Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G735.4 Capsicum annuum HOM05D003617 ORTHO05D010478 5.1e-66 254.2 123 100.0
CAN.G108.23 Capsicum annuum HOM05D003617 ORTHO05D010478 2.4e-44 182.2 118 76.3
CAN.G67.13 Capsicum annuum HOM05D003617 ORTHO05D010478 3.9e-42 174.9 117 76.1
CAN.G1658.3 Capsicum annuum HOM05D003617 ORTHO05D010478 5.1e-42 174.5 118 76.3
CAN.G275.8 Capsicum annuum HOM05D003617 ORTHO05D010478 5.1e-42 174.5 111 78.4
CAN.G626.1 Capsicum annuum HOM05D003617 ORTHO05D010478 5.6e-41 171.0 110 77.3
CAN.G908.5 Capsicum annuum HOM05D003617 ORTHO05D010478 4.8e-40 167.9 113 77.0
CAN.G1445.3 Capsicum annuum HOM05D003617 ORTHO05D010478 6.2e-40 167.5 118 72.0
CAN.G1329.39 Capsicum annuum HOM05D003617 ORTHO05D010478 9.0e-39 163.7 118 71.2
PGSC0003DMG400012065 Solanum tuberosum HOM05D003617 ORTHO05D010478 2.1e-35 152.5 115 67.0
PGSC0003DMG400042344 Solanum tuberosum HOM05D000995 ORTHO05D010478 2.1e-35 152.5 114 65.8
CAN.G135.3 Capsicum annuum HOM05D003617 ORTHO05D010478 1.8e-34 149.4 103 70.9
PGSC0003DMG400044625 Solanum tuberosum HOM05D003617 ORTHO05D010478 1.8e-34 149.4 120 64.2
CAN.G1323.7 Capsicum annuum HOM05D003617 ORTHO05D010478 6.7e-34 147.5 121 67.8
CAN.G626.3 Capsicum annuum HOM05D003617 ORTHO05D010478 1.5e-33 146.4 101 74.3
PGSC0003DMG400045242 Solanum tuberosum HOM05D003617 ORTHO05D010478 3.3e-33 145.2 115 64.3
PGSC0003DMG400044879 Solanum tuberosum HOM05D000995 ORTHO05D001773 9.6e-33 143.7 112 62.5
Sopen11g010720 Solanum pennellii HOM05D003617 ORTHO05D007165 1.6e-32 142.9 115 63.5
PGSC0003DMG400039284 Solanum tuberosum HOM05D003617 ORTHO05D010478 2.2e-29 132.5 114 61.4
PGSC0003DMG400046252 Solanum tuberosum HOM05D000995 ORTHO05D010478 2.2e-29 132.5 115 61.7
Sopen12g026610 Solanum pennellii HOM05D003617 ORTHO05D010478 3.8e-29 131.7 115 57.4
Sopen05g012010 Solanum pennellii HOM05D000002 ORTHO05D010478 1.1e-28 130.2 115 58.3
PGSC0003DMG400044334 Solanum tuberosum HOM05D003617 ORTHO05D010478 1.9e-28 129.4 116 58.6
Sopen05g021300 Solanum pennellii HOM05D000995 ORTHO05D012246 7.1e-28 127.5 110 60.0
PGSC0003DMG400042314 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.2e-27 126.7 107 59.8
Nitab4.5_0000423g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.3e-26 122.5 116 56.9
Nitab4.5_0000109g0010 Nicotiana tabacum HOM05D000995 ORTHO05D010478 3.3e-25 118.6 115 53.9
PGSC0003DMG400023003 Solanum tuberosum HOM05D000995 ORTHO05D000638 2.2e-24 115.9 89 65.2
Nitab4.5_0004315g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.0e-22 109.4 109 55.0
PGSC0003DMG400043386 Solanum tuberosum HOM05D003617 ORTHO05D010478 3.4e-22 108.6 89 61.8
Sopen01g028500 Solanum pennellii HOM05D003617 ORTHO05D000001 5.9e-22 107.8 85 61.2
CAN.G587.67 Capsicum annuum HOM05D003617 ORTHO05D010478 6.5e-21 104.4 119 51.3
Sopen02g010350 Solanum pennellii HOM05D003617 ORTHO05D010478 6.5e-21 104.4 110 55.5
Nitab4.5_0001101g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.2e-20 102.1 110 50.9
Peaxi162Scf00466g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 9.3e-20 100.5 113 48.7
Sopen07g020760 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-19 99.8 72 66.7
Nitab4.5_0005533g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.6e-19 98.6 89 58.4
Sopen06g006570 Solanum pennellii HOM05D000995 ORTHO05D002620 2.3e-18 95.9 109 51.4
Nitab4.5_0001586g0180 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.7e-18 94.4 91 54.9
Nitab4.5_0008204g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 6.7e-18 94.4 105 52.4
Nitab4.5_0001995g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 8.8e-18 94.0 114 45.6
Nitab4.5_0002555g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 8.8e-18 94.0 93 54.8
Nitab4.5_0024231g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.5e-17 93.2 91 54.9
Nitab4.5_0017311g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.5e-17 92.4 93 53.8
Nitab4.5_0022539g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.5e-17 92.4 94 53.2
Nitab4.5_0003317g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.3e-17 92.0 86 55.8
Nitab4.5_0003882g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.3e-17 91.7 101 51.5
Nitab4.5_0022539g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.3e-17 91.7 86 55.8
Nitab4.5_0000300g0220 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.7e-17 91.3 85 56.5
Nitab4.5_0000836g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.4e-17 90.9 85 56.5
Nitab4.5_0003317g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 9.7e-17 90.5 90 54.4
Nitab4.5_0001081g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.8e-16 88.2 83 55.4
PGSC0003DMG400040544 Solanum tuberosum HOM05D003617 ORTHO05D007165 6.3e-16 87.8 64 65.6
Nitab4.5_0005492g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.1e-15 85.5 85 54.1
Nitab4.5_0000095g0090 Nicotiana tabacum HOM05D003617 ORTHO05D010478 6.9e-15 84.3 94 46.8
Nitab4.5_0006184g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.6e-14 82.4 85 52.9
Nitab4.5_0000048g0120 Nicotiana tabacum HOM05D003617 ORTHO05D010478 7.7e-14 80.9 95 47.4
Nitab4.5_0000419g0120 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.0e-13 80.5 82 51.2
PGSC0003DMG400007485 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.0e-13 80.5 83 50.6
Nitab4.5_0004914g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.3e-13 80.1 91 50.5
PGSC0003DMG400003176 Solanum tuberosum HOM05D003617 ORTHO05D010478 1.7e-13 79.7 117 41.0
Nitab4.5_0002671g0080 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.8e-13 78.6 93 49.5
Nitab4.5_0004188g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.0e-13 78.2 85 47.1
PGSC0003DMG400015099 Solanum tuberosum HOM05D000995 ORTHO05D007165 6.5e-13 77.8 119 40.3
Nitab4.5_0011017g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.2e-12 75.5 73 53.4
PGSC0003DMG400034797 Solanum tuberosum HOM05D000995 ORTHO05D010478 5.5e-12 74.7 119 39.5
Nitab4.5_0004591g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 7.2e-12 74.3 84 52.4
Nitab4.5_0000263g0210 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.1e-11 72.8 82 48.8
Nitab4.5_0000481g0030 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.0e-10 70.5 108 38.0
PGSC0003DMG400035791 Solanum tuberosum HOM05D000995 ORTHO05D000638 1.4e-10 70.1 57 63.2
Nitab4.5_0000004g0300 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.0e-10 68.9 96 41.7
Nitab4.5_0003674g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 5.1e-10 68.2 103 39.8
Nitab4.5_0005517g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.0e-09 66.2 68 50.0
CAN.G370.37 Capsicum annuum HOM05D003617 ORTHO05D010478 2.6e-09 65.9 104 40.4
CAN.G1362.2 Capsicum annuum HOM05D003617 ORTHO05D010478 7.4e-09 64.3 89 42.7
Nitab4.5_0001939g0070 Nicotiana tabacum HOM05D003617 ORTHO05D010478 7.4e-09 64.3 68 48.5
Nitab4.5_0002397g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.8e-08 61.6 68 47.1
Peaxi162Scf00883g00081 Petunia axillaris HOM05D003617 ORTHO05D007165 4.8e-08 61.6 105 35.2
Peaxi162Scf00991g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 1.8e-07 59.7 77 40.3
CAN.G68.7 Capsicum annuum HOM05D003617 ORTHO05D010478 3.1e-07 58.9 94 39.4
Nitab4.5_0022154g0010 Nicotiana tabacum HOM05D000995 ORTHO05D000638 5.3e-07 58.2 54 59.3
Peaxi162Scf00148g00142 Petunia axillaris HOM05D003617 ORTHO05D007165 9.1e-07 57.4 77 39.0
Nitab4.5_0002289g0150 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.9e-06 54.7 53 54.7
Peaxi162Scf00658g00027 Petunia axillaris HOM05D003617 ORTHO05D007165 5.9e-06 54.7 105 38.1
PGSC0003DMG400036228 Solanum tuberosum HOM05D000995 ORTHO05D001773 5.9e-06 54.7 59 47.5


User provided reference genes

Program Settings