Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 1.4e-139 499.6 245 100.0
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 1.8e-118 429.5 252 86.9
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 1.9e-117 426.0 252 87.3
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 7.4e-117 424.1 252 86.9
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 9.0e-115 417.2 256 83.6
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 5.5e-112 407.9 259 80.7
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 1.0e-105 387.1 256 79.7
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 2.5e-96 355.9 250 72.0
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 3.2e-96 355.5 245 72.2
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 9.3e-96 354.0 251 72.5
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 1.3e-94 350.1 244 72.5
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 1.1e-93 347.1 251 68.5
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 1.5e-93 346.7 251 70.5
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 1.9e-93 346.3 214 78.5
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 7.4e-93 344.4 244 70.5
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 9.7e-93 344.0 245 69.4
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 2.2e-92 342.8 251 68.1
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 3.1e-91 339.0 206 77.2
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 3.1e-91 339.0 252 69.8
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 4.1e-91 338.6 243 70.0
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 6.9e-91 337.8 206 78.2
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 6.9e-91 337.8 245 69.4
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 9.1e-91 337.4 207 77.8
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 1.2e-90 337.0 240 72.9
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 1.2e-90 337.0 203 78.8
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 2.6e-90 335.9 203 79.3
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 3.4e-90 335.5 203 79.3
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 3.4e-90 335.5 232 71.1
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 4.5e-90 335.1 250 66.8
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 5.9e-90 334.7 258 66.3
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 7.7e-90 334.3 206 77.2
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 7.7e-90 334.3 206 77.2
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 1.0e-89 334.0 244 68.0
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 2.2e-89 332.8 202 77.7
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 2.2e-89 332.8 205 77.1
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 3.8e-89 332.0 226 71.7
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 5.0e-89 331.6 204 77.0
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 8.5e-89 330.9 251 67.3
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 8.5e-89 330.9 256 66.8
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 1.1e-88 330.5 252 65.5
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 1.1e-88 330.5 248 67.7
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 1.4e-88 330.1 245 65.3
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 1.4e-88 330.1 245 65.3
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 1.9e-88 329.7 294 59.9
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.9e-88 329.7 256 66.0
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 3.2e-88 328.9 256 65.2
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 3.2e-88 328.9 205 74.6
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 4.2e-88 328.6 221 72.4
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 7.2e-88 327.8 205 76.6
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 2.7e-87 325.9 200 76.5
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 4.6e-87 325.1 204 74.0
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 6.1e-87 324.7 200 76.5
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 6.1e-87 324.7 200 76.5
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 1.0e-86 323.9 201 76.1
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 1.8e-86 323.2 207 73.4
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.8e-86 323.2 248 66.5
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 2.3e-86 322.8 237 66.2
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 2.3e-86 322.8 240 67.5
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 8.8e-86 320.9 251 66.9
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 1.1e-85 320.5 246 65.9
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 1.5e-85 320.1 200 76.5
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 1.5e-85 320.1 243 67.1
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 2.0e-85 319.7 221 73.3
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 3.3e-85 318.9 202 75.7
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 7.4e-85 317.8 204 74.5
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 9.7e-85 317.4 234 69.2
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 9.7e-85 317.4 222 70.3
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 1.3e-84 317.0 255 63.9
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 2.8e-84 315.8 201 72.6
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 2.8e-84 315.8 197 76.1
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 4.8e-84 315.1 202 73.3
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 8.2e-84 314.3 243 64.6
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 1.4e-83 313.5 226 67.7
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 2.0e-82 309.7 231 68.0
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 2.6e-82 309.3 237 65.4
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 1.0e-81 307.4 203 71.4
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 1.3e-81 307.0 221 68.3
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 1.7e-81 306.6 201 72.1
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 2.2e-81 306.2 205 72.2
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 2.2e-81 306.2 202 73.8
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 2.2e-81 306.2 246 63.0
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 1.6e-79 300.1 200 70.5
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 2.7e-79 299.3 200 72.5
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 6.1e-79 298.1 188 75.5
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 2.3e-78 296.2 175 78.9
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 2.3e-78 296.2 190 72.6
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 3.9e-78 295.4 202 70.8
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 8.8e-78 294.3 251 61.0
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 1.1e-77 293.9 168 82.1
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 2.0e-77 293.1 207 67.1
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 2.0e-77 293.1 169 78.7
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 5.7e-77 291.6 243 62.6
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 1.3e-76 290.4 180 77.2
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 3.1e-75 285.8 205 68.3
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 5.9e-74 281.6 175 77.1
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 8.8e-70 267.7 170 74.7
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 1.2e-66 257.3 234 56.8
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 5.9e-66 255.0 242 55.8
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.4e-59 233.8 177 66.7
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 7.0e-59 231.5 239 54.0
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.6e-58 230.3 139 77.7
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 2.0e-53 213.4 171 56.7
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 4.1e-51 205.7 204 50.0
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 4.1e-51 205.7 225 45.8
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 3.4e-37 159.5 169 55.6
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 2.9e-36 156.4 190 43.2
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 7.8e-26 121.7 170 45.3
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.5e-24 117.5 75 74.7
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 4.0e-22 109.4 63 76.2
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 2.6e-21 106.7 207 35.7
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 2.9e-20 103.2 59 76.3
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 5.1e-17 92.4 81 56.8
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 3.5e-10 69.7 62 50.0


User provided reference genes

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