Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G732.5 Capsicum annuum HOM05D002391 ORTHO05D004870 9.3e-212 740.0 377 100.0
CAN.G1209.27 Capsicum annuum HOM05D002391 ORTHO05D004870 6.7e-186 654.1 355 94.9
CAN.G585.49 Capsicum annuum HOM05D002391 ORTHO05D004870 6.7e-186 654.1 355 94.9
PGSC0003DMG401031089 Solanum tuberosum HOM05D002391 ORTHO05D004870 7.2e-180 634.0 355 91.3
Sopen07g029360 Solanum pennellii HOM05D002391 ORTHO05D004870 2.7e-179 632.1 355 91.0
Solyc07g056010.3 Solanum lycopersicum HOM05D002391 ORTHO05D004870 1.4e-178 629.8 355 90.7
Nitab4.5_0003682g0020 Nicotiana tabacum HOM05D002391 ORTHO05D004870 1.1e-177 626.7 355 90.1
Peaxi162Scf00028g00124 Petunia axillaris HOM05D002391 ORTHO05D004870 5.0e-173 611.3 355 89.3
Dinv31611 Davidia involucrata HOM05D002391 ORTHO05D004870 7.2e-164 580.9 355 83.9
Actinidia08007 Actinidia chinensis HOM05D002391 ORTHO05D004870 8.3e-160 567.4 356 82.0
Dinv32645 Davidia involucrata HOM05D002391 ORTHO05D004870 4.1e-159 565.1 355 82.3
Lsat_1_v5_gn_4_41841 Lactuca sativa HOM05D002391 ORTHO05D004870 4.1e-159 565.1 355 80.8
Migut.B01922 Erythranthe guttata HOM05D002391 ORTHO05D004870 2.0e-158 562.8 355 80.8
Hma1.2p1_0074F.1_g038740 Hydrangea macrophylla HOM05D002391 ORTHO05D004870 1.7e-157 559.7 359 80.2
Lj9A607T84 Lonicera japonica HOM05D002391 ORTHO05D004870 1.1e-156 557.0 355 80.0
Lsat_1_v5_gn_3_17681 Lactuca sativa HOM05D002391 ORTHO05D004870 2.5e-156 555.8 355 79.7
vmacro13188 Vaccinium macrocarpon HOM05D002391 ORTHO05D004870 8.0e-155 550.8 356 79.8
HanXRQChr16g0520851 Helianthus annuus HOM05D002391 ORTHO05D004870 1.8e-154 549.7 356 80.1
Cc06_g20470 Coffea canephora HOM05D002391 ORTHO05D004870 6.8e-154 547.7 357 78.7
MSTRG.17383 Avicennia marina HOM05D002391 ORTHO05D004870 8.9e-154 547.4 356 78.9
Nitab4.5_0003729g0040 Nicotiana tabacum HOM05D002391 ORTHO05D004870 3.4e-153 545.4 310 90.6
TAR629G2316 Trochodendron aralioides HOM05D002391 ORTHO05D004870 1.1e-151 540.4 356 78.1
SGA_v2.0_scaffold12G06269 Striga asiatica HOM05D002391 ORTHO05D004870 9.2e-151 537.3 355 76.9
GSVIVG01027440001 Vitis vinifera HOM05D002391 ORTHO05D004870 2.7e-150 535.8 355 76.3
Nn2g14439 Nelumbo nucifera HOM05D002391 ORTHO05D004870 3.9e-149 531.9 356 76.1
SalBow3G2598 Salvia bowleyana HOM05D002391 ORTHO05D004870 5.0e-149 531.6 380 73.4
SalBow3G4592 Salvia bowleyana HOM05D002391 ORTHO05D004870 5.0e-149 531.6 380 73.4
Aqoxy5G01515 Aquilegia oxysepala HOM05D002391 ORTHO05D004870 6.6e-149 531.2 356 77.2
MBI12_g09288_MAGBIO Magnolia biondii HOM05D002391 ORTHO05D004870 6.6e-149 531.2 356 75.3
Manes.01G239800 Manihot esculenta HOM05D002391 ORTHO05D004870 6.6e-149 531.2 356 77.2
arahy.Tifrunner.gnm1.ann1.E8X9SV Arachis hypogaea HOM05D002391 ORTHO05D004870 2.5e-148 529.3 363 75.8
Lj5g0026855 Lotus japonicus HOM05D002391 ORTHO05D004870 2.5e-148 529.3 357 76.8
arahy.Tifrunner.gnm1.ann1.SI3K9E Arachis hypogaea HOM05D002391 ORTHO05D004870 4.3e-148 528.5 363 75.5
Hund24710 Selenicereus undatus HOM05D002391 ORTHO05D004870 5.6e-148 528.1 360 75.8
DCAR_032252 Daucus carota HOM05D002391 ORTHO05D004870 1.2e-147 526.9 357 76.5
CsaV3_6G008330 Cucumis sativus L. HOM05D002391 ORTHO05D004870 1.6e-147 526.6 361 75.3
ECA234G3070 Erigeron canadensis HOM05D002391 ORTHO05D004870 1.6e-147 526.6 356 76.4
CANSAT56G4076 Cannabis sativa HOM05D002391 ORTHO05D004870 2.1e-147 526.2 358 76.0
ClCG06G002280 Citrullus lanatus HOM05D002391 ORTHO05D004870 3.6e-147 525.4 361 75.1
Lalb_Chr18g0044711 Lupinus albus HOM05D002391 ORTHO05D004870 3.6e-147 525.4 358 76.8
CANSAT56G4423 Cannabis sativa HOM05D002391 ORTHO05D004870 6.2e-147 524.6 357 75.9
TWI59G0940 Tripterygium wilfordii HOM05D002391 ORTHO05D004870 1.0e-146 523.9 356 75.8
MELO3C022305.2 Cucumis melo HOM05D002391 ORTHO05D004870 3.1e-146 522.3 361 74.2
Ciclev10018998m.g Citrus clementina HOM05D002391 ORTHO05D004870 5.2e-146 521.5 356 75.6
Eucgr.B02196 Eucalyptus grandis HOM05D002391 ORTHO05D004870 5.2e-146 521.5 356 75.3
Phvul.009G254600 Phaseolus vulgaris HOM05D002391 ORTHO05D004870 5.2e-146 521.5 357 75.6
CiPaw.01G082500 Carya illinoinensis HOM05D002391 ORTHO05D004870 6.8e-146 521.2 359 74.4
Haze_15735 Corylus avellana HOM05D002391 ORTHO05D004870 6.8e-146 521.2 360 73.6
COL.COLO4_31148 Corchorus olitorius HOM05D002391 ORTHO05D004870 8.9e-146 520.8 356 75.3
Glyma.03G261100 Glycine max HOM05D002391 ORTHO05D004870 1.5e-145 520.0 357 75.6
QL08p047248 Quercus lobata HOM05D002391 ORTHO05D004870 1.5e-145 520.0 357 74.5
VMungo1309G1994 Vigna mungo HOM05D002391 ORTHO05D004870 1.5e-145 520.0 357 75.6
Cfa003734 Carpinus fangiana HOM05D002391 ORTHO05D004870 2.0e-145 519.6 360 73.6
TWI14G1409 Tripterygium wilfordii HOM05D002391 ORTHO05D004870 2.6e-145 519.2 356 75.0
Phvul.009G257900 Phaseolus vulgaris HOM05D002391 ORTHO05D004870 3.4e-145 518.8 357 75.6
Atru.chr5.768 Acer truncatum HOM05D002391 ORTHO05D004870 4.4e-145 518.5 356 74.7
FAN01G3049 Fragaria x ananassa HOM05D002391 ORTHO05D004870 4.4e-145 518.5 360 73.6
Gorai.005G122300 Gossypium raimondii HOM05D002391 ORTHO05D004870 4.4e-145 518.5 357 74.2
PGR031G3302 Punica granatum HOM05D002391 ORTHO05D004870 5.8e-145 518.1 356 74.7
Thecc.06G056400 Theobroma cacao HOM05D002391 ORTHO05D004870 5.8e-145 518.1 357 74.2
VMungo1309G0406 Vigna mungo HOM05D002391 ORTHO05D004870 5.8e-145 518.1 357 75.4
FAN03G0415 Fragaria x ananassa HOM05D002391 ORTHO05D004870 9.8e-145 517.3 360 73.6
FAN10G4291 Fragaria x ananassa HOM05D002391 ORTHO05D004870 9.8e-145 517.3 360 73.6
Glyma.19G260100 Glycine max HOM05D002391 ORTHO05D004870 9.8e-145 517.3 357 75.1
Prupe.2G092100 Prunus persica HOM05D002391 ORTHO05D004870 9.8e-145 517.3 358 74.0
FvH4_7g17670 Fragaria vesca HOM05D002391 ORTHO05D004870 1.3e-144 516.9 360 73.3
Sed0000252 Sechium edule HOM05D002391 ORTHO05D004870 1.7e-144 516.5 361 74.2
Ca_09546_v3 Cicer arietinum L. HOM05D002391 ORTHO05D004870 2.2e-144 516.2 357 74.8
FAN06G0341 Fragaria x ananassa HOM05D002391 ORTHO05D004870 2.2e-144 516.2 360 73.3
FAN06G0379 Fragaria x ananassa HOM05D002391 ORTHO05D004870 2.2e-144 516.2 360 73.3
Potri.002G179600 Populus trichocarpa HOM05D002391 ORTHO05D004870 2.2e-144 516.2 358 76.0
Psat0s3525g0040 Pisum sativum HOM05D002391 ORTHO05D004870 3.7e-144 515.4 357 74.8
TPR.G4730 Trifolium pratense HOM05D002391 ORTHO05D004870 6.4e-144 514.6 357 74.5
FAN10G1672 Fragaria x ananassa HOM05D002391 ORTHO05D004870 8.3e-144 514.2 360 73.1
THA.LOC104815894 Tarenaya hassleriana HOM05D002391 ORTHO05D004870 8.3e-144 514.2 357 74.5
Medtr7g118220 Medicago truncatula HOM05D002391 ORTHO05D004870 1.9e-143 513.1 357 74.5
PSO017G7365 Papaver somniferum HOM05D002391 ORTHO05D004870 1.9e-143 513.1 356 73.3
Sc20g0005510 Simmondsia chinensis HOM05D002391 ORTHO05D004870 2.4e-143 512.7 356 73.0
Duzib235G0384 Durio zibethinus HOM05D002391 ORTHO05D004870 3.2e-143 512.3 357 73.4
Gohir.A02G090600 Gossypium hirsutum HOM05D002391 ORTHO05D004870 4.1e-143 511.9 357 73.7
PSO170G3053 Papaver somniferum HOM05D002391 ORTHO05D004870 4.1e-143 511.9 356 73.0
AUR62040015 Chenopodium quinoa HOM05D002391 ORTHO05D004870 1.2e-142 510.4 356 73.0
HPP92_001559 Vanilla planifolia HOM05D002391 ORTHO05D004870 2.0e-142 509.6 362 72.4
Sabra02G0134300 Salix brachista HOM05D002391 ORTHO05D004870 2.7e-142 509.2 358 75.1
Prupe.2G197800 Prunus persica HOM05D002391 ORTHO05D004870 4.6e-142 508.4 360 72.2
PSO339G3919 Papaver somniferum HOM05D002391 ORTHO05D004870 6.0e-142 508.1 356 72.8
Gohir.D06G121400 Gossypium hirsutum HOM05D002391 ORTHO05D004870 1.3e-141 506.9 357 72.5
Gorai.010G141700 Gossypium raimondii HOM05D002391 ORTHO05D004870 1.3e-141 506.9 357 72.5
Aa31LG5G1170 Aethionema arabicum HOM05D002391 ORTHO05D004870 2.3e-141 506.1 357 72.0
AUR62042494 Chenopodium quinoa HOM05D002391 ORTHO05D004870 3.9e-141 505.4 356 72.5
Ah.08g211620 Amaranthus hybridus HOM05D002391 ORTHO05D004870 5.0e-141 505.0 359 72.1
Thhalv10028369m.g Eutrema salsugineum HOM05D002391 ORTHO05D004870 5.0e-141 505.0 357 72.3
Sp6g01350 Schrenkiella parvula HOM05D002391 ORTHO05D004870 1.9e-140 503.1 357 72.3
A03p31630 Brassica napus HOM05D002391 ORTHO05D004870 2.1e-139 499.6 357 71.7
BraA03t12339Z Brassica rapa HOM05D002391 ORTHO05D004870 2.1e-139 499.6 357 71.7
BcaC01g06822 Brassica carinata HOM05D002391 ORTHO05D004870 2.8e-139 499.2 357 71.4
C03p38630 Brassica napus HOM05D002391 ORTHO05D004870 6.2e-139 498.0 357 71.4
BolC3t16136H Brassica oleracea HOM05D002391 ORTHO05D004870 6.2e-139 498.0 357 71.4
Carub.0006s3580 Capsella rubella HOM05D002391 ORTHO05D004870 1.8e-138 496.5 357 70.6
CDE11G0036 Ceratophyllum demersum HOM05D002391 ORTHO05D004870 3.1e-138 495.7 356 68.8
Gohir.A06G116700 Gossypium hirsutum HOM05D002391 ORTHO05D004870 5.8e-137 491.5 357 70.9
CARHR250280 Cardamine hirsuta HOM05D002391 ORTHO05D004870 1.3e-136 490.3 357 71.1
ECA234G2472 Erigeron canadensis HOM05D002391 ORTHO05D004870 1.3e-136 490.3 355 71.5
AL6G52005 Arabidopsis lyrata HOM05D002391 ORTHO05D004870 2.2e-136 489.6 357 70.0
MD07G1159800 Malus domestica HOM05D002391 ORTHO05D004870 2.2e-136 489.6 349 72.5
unitig_899.g15596 Utricularia gibba HOM05D002391 ORTHO05D004870 4.9e-136 488.4 355 71.0
Lalb_Chr15g0076531 Lupinus albus HOM05D002391 ORTHO05D004870 1.9e-135 486.5 357 70.9
ATR0697G195 Amborella trichopoda HOM05D002391 ORTHO05D004870 1.6e-134 483.4 356 68.5
AT4G01395 Arabidopsis thaliana HOM05D002391 ORTHO05D004870 6.0e-134 481.5 357 69.5
Oeu007915.2 Olea europaea HOM05D002391 ORTHO05D004870 8.6e-133 477.6 355 69.9
Gohir.D02G107800 Gossypium hirsutum HOM05D002391 ORTHO05D004870 8.9e-130 467.6 356 68.8
SEGI_23282 Sequoiadendron giganteum HOM05D002391 ORTHO05D004870 8.4e-128 461.1 359 63.8
SEGI_26155 Sequoiadendron giganteum HOM05D002391 ORTHO05D004870 2.7e-126 456.1 359 63.5
MD07G1159900 Malus domestica HOM05D002391 ORTHO05D004870 2.3e-125 453.0 328 71.3
EL10Ac7g16621 Beta vulgaris HOM05D002391 ORTHO05D004870 5.1e-125 451.8 353 66.6
BcaB05g23972 Brassica carinata HOM05D002391 ORTHO05D004870 1.9e-124 449.9 353 66.6
unitig_21.g20038 Utricularia gibba HOM05D002391 ORTHO05D004870 1.4e-122 443.7 355 65.6
Os02g0456000 Oryza sativa ssp. japonica HOM05D002391 ORTHO05D004870 3.4e-121 439.1 356 63.5
Rhsim07G0007000 Rhododendron simsii HOM05D002391 ORTHO05D004870 7.8e-118 427.9 347 66.6
Zm00001eb402340 Zea mays HOM05D002391 ORTHO05D004870 3.9e-117 425.6 366 60.9
A03p50140 Brassica napus HOM05D002391 ORTHO05D004870 4.8e-115 418.7 321 67.6
Zm00001eb005370 Zea mays HOM05D002391 ORTHO05D004870 1.2e-105 387.5 330 60.3
Mapoly0151s0016 Marchantia polymorpha HOM05D002391 ORTHO05D004870 2.5e-100 369.8 356 52.5
Pp3c17_20140 Physcomitrium patens HOM05D002391 ORTHO05D004870 3.7e-99 365.9 365 52.1
AagrBONN_evm.TU.Sc2ySwM_344.5215 Anthoceros agrestis HOM05D002391 ORTHO05D004870 2.4e-98 363.2 352 53.7
BraA03t14107Z Brassica rapa HOM05D002391 ORTHO05D004870 2.4e-98 363.2 274 69.0
Manes.05G016350 Manihot esculenta HOM05D002391 ORTHO05D004870 2.4e-98 363.2 356 59.6
SMO364G0412 Selaginella moellendorffii HOM05D002391 ORTHO05D004870 5.8e-97 358.6 367 51.8
A05p28430 Brassica napus HOM05D002391 ORTHO05D004870 2.9e-96 356.3 270 69.6
BraA05t21723Z Brassica rapa HOM05D002391 ORTHO05D004870 2.9e-96 356.3 270 69.6
RcHm_v2.0_Chr1g0334511 Rosa chinensis HOM05D002391 ORTHO05D004870 1.3e-91 340.9 233 76.0
Carub.0003s2971 Capsella rubella HOM05D002391 ORTHO05D004870 8.5e-88 328.2 363 51.0
A08p28600 Brassica napus HOM05D002391 ORTHO05D004870 2.7e-86 323.2 235 71.1
BraA02t04916Z Brassica rapa HOM05D002391 ORTHO05D004870 3.0e-85 319.7 232 71.1
BraA02t08770Z Brassica rapa HOM05D002391 ORTHO05D004870 3.0e-85 319.7 232 71.1
PSO302G0149 Papaver somniferum HOM05D002391 ORTHO05D004870 2.0e-81 307.0 229 70.3
A07p33310 Brassica napus HOM05D002391 ORTHO05D004870 1.4e-79 300.8 211 73.9
TAR636G0053 Trochodendron aralioides HOM05D002391 ORTHO05D004870 1.0e-77 294.7 184 83.2
CBR_g6290 Chara braunii HOM05D002391 ORTHO05D004870 1.8e-77 293.9 408 40.9
vmacro13197 Vaccinium macrocarpon HOM05D002391 ORTHO05D004870 2.7e-70 270.0 303 53.5
PRCOL_00002903 Prasinoderma coloniale HOM05D002391 ORTHO05D004870 1.5e-55 221.1 371 36.1
MD07G1159700 Malus domestica HOM05D002391 ORTHO05D004870 2.7e-49 200.3 129 80.6
TAR636G3264 Trochodendron aralioides HOM05D002391 ORTHO05D004870 1.0e-45 188.3 137 67.9
Cre06.g287250 Chlamydomonas reinhardtii HOM05D002391 ORTHO05D004870 5.2e-45 186.0 426 29.8
Actinidia33035 Actinidia chinensis HOM05D002391 ORTHO05D004870 6.8e-45 185.7 120 83.3
MBI12_g48127_MAGBIO Magnolia biondii HOM05D002391 ORTHO05D004870 4.9e-43 179.5 182 54.4
DCAR_022118 Daucus carota HOM05D002391 ORTHO05D004870 2.2e-35 154.1 120 64.2
BcaC01g02750 Brassica carinata HOM05D002391 ORTHO05D004870 2.0e-28 131.0 142 58.5
RcHm_v2.0_Chr1g0334501 Rosa chinensis HOM05D002391 ORTHO05D004870 1.3e-27 128.3 105 61.0
vmacro23330 Vaccinium macrocarpon HOM05D002391 ORTHO05D004870 1.3e-27 128.3 127 59.8
MBI12_g48128_MAGBIO Magnolia biondii HOM05D002391 ORTHO05D004870 8.3e-27 125.6 78 83.3
FvH4_5g29942 Fragaria vesca HOM05D002391 ORTHO05D017667 4.7e-22 109.8 87 62.1
C03p60940 Brassica napus HOM05D002391 ORTHO05D004870 8.3e-19 99.0 80 70.0
BolC3t18356H Brassica oleracea HOM05D002391 ORTHO05D004870 8.3e-19 99.0 80 70.0
BolC2t09861H Brassica oleracea HOM05D002391 ORTHO05D017667 1.1e-18 98.6 85 56.5
TPR.G25208 Trifolium pratense HOM05D002391 ORTHO05D004870 5.4e-18 96.3 95 60.0
C02p38430 Brassica napus HOM05D002391 ORTHO05D017667 1.2e-17 95.1 85 54.1
QL11p025959 Quercus lobata HOM05D002391 ORTHO05D004870 1.7e-16 91.3 261 33.7
Cfa025151 Carpinus fangiana HOM05D002391 ORTHO05D004870 3.1e-13 80.5 380 19.7
FAN18G2005 Fragaria x ananassa HOM05D002391 ORTHO05D017667 6.8e-13 79.3 61 60.7
BcaC03g16083 Brassica carinata HOM05D002391 ORTHO05D017667 7.6e-12 75.9 74 48.6
CDE02G1610 Ceratophyllum demersum HOM05D002391 ORTHO05D004870 1.9e-10 71.2 50 62.0
FAN19G0487 Fragaria x ananassa HOM05D002391 ORTHO05D017667 4.3e-07 60.1 45 62.2
C09p52400 Brassica napus HOM05D000073 ORTHO05D017582 2.1e-06 57.8 54 55.6
BolC1t04175H Brassica oleracea HOM05D000073 ORTHO05D017582 2.1e-06 57.8 54 55.6
BolC9t58109H Brassica oleracea HOM05D000073 ORTHO05D017582 2.1e-06 57.8 54 55.6
C09p10850 Brassica napus HOM05D000073 ORTHO05D017582 6.2e-06 56.2 54 53.7


User provided reference genes

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