Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G730.13 Capsicum annuum HOM05D005972 ORTHO05D007548 2.0e-34 148.7 81 100.0
CAN.G1940.2 Capsicum annuum HOM05D005972 ORTHO05D007548 2.3e-19 98.6 76 72.4
CAN.G1513.3 Capsicum annuum HOM05D005972 ORTHO05D007548 2.3e-11 72.0 37 97.3
CAN.G730.4 Capsicum annuum HOM05D005972 ORTHO05D007548 6.8e-11 70.5 37 94.6
Solyc11g007070.2 Solanum lycopersicum HOM05D005972 ORTHO05D007548 3.4e-10 68.2 36 91.7
Sopen11g002990 Solanum pennellii HOM05D005972 ORTHO05D007548 3.4e-10 68.2 36 91.7
Nitab4.5_0000718g0290 Nicotiana tabacum HOM05D005972 ORTHO05D007548 1.3e-09 66.2 36 88.9
Nitab4.5_0012898g0010 Nicotiana tabacum HOM05D005972 ORTHO05D007548 1.3e-09 66.2 36 88.9
CAN.G730.17 Capsicum annuum HOM05D005972 ORTHO05D007548 3.7e-09 64.7 37 89.2
Peaxi162Scf00152g01221 Petunia axillaris HOM05D005972 ORTHO05D007548 3.7e-09 64.7 36 83.3
TPR.G31487 Trifolium pratense HOM05D005972 ORTHO05D007548 1.4e-08 62.8 37 78.4
Psat0s2194g0120 Pisum sativum HOM05D005972 ORTHO05D007548 1.9e-08 62.4 48 66.7
MD13G1062400 Malus domestica HOM05D005972 ORTHO05D007548 5.4e-08 60.8 36 77.8
Aqoxy4G02449 Aquilegia oxysepala HOM05D005972 ORTHO05D007548 7.1e-08 60.5 46 65.2
Lj4g0025997 Lotus japonicus HOM05D005972 ORTHO05D007548 7.1e-08 60.5 48 62.5
CSS0039579 Camellia sinensis var. sinensis HOM05D005972 ORTHO05D007548 9.2e-08 60.1 37 75.7
Eucgr.H00021 Eucalyptus grandis HOM05D005972 ORTHO05D007548 1.2e-07 59.7 37 70.3
Medtr4g094305 Medicago truncatula HOM05D005972 ORTHO05D007548 1.2e-07 59.7 48 64.6
FvH4_4g29980 Fragaria vesca HOM05D005972 ORTHO05D007548 2.7e-07 58.5 35 74.3
FAN07G1127 Fragaria x ananassa HOM05D005972 ORTHO05D007548 2.7e-07 58.5 35 74.3
FAN12G3642 Fragaria x ananassa HOM05D005972 ORTHO05D007548 2.7e-07 58.5 35 74.3
FAN22G0246 Fragaria x ananassa HOM05D005972 ORTHO05D007548 2.7e-07 58.5 35 74.3
RcHm_v2.0_Chr4g0438261 Rosa chinensis HOM05D005972 ORTHO05D007548 2.7e-07 58.5 35 74.3
Ca_18332_v3 Cicer arietinum L. HOM05D005972 ORTHO05D007548 3.5e-07 58.2 37 70.3
ECA236G4176 Erigeron canadensis HOM05D005972 ORTHO05D007548 4.6e-07 57.8 36 72.2
Prupe.1G287600 Prunus persica HOM05D005972 ORTHO05D007548 4.6e-07 57.8 46 60.9
Glyma.05G120600 Glycine max HOM05D005972 ORTHO05D007548 6.0e-07 57.4 48 58.3
Lsat_1_v5_gn_7_80540 Lactuca sativa HOM05D005972 ORTHO05D007548 6.0e-07 57.4 36 72.2
Lj9A317T77 Lonicera japonica HOM05D005972 ORTHO05D007548 7.8e-07 57.0 36 75.0
Lalb_Chr12g0208521 Lupinus albus HOM05D005972 ORTHO05D007548 7.8e-07 57.0 36 69.4
arahy.Tifrunner.gnm1.ann1.41EE5L Arachis hypogaea HOM05D005972 ORTHO05D007548 1.3e-06 56.2 37 70.3
arahy.Tifrunner.gnm1.ann1.UKM804 Arachis hypogaea HOM05D005972 ORTHO05D007548 1.3e-06 56.2 37 70.3
TWI73G1071 Tripterygium wilfordii HOM05D005972 ORTHO05D007548 1.3e-06 56.2 37 67.6
FAN17G2742 Fragaria x ananassa HOM05D005972 ORTHO05D007548 2.3e-06 55.5 35 71.4
Glyma.08G075400 Glycine max HOM05D005972 ORTHO05D007548 2.3e-06 55.5 35 68.6
Atru.chr12.548 Acer truncatum HOM05D005972 ORTHO05D007548 3.9e-06 54.7 37 67.6
Cc02_g21900 Coffea canephora HOM05D005972 ORTHO05D007548 3.9e-06 54.7 36 75.0
Gohir.D06G178100 Gossypium hirsutum HOM05D005972 ORTHO05D007548 3.9e-06 54.7 37 70.3
Gorai.N007100 Gossypium raimondii HOM05D005972 ORTHO05D007548 3.9e-06 54.7 37 70.3
Potri.001G222400 Populus trichocarpa HOM05D005972 ORTHO05D007548 3.9e-06 54.7 37 67.6
Os04g0527500 Oryza sativa ssp. japonica HOM05D005972 ORTHO05D007548 5.1e-06 54.3 36 66.7
Sed0010539 Sechium edule HOM05D005972 ORTHO05D007548 6.6e-06 53.9 38 65.8
Gohir.A06G170300 Gossypium hirsutum HOM05D005972 ORTHO05D007548 8.6e-06 53.5 37 70.3


User provided reference genes

Program Settings