Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G730.21 Capsicum annuum HOM05D005972 ORTHO05D007548 3.5e-36 154.5 79 100.0
CAN.G730.4 Capsicum annuum HOM05D005972 ORTHO05D007548 8.1e-17 90.1 47 97.9
CAN.G1513.3 Capsicum annuum HOM05D005972 ORTHO05D007548 1.4e-16 89.4 68 72.1
Nitab4.5_0012898g0010 Nicotiana tabacum HOM05D005972 ORTHO05D007548 9.0e-16 86.7 52 84.6
CAN.G730.12 Capsicum annuum HOM05D005972 ORTHO05D007548 3.4e-15 84.7 53 84.9
Peaxi162Scf00152g01221 Petunia axillaris HOM05D005972 ORTHO05D007548 3.4e-15 84.7 52 82.7
CSS0039579 Camellia sinensis var. sinensis HOM05D005972 ORTHO05D007548 9.9e-15 83.2 54 79.6
CiPaw.11G025800 Carya illinoinensis HOM05D005972 ORTHO05D007548 1.3e-14 82.8 57 73.7
vmacro19910 Vaccinium macrocarpon HOM05D005972 ORTHO05D007548 1.3e-14 82.8 52 78.8
GSVIVG01020853001 Vitis vinifera HOM05D005972 ORTHO05D007548 1.3e-14 82.8 48 85.4
Nitab4.5_0000718g0290 Nicotiana tabacum HOM05D005972 ORTHO05D007548 1.7e-14 82.4 52 80.8
Cfa019136 Carpinus fangiana HOM05D005972 ORTHO05D007548 2.2e-14 82.0 52 80.8
Dinv24228 Davidia involucrata HOM05D001691 ORTHO05D007548 2.2e-14 82.0 54 77.8
Gohir.A06G170300 Gossypium hirsutum HOM05D005972 ORTHO05D007548 2.9e-14 81.6 52 78.8
Haze_07503 Corylus avellana HOM05D005972 ORTHO05D007548 3.8e-14 81.3 52 80.8
Thecc.04G023500 Theobroma cacao HOM05D005972 ORTHO05D007548 3.8e-14 81.3 52 78.8
Actinidia28072 Actinidia chinensis HOM05D005972 ORTHO05D007548 4.9e-14 80.9 70 65.7
CAN.G730.17 Capsicum annuum HOM05D005972 ORTHO05D007548 4.9e-14 80.9 45 93.3
Thecc.10G118600 Theobroma cacao HOM05D005972 ORTHO05D007548 4.9e-14 80.9 52 78.8
COL.COLO4_27930 Corchorus olitorius HOM05D005972 ORTHO05D007548 6.4e-14 80.5 52 78.8
QL04p050517 Quercus lobata HOM05D005972 ORTHO05D007548 6.4e-14 80.5 53 75.5
Solyc11g007070.2 Solanum lycopersicum HOM05D005972 ORTHO05D007548 8.4e-14 80.1 52 80.8
Sopen11g002990 Solanum pennellii HOM05D005972 ORTHO05D007548 8.4e-14 80.1 52 80.8
Cc02_g21900 Coffea canephora HOM05D005972 ORTHO05D007548 1.1e-13 79.7 52 76.9
Gorai.N007100 Gossypium raimondii HOM05D005972 ORTHO05D007548 1.1e-13 79.7 52 78.8
HanXRQChr11g0337671 Helianthus annuus HOM05D005972 ORTHO05D007548 1.1e-13 79.7 51 78.4
Lsat_1_v5_gn_7_80540 Lactuca sativa HOM05D005972 ORTHO05D007548 1.1e-13 79.7 51 78.4
ECA236G4176 Erigeron canadensis HOM05D005972 ORTHO05D007548 1.4e-13 79.3 51 78.4
Atru.chr12.548 Acer truncatum HOM05D005972 ORTHO05D007548 1.9e-13 79.0 52 73.1
COL.COLO4_10011 Corchorus olitorius HOM05D005972 ORTHO05D007548 1.9e-13 79.0 52 76.9
Sed0010539 Sechium edule HOM05D005972 ORTHO05D007548 1.9e-13 79.0 60 68.3
Lj9A317T77 Lonicera japonica HOM05D005972 ORTHO05D007548 3.2e-13 78.2 51 78.4
Manes.16G061300 Manihot esculenta HOM05D005972 ORTHO05D007548 3.2e-13 78.2 52 75.0
Gohir.D06G178100 Gossypium hirsutum HOM05D005972 ORTHO05D007548 4.2e-13 77.8 52 76.9
Lalb_Chr12g0208521 Lupinus albus HOM05D005972 ORTHO05D007548 4.2e-13 77.8 52 75.0
Cpa.g.sc36.20 Carica papaya HOM05D005972 ORTHO05D007548 5.4e-13 77.4 52 75.0
Medtr4g094305 Medicago truncatula HOM05D005972 ORTHO05D007548 5.4e-13 77.4 52 75.0
Oeu017286.1 Olea europaea HOM05D005972 ORTHO05D007548 7.1e-13 77.0 46 82.6
Rhsim05G0111400 Rhododendron simsii HOM05D005972 ORTHO05D007548 1.2e-12 76.3 52 75.0
Ca_18332_v3 Cicer arietinum L. HOM05D005972 ORTHO05D007548 1.6e-12 75.9 52 75.0
PGR142G0064 Punica granatum HOM05D005972 ORTHO05D007548 1.6e-12 75.9 52 75.0
ClCG05G021510 Citrullus lanatus HOM05D005972 ORTHO05D007548 2.1e-12 75.5 52 73.1
MD13G1062400 Malus domestica HOM05D005972 ORTHO05D007548 2.1e-12 75.5 52 71.2
TPR.G31487 Trifolium pratense HOM05D005972 ORTHO05D007548 2.1e-12 75.5 52 73.1
MELO3C012375.2 Cucumis melo HOM05D005972 ORTHO05D007548 2.7e-12 75.1 52 75.0
Psat0s2194g0120 Pisum sativum HOM05D005972 ORTHO05D007548 2.7e-12 75.1 52 75.0
Lj4g0025997 Lotus japonicus HOM05D005972 ORTHO05D007548 3.5e-12 74.7 52 73.1
Potri.001G222400 Populus trichocarpa HOM05D005972 ORTHO05D007548 3.5e-12 74.7 53 73.6
A05p16900 Brassica napus HOM05D005972 ORTHO05D007548 4.6e-12 74.3 60 58.3
Eucgr.H00021 Eucalyptus grandis HOM05D005972 ORTHO05D007548 4.6e-12 74.3 51 72.5
TWI73G1071 Tripterygium wilfordii HOM05D005972 ORTHO05D007548 6.0e-12 73.9 52 73.1
BcaNung00313 Brassica carinata HOM05D005972 ORTHO05D007548 7.9e-12 73.6 45 73.3
C06p16620 Brassica napus HOM05D005972 ORTHO05D007548 7.9e-12 73.6 47 70.2
BolC6t36864H Brassica oleracea HOM05D005972 ORTHO05D007548 7.9e-12 73.6 47 70.2
DCAR_006139 Daucus carota HOM05D005972 ORTHO05D007548 7.9e-12 73.6 47 76.6
CsaV3_5G035730 Cucumis sativus L. HOM05D005972 ORTHO05D007548 1.0e-11 73.2 52 71.2
Prupe.1G287600 Prunus persica HOM05D005972 ORTHO05D007548 1.0e-11 73.2 46 80.4
RcHm_v2.0_Chr4g0438261 Rosa chinensis HOM05D005972 ORTHO05D007548 1.0e-11 73.2 68 57.4
MSTRG.27825 Avicennia marina HOM05D005972 ORTHO05D007548 1.3e-11 72.8 50 72.0
BcaC09g50180 Brassica carinata HOM05D005972 ORTHO05D007548 1.3e-11 72.8 45 73.3
A01p22560 Brassica napus HOM05D005972 ORTHO05D007548 1.3e-11 72.8 45 73.3
BolC1t02740H Brassica oleracea HOM05D005972 ORTHO05D007548 1.3e-11 72.8 45 73.3
BraA01t02169Z Brassica rapa HOM05D005972 ORTHO05D007548 1.3e-11 72.8 45 73.3
BcaC08g44257 Brassica carinata HOM05D005972 ORTHO05D024007 1.8e-11 72.4 45 71.1
BraA05t20595Z Brassica rapa HOM05D005972 ORTHO05D007548 1.8e-11 72.4 45 71.1
FvH4_4g29980 Fragaria vesca HOM05D005972 ORTHO05D007548 1.8e-11 72.4 52 69.2
FAN07G1127 Fragaria x ananassa HOM05D005972 ORTHO05D007548 1.8e-11 72.4 52 69.2
FAN12G3642 Fragaria x ananassa HOM05D005972 ORTHO05D007548 1.8e-11 72.4 52 69.2
FAN22G0246 Fragaria x ananassa HOM05D005972 ORTHO05D007548 1.8e-11 72.4 52 69.2
SpUn0490_0010 Schrenkiella parvula HOM05D005972 ORTHO05D007548 1.8e-11 72.4 45 71.1
VMungo0251G2526 Vigna mungo HOM05D005972 ORTHO05D007548 1.8e-11 72.4 46 78.3
EL10Ac5g12767 Beta vulgaris HOM05D005972 ORTHO05D007548 2.3e-11 72.0 50 66.0
CDE04G1870 Ceratophyllum demersum HOM05D005972 ORTHO05D007548 2.3e-11 72.0 52 67.3
Migut.N01012 Erythranthe guttata HOM05D005972 ORTHO05D007548 2.3e-11 72.0 52 69.2
SGA_v2.0_scaffold145G36053 Striga asiatica HOM05D005972 ORTHO05D007548 2.3e-11 72.0 52 71.2
ATR0174G007 Amborella trichopoda HOM05D005972 ORTHO05D007548 3.0e-11 71.6 54 66.7
AL7G40820 Arabidopsis lyrata HOM05D005972 ORTHO05D007548 3.0e-11 71.6 45 68.9
Ciclev10031864m.g Citrus clementina HOM05D005972 ORTHO05D007548 3.0e-11 71.6 52 71.2
Duzib106G0263 Durio zibethinus HOM05D005972 ORTHO05D007548 3.0e-11 71.6 49 75.5
FAN17G2742 Fragaria x ananassa HOM05D005972 ORTHO05D007548 3.0e-11 71.6 46 76.1
arahy.Tifrunner.gnm1.ann1.41EE5L Arachis hypogaea HOM05D005972 ORTHO05D007548 3.9e-11 71.2 52 69.2
arahy.Tifrunner.gnm1.ann1.UKM804 Arachis hypogaea HOM05D005972 ORTHO05D007548 3.9e-11 71.2 52 69.2
C01p28060 Brassica napus HOM05D005972 ORTHO05D007548 3.9e-11 71.2 45 71.1
CARHR221700 Cardamine hirsuta HOM05D005972 ORTHO05D007548 3.9e-11 71.2 45 68.9
Ah.12g057320 Amaranthus hybridus HOM05D005972 ORTHO05D007548 5.1e-11 70.9 51 66.7
AT4G15010 Arabidopsis thaliana HOM05D005972 ORTHO05D007548 6.7e-11 70.5 45 71.1
Glyma.05G120600 Glycine max HOM05D005972 ORTHO05D007548 6.7e-11 70.5 52 69.2
SalBow6G6672 Salvia bowleyana HOM05D005972 ORTHO05D007548 6.7e-11 70.5 67 59.7
Aa31LG9G2330 Aethionema arabicum HOM05D005972 ORTHO05D007548 8.7e-11 70.1 45 71.1
BcaB02g07844 Brassica carinata HOM05D005972 ORTHO05D007548 8.7e-11 70.1 45 71.1
Carub.0007s2708 Capsella rubella HOM05D005972 ORTHO05D007548 8.7e-11 70.1 45 71.1
MD16G1060700 Malus domestica HOM05D005972 ORTHO05D007548 8.7e-11 70.1 46 76.1
Phvul.002G206200 Phaseolus vulgaris HOM05D005972 ORTHO05D007548 8.7e-11 70.1 52 67.3
Thhalv10025456m.g Eutrema salsugineum HOM05D005972 ORTHO05D007548 1.5e-10 69.3 45 71.1
THA.LOC104808523 Tarenaya hassleriana HOM05D005972 ORTHO05D007548 1.5e-10 69.3 45 71.1
Sc22g0000350 Simmondsia chinensis HOM05D005972 ORTHO05D007548 1.9e-10 68.9 51 64.7
ATR0594G009 Amborella trichopoda HOM05D005972 ORTHO05D007548 2.5e-10 68.6 52 65.4
Glyma.08G075400 Glycine max HOM05D005972 ORTHO05D007548 2.5e-10 68.6 52 67.3
PSO782G4197 Papaver somniferum HOM05D005972 ORTHO05D007548 2.5e-10 68.6 46 73.9
Aqoxy4G02449 Aquilegia oxysepala HOM05D005972 ORTHO05D007548 3.3e-10 68.2 49 69.4
HPP92_021056 Vanilla planifolia HOM05D005972 ORTHO05D007548 3.3e-10 68.2 52 65.4
arahy.Tifrunner.gnm1.ann1.L3LYUI Arachis hypogaea HOM05D005383 ORTHO05D031493 7.4e-10 67.0 51 62.7
MBI03_g03956_MAGBIO Magnolia biondii HOM05D005972 ORTHO05D007548 9.6e-10 66.6 45 73.3
Nn6g35524 Nelumbo nucifera HOM05D005972 ORTHO05D007548 9.6e-10 66.6 52 63.5
Os04g0527500 Oryza sativa ssp. japonica HOM05D005972 ORTHO05D007548 1.6e-09 65.9 49 67.3
PSO063G2120 Papaver somniferum HOM05D005972 ORTHO05D007548 2.8e-09 65.1 46 71.7
CANSAT80G0182 Cannabis sativa HOM05D005972 ORTHO05D007548 3.7e-09 64.7 50 72.0
Zm00001eb427070 Zea mays HOM05D005972 ORTHO05D007548 2.4e-08 62.0 52 59.6
arahy.Tifrunner.gnm1.ann1.YJH68W Arachis hypogaea HOM05D005972 ORTHO05D083016 3.1e-08 61.6 45 66.7
SHI11404 Sapria himalayana HOM05D005972 ORTHO05D007548 6.9e-08 60.5 52 63.5
arahy.Tifrunner.gnm1.ann1.03MD5J Arachis hypogaea HOM05D000575 ORTHO05D011349 2.0e-07 58.9 45 64.4
arahy.Tifrunner.gnm1.ann1.9A5XZY Arachis hypogaea HOM05D005972 ORTHO05D031493 9.9e-07 56.6 49 61.2
SEGI_29488 Sequoiadendron giganteum HOM05D005972 ORTHO05D007548 1.7e-06 55.8 51 54.9


User provided reference genes

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