05D004547 ORTHO05D005133 6.9e-29 132.1 230 40.4
MELO3C006811.2 Cucumis melo HOM05D004547 ORTHO05D005133 6.9e-29 132.1 231 38.5
Sed0001089 Sechium edule HOM05D004547 ORTHO05D005133 6.9e-29 132.1 231 38.5
MD07G1253600 Malus domestica HOM05D004547 ORTHO05D005133 9.1e-29 131.7 236 39.4
AL8G25720 Arabidopsis lyrata HOM05D004547 ORTHO05D005133 1.2e-28 131.3 230 40.4
BcaC04g20676 Brassica carinata HOM05D004547 ORTHO05D005133 1.2e-28 131.3 228 39.9
C09p40720 Brassica napus HOM05D004547 ORTHO05D005133 1.2e-28 131.3 228 39.9
BolC9t56951H Brassica oleracea HOM05D004547 ORTHO05D005133 1.2e-28 131.3 228 39.9
Potri.003G109100 Populus trichocarpa HOM05D004547 ORTHO05D005133 1.2e-28 131.3 231 39.0
Cpa.g.sc3.324 Carica papaya HOM05D004547 ORTHO05D005133 1.5e-28 131.0 234 38.5
Thhalv10012691m.g Eutrema salsugineum HOM05D004547 ORTHO05D005133 1.5e-28 131.0 230 40.9
AT5G51430 Arabidopsis thaliana HOM05D004547 ORTHO05D005133 2.0e-28 130.6 230 40.0
Medtr6g005610 Medicago truncatula HOM05D004547 ORTHO05D005133 2.0e-28 130.6 226 40.3
Nn1g01023 Nelumbo nucifera HOM05D004547 ORTHO05D005133 2.0e-28 130.6 233 38.6
VMungo1127G1242 Vigna mungo HOM05D004547 ORTHO05D005133 2.0e-28 130.6 231 39.8
MSTRG.8826 Avicennia marina HOM05D004547 ORTHO05D005133 2.6e-28 130.2 234 39.7
TPR.G20262 Trifolium pratense HOM05D004547 ORTHO05D005133 2.6e-28 130.2 231 40.3
PSO266G0090 Papaver somniferum HOM05D004547 ORTHO05D005133 4.5e-28 129.4 234 38.0
PSO384G4058 Papaver somniferum HOM05D004547 ORTHO05D005133 4.5e-28 129.4 234 38.0
Lsat_1_v5_gn_9_52061 Lactuca sativa HOM05D004547 ORTHO05D005133 7.7e-28 128.6 225 40.9
ECA232G2122 Erigeron canadensis HOM05D004547 ORTHO05D005133 2.2e-27 127.1 232 40.9
Phvul.011G016000 Phaseolus vulgaris HOM05D004547 ORTHO05D005133 2.2e-27 127.1 231 39.8
Sed0008837 Sechium edule HOM05D004547 ORTHO05D005133 2.2e-27 127.1 231 38.1
Medtr0004s0490 Medicago truncatula HOM05D004547 ORTHO05D005133 2.9e-27 126.7 231 39.4
Ca_19628_v3 Cicer arietinum L. HOM05D004547 ORTHO05D005133 5.0e-27 125.9 229 39.7
vmacro06799 Vaccinium macrocarpon HOM05D004547 ORTHO05D005133 1.1e-26 124.8 235 39.1
HanXRQChr16g0512771 Helianthus annuus HOM05D004547 ORTHO05D005133 2.5e-26 123.6 230 40.0
TWI39G0203 Tripterygium wilfordii HOM05D004547 ORTHO05D005133 3.2e-26 123.2 229 39.3
AUR62022938 Chenopodium quinoa HOM05D004547 ORTHO05D005133 3.6e-25 119.8 226 36.7
Medtr6g005670 Medicago truncatula HOM05D004547 ORTHO05D005133 4.6e-25 119.4 226 38.9
CAN.G689.6 Capsicum annuum HOM05D004547 ORTHO05D005133 2.3e-24 117.1 82 80.5
Zm00001eb389950 Zea mays HOM05D004547 ORTHO05D005133 3.9e-24 116.3 224 36.6
CDE04G0004 Ceratophyllum demersum HOM05D004547 ORTHO05D005133 6.7e-24 115.5 91 64.8
Hund13892 Selenicereus undatus HOM05D004547 ORTHO05D005133 6.7e-24 115.5 227 36.6
Hma1.2p1_0432F.1_g151750 Hydrangea macrophylla HOM05D004547 ORTHO05D005133 1.1e-23 114.8 88 65.9
HPP92_005328 Vanilla planifolia HOM05D004547 ORTHO05D005133 1.1e-23 114.8 229 36.2
EL10Ac2g04890 Beta vulgaris HOM05D004547 ORTHO05D005133 1.5e-23 114.4 232 37.9
unitig_37.g11930 Utricularia gibba HOM05D004547 ORTHO05D005133 2.0e-23 114.0 233 37.3
ATR0317G078 Amborella trichopoda HOM05D004547 ORTHO05D005133 2.6e-23 113.6 235 34.5
CARHR150020 Cardamine hirsuta HOM05D004547 ORTHO05D005133 2.6e-23 113.6 221 35.3
AUR62012299 Chenopodium quinoa HOM05D004547 ORTHO05D005133 1.3e-22 111.3 131 51.9
HPP92_005319 Vanilla planifolia HOM05D004547 ORTHO05D005133 4.8e-22 109.4 205 35.6
Ah.10g036230 Amaranthus hybridus HOM05D004547 ORTHO05D005133 1.4e-21 107.8 91 61.5
FAN06G1216 Fragaria x ananassa HOM05D004547 ORTHO05D005133 3.8e-19 99.8 84 64.3
Oeu042559.1 Olea europaea HOM05D004547 ORTHO05D005133 1.4e-18 97.8 83 67.5
SEGI_05738 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 9.4e-18 95.1 106 50.0
Pp3c7_60 Physcomitrium patens HOM05D004547 ORTHO05D005133 1.4e-16 91.3 86 53.5
Nitab4.5_0004558g0010 Nicotiana tabacum HOM05D004547 ORTHO05D016189 1.8e-16 90.9 93 55.9
CAN.G689.5 Capsicum annuum HOM05D004547 ORTHO05D005133 3.9e-16 89.7 64 78.1
SMO134G0015 Selaginella moellendorffii HOM05D004547 ORTHO05D005133 5.7e-15 85.9 209 32.5
Mapoly0007s0274 Marchantia polymorpha HOM05D004547 ORTHO05D005133 3.7e-14 83.2 88 48.9
CBR_g31542 Chara braunii HOM05D004547 ORTHO05D005133 8.2e-14 82.0 129 37.2
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis HOM05D004547 ORTHO05D005133 4.1e-13 79.7 88 47.7
CDE04G0650 Ceratophyllum demersum HOM05D004547 ORTHO05D005133 1.7e-11 74.3 152 33.6
Actinidia24695 Actinidia chinensis HOM05D004547 ORTHO05D005133 2.5e-10 70.5 63 55.6
Sopen04g018620 Solanum pennellii HOM05D000017 ORTHO05D000013 3.6e-09 66.6 68 52.9
Sopen02g005760 Solanum pennellii HOM05D000017 ORTHO05D000013 6.7e-08 62.4 67 52.2
Sopen03g035430 Solanum pennellii HOM05D000017 ORTHO05D000013 6.7e-08 62.4 67 52.2
Sopen04g025960 Solanum pennellii HOM05D000017 ORTHO05D000013 6.7e-08 62.4 67 52.2
Sopen08g018320 Solanum pennellii HOM05D000017 ORTHO05D000013 6.7e-08 62.4 67 52.2
CAN.G407.125 Capsicum annuum HOM05D000017 ORTHO05D000013 2.2e-06 57.4 65 46.2
Nitab4.5_0011021g0010 Nicotiana tabacum HOM05D001522 ORTHO05D016189 6.3e-06 55.8 91 37.4


User provided reference genes

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