Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G730.17 Capsicum annuum HOM05D005972 ORTHO05D007548 1.6e-55 219.2 111 100.0
CAN.G730.4 Capsicum annuum HOM05D005972 ORTHO05D007548 8.7e-41 170.2 94 92.6
CAN.G1513.3 Capsicum annuum HOM05D005972 ORTHO05D007548 4.5e-37 157.9 110 78.2
Nitab4.5_0012898g0010 Nicotiana tabacum HOM05D005972 ORTHO05D007548 3.5e-34 148.3 110 71.8
Peaxi162Scf00152g01221 Petunia axillaris HOM05D005972 ORTHO05D007548 1.0e-33 146.7 110 70.0
Solyc11g007070.2 Solanum lycopersicum HOM05D005972 ORTHO05D007548 5.1e-33 144.4 109 71.6
Sopen11g002990 Solanum pennellii HOM05D005972 ORTHO05D007548 5.1e-33 144.4 109 71.6
Nitab4.5_0000718g0290 Nicotiana tabacum HOM05D005972 ORTHO05D007548 6.7e-33 144.1 110 70.0
Lsat_1_v5_gn_7_80540 Lactuca sativa HOM05D005972 ORTHO05D007548 1.2e-29 133.3 110 64.5
CSS0039579 Camellia sinensis var. sinensis HOM05D005972 ORTHO05D007548 1.5e-29 132.9 110 65.5
ECA236G4176 Erigeron canadensis HOM05D005972 ORTHO05D007548 2.0e-29 132.5 108 64.8
TPR.G31487 Trifolium pratense HOM05D005972 ORTHO05D007548 7.6e-29 130.6 107 62.6
Cc02_g21900 Coffea canephora HOM05D005972 ORTHO05D007548 1.3e-28 129.8 110 64.5
Gohir.A06G170300 Gossypium hirsutum HOM05D005972 ORTHO05D007548 1.3e-28 129.8 107 65.4
Psat0s2194g0120 Pisum sativum HOM05D005972 ORTHO05D007548 1.7e-28 129.4 107 63.6
Atru.chr12.548 Acer truncatum HOM05D005972 ORTHO05D007548 2.2e-28 129.0 110 60.9
Gorai.N007100 Gossypium raimondii HOM05D005972 ORTHO05D007548 2.2e-28 129.0 107 65.4
Medtr4g094305 Medicago truncatula HOM05D005972 ORTHO05D007548 2.2e-28 129.0 107 62.6
HanXRQChr11g0337671 Helianthus annuus HOM05D005972 ORTHO05D007548 3.8e-28 128.3 110 62.7
Potri.001G222400 Populus trichocarpa HOM05D005972 ORTHO05D007548 4.9e-28 127.9 109 63.3
MD13G1062400 Malus domestica HOM05D005972 ORTHO05D007548 6.4e-28 127.5 110 60.9
Gohir.D06G178100 Gossypium hirsutum HOM05D005972 ORTHO05D007548 8.4e-28 127.1 107 64.5
vmacro19910 Vaccinium macrocarpon HOM05D005972 ORTHO05D007548 8.4e-28 127.1 109 63.3
Lj9A317T77 Lonicera japonica HOM05D005972 ORTHO05D007548 1.1e-27 126.7 107 64.5
Lalb_Chr12g0208521 Lupinus albus HOM05D005972 ORTHO05D007548 1.1e-27 126.7 108 60.2
Cfa019136 Carpinus fangiana HOM05D005972 ORTHO05D007548 1.4e-27 126.3 107 62.6
Ca_18332_v3 Cicer arietinum L. HOM05D005972 ORTHO05D007548 1.4e-27 126.3 107 60.7
FvH4_4g29980 Fragaria vesca HOM05D005972 ORTHO05D007548 1.4e-27 126.3 109 61.5
FAN07G1127 Fragaria x ananassa HOM05D005972 ORTHO05D007548 1.4e-27 126.3 109 61.5
FAN12G3642 Fragaria x ananassa HOM05D005972 ORTHO05D007548 1.4e-27 126.3 109 61.5
FAN22G0246 Fragaria x ananassa HOM05D005972 ORTHO05D007548 1.4e-27 126.3 109 61.5
Oeu017286.1 Olea europaea HOM05D005972 ORTHO05D007548 1.4e-27 126.3 107 62.6
RcHm_v2.0_Chr4g0438261 Rosa chinensis HOM05D005972 ORTHO05D007548 1.4e-27 126.3 109 61.5
BcaC09g50180 Brassica carinata HOM05D005972 ORTHO05D007548 1.9e-27 125.9 110 55.5
BolC1t02740H Brassica oleracea HOM05D005972 ORTHO05D007548 1.9e-27 125.9 110 55.5
BraA01t02169Z Brassica rapa HOM05D005972 ORTHO05D007548 1.9e-27 125.9 110 55.5
Eucgr.H00021 Eucalyptus grandis HOM05D005972 ORTHO05D007548 1.9e-27 125.9 113 58.4
Lj4g0025997 Lotus japonicus HOM05D005972 ORTHO05D007548 1.9e-27 125.9 107 61.7
Haze_07503 Corylus avellana HOM05D005972 ORTHO05D007548 2.4e-27 125.6 107 62.6
SpUn0490_0010 Schrenkiella parvula HOM05D005972 ORTHO05D007548 2.4e-27 125.6 110 55.5
A01p22560 Brassica napus HOM05D005972 ORTHO05D007548 3.2e-27 125.2 110 55.5
CARHR221700 Cardamine hirsuta HOM05D005972 ORTHO05D007548 3.2e-27 125.2 110 54.5
FAN17G2742 Fragaria x ananassa HOM05D005972 ORTHO05D007548 3.2e-27 125.2 109 60.6
Prupe.1G287600 Prunus persica HOM05D005972 ORTHO05D007548 3.2e-27 125.2 105 62.9
Aa31LG9G2330 Aethionema arabicum HOM05D005972 ORTHO05D007548 4.2e-27 124.8 110 56.4
CiPaw.11G025800 Carya illinoinensis HOM05D005972 ORTHO05D007548 4.2e-27 124.8 107 61.7
C01p28060 Brassica napus HOM05D005972 ORTHO05D007548 5.5e-27 124.4 110 54.5
Thhalv10025456m.g Eutrema salsugineum HOM05D005972 ORTHO05D007548 5.5e-27 124.4 110 56.4
AT4G15010 Arabidopsis thaliana HOM05D005972 ORTHO05D007548 7.1e-27 124.0 110 55.5
Thecc.04G023500 Theobroma cacao HOM05D005972 ORTHO05D007548 7.1e-27 124.0 107 61.7
QL04p050517 Quercus lobata HOM05D005972 ORTHO05D007548 1.2e-26 123.2 107 60.7
AL7G40820 Arabidopsis lyrata HOM05D005972 ORTHO05D007548 2.7e-26 122.1 110 53.6
COL.COLO4_27930 Corchorus olitorius HOM05D005972 ORTHO05D007548 2.7e-26 122.1 107 60.7
BcaNung00313 Brassica carinata HOM05D005972 ORTHO05D007548 3.5e-26 121.7 110 54.5
Actinidia28072 Actinidia chinensis HOM05D005972 ORTHO05D007548 4.6e-26 121.3 106 61.3
Thecc.10G118600 Theobroma cacao HOM05D005972 ORTHO05D007548 4.6e-26 121.3 107 61.7
TWI73G1071 Tripterygium wilfordii HOM05D005972 ORTHO05D007548 4.6e-26 121.3 109 58.7
Glyma.05G120600 Glycine max HOM05D005972 ORTHO05D007548 6.0e-26 120.9 107 58.9
EL10Ac5g12767 Beta vulgaris HOM05D005972 ORTHO05D007548 7.9e-26 120.6 108 54.6
Carub.0007s2708 Capsella rubella HOM05D005972 ORTHO05D007548 7.9e-26 120.6 110 53.6
Cpa.g.sc36.20 Carica papaya HOM05D005972 ORTHO05D007548 7.9e-26 120.6 108 58.3
arahy.Tifrunner.gnm1.ann1.41EE5L Arachis hypogaea HOM05D005972 ORTHO05D007548 1.0e-25 120.2 108 58.3
arahy.Tifrunner.gnm1.ann1.UKM804 Arachis hypogaea HOM05D005972 ORTHO05D007548 1.0e-25 120.2 108 58.3
BcaB02g07844 Brassica carinata HOM05D005972 ORTHO05D007548 1.3e-25 119.8 110 54.5
COL.COLO4_10011 Corchorus olitorius HOM05D005972 ORTHO05D007548 1.3e-25 119.8 107 59.8
Manes.16G061300 Manihot esculenta HOM05D005972 ORTHO05D007548 1.3e-25 119.8 110 58.2
PGR142G0064 Punica granatum HOM05D005972 ORTHO05D007548 1.3e-25 119.8 108 60.2
CAN.G730.12 Capsicum annuum HOM05D005972 ORTHO05D007548 1.8e-25 119.4 62 98.4
Ciclev10031864m.g Citrus clementina HOM05D005972 ORTHO05D007548 1.8e-25 119.4 113 59.3
GSVIVG01020853001 Vitis vinifera HOM05D005972 ORTHO05D007548 1.8e-25 119.4 106 58.5
Sed0010539 Sechium edule HOM05D005972 ORTHO05D007548 3.9e-25 118.2 107 57.9
Glyma.08G075400 Glycine max HOM05D005972 ORTHO05D007548 5.1e-25 117.9 105 58.1
CANSAT80G0182 Cannabis sativa HOM05D005972 ORTHO05D007548 6.7e-25 117.5 107 58.9
Phvul.002G206200 Phaseolus vulgaris HOM05D005972 ORTHO05D007548 8.7e-25 117.1 107 57.0
Rhsim05G0111400 Rhododendron simsii HOM05D005972 ORTHO05D007548 8.7e-25 117.1 105 61.0
SalBow6G6672 Salvia bowleyana HOM05D005972 ORTHO05D007548 1.1e-24 116.7 106 57.5
ClCG05G021510 Citrullus lanatus HOM05D005972 ORTHO05D007548 1.9e-24 115.9 107 57.9
Migut.N01012 Erythranthe guttata HOM05D005972 ORTHO05D007548 1.9e-24 115.9 109 56.9
MSTRG.27825 Avicennia marina HOM05D005972 ORTHO05D007548 5.6e-24 114.4 106 57.5
Duzib106G0263 Durio zibethinus HOM05D005972 ORTHO05D007548 5.6e-24 114.4 104 61.5
SGA_v2.0_scaffold145G36053 Striga asiatica HOM05D005972 ORTHO05D007548 5.6e-24 114.4 109 56.0
VMungo0251G2526 Vigna mungo HOM05D005972 ORTHO05D007548 7.4e-24 114.0 130 49.2
Ah.12g057320 Amaranthus hybridus HOM05D005972 ORTHO05D007548 9.6e-24 113.6 108 54.6
Aqoxy4G02449 Aquilegia oxysepala HOM05D005972 ORTHO05D007548 9.6e-24 113.6 104 56.7
THA.LOC104808523 Tarenaya hassleriana HOM05D005972 ORTHO05D007548 9.6e-24 113.6 107 54.2
Dinv24228 Davidia involucrata HOM05D001691 ORTHO05D007548 1.3e-23 113.2 92 66.3
MELO3C012375.2 Cucumis melo HOM05D005972 ORTHO05D007548 2.8e-23 112.1 107 57.9
PSO782G4197 Papaver somniferum HOM05D005972 ORTHO05D007548 6.2e-23 110.9 104 57.7
BraA05t20595Z Brassica rapa HOM05D005972 ORTHO05D007548 8.2e-23 110.5 97 55.7
Sc22g0000350 Simmondsia chinensis HOM05D005972 ORTHO05D007548 8.2e-23 110.5 111 54.1
MD16G1060700 Malus domestica HOM05D005972 ORTHO05D007548 1.1e-22 110.2 107 57.0
CsaV3_5G035730 Cucumis sativus L. HOM05D005972 ORTHO05D007548 3.1e-22 108.6 107 55.1
Os04g0527500 Oryza sativa ssp. japonica HOM05D005972 ORTHO05D007548 5.3e-22 107.8 118 53.4
PSO063G2120 Papaver somniferum HOM05D005972 ORTHO05D007548 6.9e-22 107.5 104 56.7
Nn6g35524 Nelumbo nucifera HOM05D005972 ORTHO05D007548 4.5e-21 104.8 110 50.9
MBI03_g03956_MAGBIO Magnolia biondii HOM05D005972 ORTHO05D007548 7.6e-21 104.0 106 53.8
Zm00001eb427070 Zea mays HOM05D005972 ORTHO05D007548 1.7e-20 102.8 104 53.8
HPP92_021056 Vanilla planifolia HOM05D005972 ORTHO05D007548 2.2e-20 102.4 107 52.3
C06p16620 Brassica napus HOM05D005972 ORTHO05D007548 3.8e-20 101.7 110 50.0
BolC6t36864H Brassica oleracea HOM05D005972 ORTHO05D007548 3.8e-20 101.7 110 50.0
CDE04G1870 Ceratophyllum demersum HOM05D005972 ORTHO05D007548 6.5e-20 100.9 108 50.9
Sp7g13170 Schrenkiella parvula HOM05D005972 ORTHO05D007548 2.5e-19 99.0 92 52.2
A05p16900 Brassica napus HOM05D005972 ORTHO05D007548 1.6e-18 96.3 99 50.5
ATR0174G007 Amborella trichopoda HOM05D005972 ORTHO05D007548 2.1e-18 95.9 107 50.5
SHI11404 Sapria himalayana HOM05D005972 ORTHO05D007548 3.5e-18 95.1 103 53.4
ATR0594G009 Amborella trichopoda HOM05D005972 ORTHO05D007548 6.7e-17 90.9 106 49.1
CAN.G1940.2 Capsicum annuum HOM05D005972 ORTHO05D007548 1.9e-16 89.4 50 86.0
SEGI_29488 Sequoiadendron giganteum HOM05D005972 ORTHO05D007548 6.3e-15 84.3 108 44.4
CAN.G730.21 Capsicum annuum HOM05D005972 ORTHO05D007548 2.4e-14 82.4 45 93.3
unitig_747.g21237 Utricularia gibba HOM05D005972 ORTHO05D007548 5.9e-13 77.8 110 41.8
BcaC08g44257 Brassica carinata HOM05D005972 ORTHO05D024007 7.2e-11 70.9 46 67.4
DCAR_006139 Daucus carota HOM05D005972 ORTHO05D007548 1.0e-09 67.0 44 72.7
CAN.G730.13 Capsicum annuum HOM05D005972 ORTHO05D007548 2.3e-09 65.9 37 89.2
arahy.Tifrunner.gnm1.ann1.L3LYUI Arachis hypogaea HOM05D005383 ORTHO05D031493 3.0e-09 65.5 46 69.6
Mapoly0188s0014 Marchantia polymorpha HOM05D005972 ORTHO05D007548 8.8e-09 63.9 101 39.6
arahy.Tifrunner.gnm1.ann1.YJH68W Arachis hypogaea HOM05D005972 ORTHO05D083016 5.7e-08 61.2 45 66.7
arahy.Tifrunner.gnm1.ann1.03MD5J Arachis hypogaea HOM05D000575 ORTHO05D011349 2.2e-07 59.3 49 61.2
Pp3c15_20500 Physcomitrium patens HOM05D005972 ORTHO05D007548 2.8e-07 58.9 99 36.4


User provided reference genes

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