Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G74.39 Capsicum annuum HOM05D005798 ORTHO05D007269 4.0e-81 304.7 152 100.0
CAN.G1480.2 Capsicum annuum HOM05D005798 ORTHO05D007269 3.5e-69 265.0 152 88.8
Sopen01g035220 Solanum pennellii HOM05D005798 ORTHO05D007269 5.9e-64 247.7 152 83.6
Solyc01g088390.3 Solanum lycopersicum HOM05D005798 ORTHO05D007269 1.0e-63 246.9 152 82.9
PGSC0003DMG400001703 Solanum tuberosum HOM05D005798 ORTHO05D007269 1.0e-63 246.9 152 84.2
Nitab4.5_0009219g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 2.2e-58 229.2 152 78.3
Nitab4.5_0013532g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 2.2e-58 229.2 152 78.9
Peaxi162Scf01124g00121 Petunia axillaris HOM05D005798 ORTHO05D007269 2.8e-58 228.8 152 79.6
Lj7C553T5 Lonicera japonica HOM05D005798 ORTHO05D007269 1.0e-44 183.7 152 63.2
CSS0042045 Camellia sinensis var. sinensis HOM05D005798 ORTHO05D007269 3.9e-44 181.8 153 63.4
vmacro21093 Vaccinium macrocarpon HOM05D005798 ORTHO05D007269 8.8e-44 180.6 152 61.2
Dinv43575 Davidia involucrata HOM05D005798 ORTHO05D007269 2.6e-43 179.1 145 69.0
QL04p025438 Quercus lobata HOM05D005798 ORTHO05D007269 1.7e-42 176.4 143 65.7
CiPaw.13G020800 Carya illinoinensis HOM05D005798 ORTHO05D007269 4.8e-42 174.9 141 68.1
TAR375G0847 Trochodendron aralioides HOM05D005798 ORTHO05D007269 4.8e-42 174.9 146 66.4
Cc02_g25760 Coffea canephora HOM05D005798 ORTHO05D007269 1.4e-41 173.3 140 65.0
Rhsim01G0145000 Rhododendron simsii HOM05D005798 ORTHO05D007269 7.0e-41 171.0 153 59.5
GSVIVG01018418001 Vitis vinifera HOM05D005798 ORTHO05D007269 7.0e-41 171.0 146 62.3
Atru.chr5.52 Acer truncatum HOM05D005798 ORTHO05D007269 1.2e-40 170.2 143 65.7
TWI59G0898 Tripterygium wilfordii HOM05D005798 ORTHO05D007269 1.2e-40 170.2 141 62.4
Actinidia33294 Actinidia chinensis HOM05D005798 ORTHO05D007269 2.0e-40 169.5 152 58.6
Atru.chr5.24 Acer truncatum HOM05D005798 ORTHO05D007269 4.5e-40 168.3 143 65.0
Migut.B01472 Erythranthe guttata HOM05D005798 ORTHO05D007269 1.3e-39 166.8 144 63.2
CANSAT21G0894 Cannabis sativa HOM05D005798 ORTHO05D007269 6.5e-39 164.5 138 63.0
Ciclev10020482m.g Citrus clementina HOM05D005798 ORTHO05D007269 6.5e-39 164.5 148 60.8
Haze_02923 Corylus avellana HOM05D005798 ORTHO05D007269 6.5e-39 164.5 158 60.1
Lj1g0019008 Lotus japonicus HOM05D005798 ORTHO05D007269 6.5e-39 164.5 141 61.0
Medtr0103s0100 Medicago truncatula HOM05D005798 ORTHO05D007269 8.5e-39 164.1 152 57.9
MSTRG.20650 Avicennia marina HOM05D005798 ORTHO05D007269 2.5e-38 162.5 144 59.7
FAN26G0835 Fragaria x ananassa HOM05D005798 ORTHO05D007269 2.5e-38 162.5 136 62.5
FAN23G2651 Fragaria x ananassa HOM05D005798 ORTHO05D007269 4.2e-38 161.8 136 62.5
Psat3g172680 Pisum sativum HOM05D005798 ORTHO05D007269 4.2e-38 161.8 150 56.0
arahy.Tifrunner.gnm1.ann1.1MA0KJ Arachis hypogaea HOM05D005798 ORTHO05D007269 5.5e-38 161.4 143 58.7
Duzib128G1323 Durio zibethinus HOM05D005798 ORTHO05D007269 5.5e-38 161.4 150 58.0
RcHm_v2.0_Chr1g0343251 Rosa chinensis HOM05D005798 ORTHO05D007269 5.5e-38 161.4 136 62.5
HanXRQChr16g0519531 Helianthus annuus HOM05D005798 ORTHO05D007269 7.2e-38 161.0 151 57.6
MD07G1086000 Malus domestica HOM05D005798 ORTHO05D007269 1.2e-37 160.2 140 59.3
Phvul.005G016200 Phaseolus vulgaris HOM05D005798 ORTHO05D007269 1.2e-37 160.2 152 59.2
Sabra16G0226600 Salix brachista HOM05D005798 ORTHO05D007269 1.6e-37 159.8 139 60.4
ECA234G4178 Erigeron canadensis HOM05D005798 ORTHO05D007269 2.1e-37 159.5 142 57.7
MD02G1227400 Malus domestica HOM05D005798 ORTHO05D007269 2.1e-37 159.5 140 60.7
Potri.001G346900 Populus trichocarpa HOM05D005798 ORTHO05D007269 2.7e-37 159.1 139 60.4
Hund17139 Selenicereus undatus HOM05D005798 ORTHO05D007269 2.7e-37 159.1 141 58.9
arahy.Tifrunner.gnm1.ann1.6FN2NF Arachis hypogaea HOM05D005798 ORTHO05D007269 6.1e-37 157.9 143 58.0
Eucgr.D01150 Eucalyptus grandis HOM05D005798 ORTHO05D007269 8.0e-37 157.5 148 60.8
Prupe.2G112300 Prunus persica HOM05D005798 ORTHO05D007269 8.0e-37 157.5 140 60.0
FvH4_1g25731 Fragaria vesca HOM05D005798 ORTHO05D007269 1.0e-36 157.1 136 61.0
MELO3C006251.2 Cucumis melo HOM05D005798 ORTHO05D007269 2.3e-36 156.0 148 56.8
Lalb_Chr19g0126311 Lupinus albus HOM05D005798 ORTHO05D007269 3.0e-36 155.6 144 59.0
CsaV3_3G010280 Cucumis sativus L. HOM05D005798 ORTHO05D007269 4.0e-36 155.2 148 56.8
FAN28G0191 Fragaria x ananassa HOM05D005798 ORTHO05D007269 4.0e-36 155.2 136 59.6
Nn1g07358 Nelumbo nucifera HOM05D005798 ORTHO05D007269 4.0e-36 155.2 137 63.5
Thecc.10G001400 Theobroma cacao HOM05D005798 ORTHO05D007269 4.0e-36 155.2 150 56.0
VMungo1080G0989 Vigna mungo HOM05D005798 ORTHO05D007269 5.2e-36 154.8 150 56.7
Gorai.011G295600 Gossypium raimondii HOM05D005798 ORTHO05D007269 1.2e-35 153.7 140 60.0
THA.LOC104817171 Tarenaya hassleriana HOM05D005798 ORTHO05D007269 1.2e-35 153.7 146 57.5
AUR62031252 Chenopodium quinoa HOM05D005798 ORTHO05D007269 2.6e-35 152.5 141 56.7
Gohir.A10G242600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 2.6e-35 152.5 140 60.0
Nn2g10726 Nelumbo nucifera HOM05D005798 ORTHO05D007269 2.6e-35 152.5 137 62.8
Prupe.2G112500 Prunus persica HOM05D005798 ORTHO05D007269 2.6e-35 152.5 136 61.0
Ca_03850_v3 Cicer arietinum L. HOM05D005798 ORTHO05D007269 3.3e-35 152.1 141 57.4
Glyma.04G128400 Glycine max HOM05D005798 ORTHO05D007269 3.3e-35 152.1 153 54.2
Sed0012756 Sechium edule HOM05D005798 ORTHO05D007269 5.7e-35 151.4 150 54.7
Gohir.D10G254600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 9.7e-35 150.6 140 59.3
Manes.05G060100 Manihot esculenta HOM05D005798 ORTHO05D007269 9.7e-35 150.6 139 60.4
PGR004G0434 Punica granatum HOM05D005798 ORTHO05D007269 9.7e-35 150.6 142 55.6
Glyma.06G310400 Glycine max HOM05D005798 ORTHO05D007269 1.3e-34 150.2 143 55.2
unitig_52.g17377 Utricularia gibba HOM05D005798 ORTHO05D007269 2.2e-34 149.4 143 55.9
EL10Ac8g19272 Beta vulgaris HOM05D005798 ORTHO05D007269 2.8e-34 149.1 137 57.7
AUR62027448 Chenopodium quinoa HOM05D005798 ORTHO05D007269 2.8e-34 149.1 141 56.0
PGR004G1878 Punica granatum HOM05D005798 ORTHO05D007269 4.8e-34 148.3 142 55.6
SGA_v2.0_scaffold17G08178 Striga asiatica HOM05D005798 ORTHO05D007269 6.3e-34 147.9 140 57.1
ClCG05G002770 Citrullus lanatus HOM05D005798 ORTHO05D007269 2.4e-33 146.0 148 55.4
Aa31LG1G26140 Aethionema arabicum HOM05D005798 ORTHO05D007269 5.3e-33 144.8 138 54.3
CDE06G2636 Ceratophyllum demersum HOM05D005798 ORTHO05D007269 9.1e-33 144.1 141 55.3
Ah.14g086050 Amaranthus hybridus HOM05D005798 ORTHO05D007269 1.0e-31 140.6 136 50.7
Sc26g0001830 Simmondsia chinensis HOM05D005798 ORTHO05D007269 5.0e-31 138.3 141 51.8
PSO017G1219 Papaver somniferum HOM05D005798 ORTHO05D007269 6.5e-31 137.9 139 53.2
PSO782G4885 Papaver somniferum HOM05D005798 ORTHO05D007269 6.5e-31 137.9 139 53.2
MBI05_g22048_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 1.5e-30 136.7 138 52.9
CARHR139800 Cardamine hirsuta HOM05D005798 ORTHO05D007269 1.9e-30 136.3 138 50.7
BcaB02g08835 Brassica carinata HOM05D005798 ORTHO05D007269 3.2e-30 135.6 139 55.4
HPP92_011679 Vanilla planifolia HOM05D005798 ORTHO05D007269 4.2e-30 135.2 154 50.6
BraA05t19450Z Brassica rapa HOM05D005798 ORTHO05D007269 5.5e-30 134.8 138 54.3
A05p04740 Brassica napus HOM05D005798 ORTHO05D007269 7.2e-30 134.4 138 54.3
AL4G43620 Arabidopsis lyrata HOM05D005798 ORTHO05D007269 9.4e-30 134.0 137 51.8
BcaC02g12292 Brassica carinata HOM05D005798 ORTHO05D007269 2.1e-29 132.9 138 53.6
C04p05550 Brassica napus HOM05D005798 ORTHO05D007269 2.1e-29 132.9 138 53.6
Oeu024375.1 Olea europaea HOM05D005798 ORTHO05D007269 2.1e-29 132.9 125 57.6
Oeu024376.1 Olea europaea HOM05D005798 ORTHO05D007269 2.1e-29 132.9 125 57.6
BolC4t22185H Brassica oleracea HOM05D005798 ORTHO05D007269 2.7e-29 132.5 138 53.6
Thhalv10001723m.g Eutrema salsugineum HOM05D005798 ORTHO05D007269 2.7e-29 132.5 138 52.9
Sp4g26670 Schrenkiella parvula HOM05D005798 ORTHO05D007269 3.6e-29 132.1 137 53.3
PSO063G7295 Papaver somniferum HOM05D005798 ORTHO05D007269 4.7e-29 131.7 149 49.0
AT2G44580 Arabidopsis thaliana HOM05D005798 ORTHO05D007269 6.1e-29 131.3 138 51.4
Carub.0004s2713 Capsella rubella HOM05D005798 ORTHO05D007269 1.0e-28 130.6 138 50.7
Zm00001eb112030 Zea mays HOM05D005798 ORTHO05D007269 2.6e-27 125.9 144 49.3
SEGI_02869 Sequoiadendron giganteum HOM05D005798 ORTHO05D007269 2.8e-26 122.5 137 47.4
Nn3g19415 Nelumbo nucifera HOM05D005798 ORTHO05D007269 4.5e-24 115.2 88 68.2
Os05g0119600 Oryza sativa ssp. japonica HOM05D005798 ORTHO05D007269 7.7e-24 114.4 129 50.4
CAN.G195.33 Capsicum annuum HOM05D005798 ORTHO05D007269 5.5e-22 108.2 72 79.2
ATR0585G014 Amborella trichopoda HOM05D005798 ORTHO05D007269 1.4e-20 103.6 152 46.7
TPR.G30814 Trifolium pratense HOM05D005798 ORTHO05D007269 2.3e-20 102.8 86 60.5
Pp3c5_22720 Physcomitrium patens HOM05D005798 ORTHO05D007269 2.4e-17 92.8 137 40.9
AagrBONN_evm.TU.Sc2ySwM_344.2100 Anthoceros agrestis HOM05D005798 ORTHO05D007269 1.4e-12 77.0 122 42.6
Mapoly0001s0452 Marchantia polymorpha HOM05D005798 ORTHO05D007269 2.6e-11 72.8 138 31.9
COL.COLO4_19318 Corchorus olitorius HOM05D005798 ORTHO05D007269 1.4e-09 67.0 65 55.4
CBR_g39622 Chara braunii HOM05D000017 ORTHO05D000013 6.6e-07 58.2 161 29.8


User provided reference genes

Program Settings