Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 2.6e-264 914.8 458 100.0
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 6.6e-228 793.9 451 88.9
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 1.8e-225 785.8 451 88.0
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 3.9e-220 768.1 459 85.4
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 4.2e-214 748.0 462 82.7
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 2.8e-210 735.3 457 81.0
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 1.4e-209 733.0 458 82.1
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 9.0e-209 730.3 460 80.7
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 1.5e-208 729.6 459 81.9
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 2.0e-208 729.2 459 81.9
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 4.5e-208 728.0 458 80.3
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 1.3e-207 726.5 457 80.5
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 1.3e-207 726.5 457 79.9
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 1.7e-207 726.1 474 77.6
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 2.4e-206 722.2 458 80.6
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 7.1e-206 720.7 459 79.3
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 9.3e-206 720.3 459 78.6
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 9.3e-206 720.3 476 77.1
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 9.3e-206 720.3 458 80.8
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 1.6e-205 719.5 459 78.6
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 2.1e-205 719.2 457 79.6
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 3.5e-205 718.4 458 79.3
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 3.5e-205 718.4 476 77.1
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 3.5e-205 718.4 455 79.8
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 6.0e-205 717.6 457 80.1
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 1.3e-204 716.5 459 78.9
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 1.8e-204 716.1 458 79.7
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 1.8e-204 716.1 458 78.6
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 2.3e-204 715.7 461 78.5
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 5.1e-204 714.5 459 78.9
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 8.7e-204 713.8 458 79.5
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 1.1e-203 713.4 458 77.9
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 1.5e-203 713.0 457 78.8
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 1.5e-203 713.0 457 79.2
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 2.1e-202 709.1 460 78.7
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 2.8e-202 708.8 457 78.3
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 1.1e-201 706.8 458 78.8
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 1.8e-201 706.1 458 77.7
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 2.4e-201 705.7 458 78.6
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 2.4e-201 705.7 460 78.3
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 6.9e-201 704.1 458 76.9
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 9.0e-201 703.7 458 78.8
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 9.0e-201 703.7 458 78.2
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 1.5e-200 703.0 458 78.4
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 1.5e-200 703.0 460 77.6
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 2.0e-200 702.6 458 77.5
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 2.0e-200 702.6 455 78.9
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 2.6e-200 702.2 458 78.2
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 3.4e-200 701.8 457 78.6
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 4.5e-200 701.4 458 77.3
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 1.7e-199 699.5 459 79.1
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 2.9e-199 698.7 458 78.2
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 3.8e-199 698.4 457 77.9
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 8.4e-199 697.2 458 78.4
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 8.4e-199 697.2 458 77.1
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 8.4e-199 697.2 458 76.0
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 8.4e-199 697.2 473 76.3
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 3.2e-198 695.3 459 76.9
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 3.2e-198 695.3 404 84.2
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 4.2e-198 694.9 404 83.9
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 7.1e-198 694.1 404 84.4
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 3.5e-197 691.8 404 83.7
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 3.5e-197 691.8 464 76.3
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 1.0e-196 690.3 464 76.1
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 2.3e-196 689.1 449 77.7
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 3.9e-196 688.3 404 83.7
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 6.7e-196 687.6 404 83.4
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 1.1e-195 686.8 394 85.3
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 1.1e-195 686.8 459 76.0
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 1.9e-195 686.0 394 85.0
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 1.9e-195 686.0 524 70.0
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 1.3e-194 683.3 468 75.0
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 4.8e-194 681.4 406 83.3
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 1.8e-193 679.5 383 86.7
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 3.1e-193 678.7 383 86.7
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 1.5e-192 676.4 426 78.4
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 5.8e-192 674.5 459 74.5
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 5.8e-192 674.5 459 74.5
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 1.7e-191 672.9 454 75.1
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 5.5e-190 667.9 454 76.0
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 1.5e-187 659.8 362 89.0
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 2.5e-187 659.1 460 73.5
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 2.8e-186 655.6 381 82.4
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 4.8e-186 654.8 466 73.2
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 2.0e-184 649.4 458 74.5
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 9.3e-182 640.6 357 87.4
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 3.3e-179 632.1 456 73.2
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 9.7e-179 630.6 457 72.0
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 2.8e-178 629.0 394 79.4
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 7.7e-176 620.9 370 81.9
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 4.6e-173 611.7 407 74.9
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 8.8e-172 607.4 332 89.2
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 7.7e-168 594.3 332 87.7
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 1.1e-161 573.9 472 63.3
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 9.1e-161 570.9 382 71.2
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 2.6e-160 569.3 432 66.4
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 7.2e-158 561.2 359 80.8
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 8.8e-156 554.3 362 77.9
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 1.2e-155 553.9 385 76.1
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 2.6e-155 552.7 400 67.5
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 1.5e-147 526.9 296 87.5
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 2.3e-140 503.1 279 87.8
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 5.9e-136 488.4 407 60.9
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 5.6e-134 481.9 272 84.9
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 7.5e-131 471.5 316 77.5
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 3.5e-128 462.6 418 61.5
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 1.1e-126 457.6 321 72.0
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 6.2e-125 451.8 236 91.1
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 6.2e-125 451.8 236 91.1
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 2.4e-121 439.9 332 69.3
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.6e-120 437.2 415 58.1
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 5.6e-110 402.1 412 48.8
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 3.1e-92 343.2 242 76.0
MCO03G230 Micromonas commoda HOM05D005960 ORTHO05D007537 9.0e-76 288.5 318 46.5
MCO05G128 Micromonas commoda HOM05D005960 ORTHO05D007537 7.4e-62 242.3 337 41.8
PRCOL_00002980 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 1.9e-57 227.6 401 36.4
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 1.8e-52 211.1 344 37.5
PRCOL_00004151 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 2.7e-48 197.2 399 35.6
CDE07G0145 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 5.2e-47 193.0 117 81.2
MCO08G069 Micromonas commoda HOM05D005960 ORTHO05D007537 7.4e-46 189.1 349 33.5
Cc07_g03900 Coffea canephora HOM05D005960 ORTHO05D007537 1.8e-44 184.5 102 87.3
MCO08G121 Micromonas commoda HOM05D005960 ORTHO05D007537 1.7e-42 177.9 365 32.3
TPR.G22619 Trifolium pratense HOM05D005960 ORTHO05D007537 1.6e-40 171.4 153 60.8
AUR62018149 Chenopodium quinoa HOM05D005960 ORTHO05D007537 8.0e-40 169.1 100 83.0
Potri.004G125301 Populus trichocarpa HOM05D005960 ORTHO05D007537 1.2e-38 165.2 152 59.9
EL10Ac2g03064 Beta vulgaris HOM05D005960 ORTHO05D007537 1.3e-37 161.8 96 84.4
Oeu061493.1 Olea europaea HOM05D005960 ORTHO05D007537 5.4e-20 103.2 51 86.3
PGSC0003DMG400033541 Solanum tuberosum HOM05D005960 ORTHO05D007537 4.0e-15 87.0 62 77.4
Zm00001eb030310 Zea mays HOM05D005960 ORTHO05D051632 7.3e-09 66.2 38 86.8
MCO08G023 Micromonas commoda HOM05D005960 ORTHO05D270145 9.5e-09 65.9 160 27.5
Zm00001eb250570 Zea mays HOM05D005960 ORTHO05D051632 1.6e-08 65.1 42 78.6


User provided reference genes

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