Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G726.29 Capsicum annuum HOM05D000017 ORTHO05D007253 4.3e-36 154.1 74 100.0
CAN.G864.10 Capsicum annuum HOM05D000017 ORTHO05D007253 2.2e-32 141.7 74 91.9
Sopen02g035490 Solanum pennellii HOM05D005268 ORTHO05D007253 3.0e-29 131.3 73 84.9
Sopen07g005140 Solanum pennellii HOM05D000017 ORTHO05D000013 3.0e-29 131.3 73 84.9
Sopen01g028660 Solanum pennellii HOM05D001906 ORTHO05D007253 1.3e-24 115.9 73 78.1
Sopen07g006090 Solanum pennellii HOM05D000017 ORTHO05D012656 4.8e-19 97.4 72 59.7
Sopen11g024330 Solanum pennellii HOM05D011435 ORTHO05D012656 4.8e-19 97.4 72 59.7
Sopen07g027950 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-18 94.4 73 60.3
Sopen06g017080 Solanum pennellii HOM05D000017 ORTHO05D000013 4.2e-15 84.3 71 54.9
Sopen07g014380 Solanum pennellii HOM05D000017 ORTHO05D000013 4.2e-15 84.3 71 54.9
Sopen08g006100 Solanum pennellii HOM05D000017 ORTHO05D000013 4.2e-15 84.3 71 54.9
CAN.G1587.5 Capsicum annuum HOM05D000017 ORTHO05D000013 7.9e-14 80.1 73 52.1
CAN.G1649.2 Capsicum annuum HOM05D005268 ORTHO05D011324 1.8e-13 79.0 72 54.2
CAN.G459.42 Capsicum annuum HOM05D005268 ORTHO05D011324 5.1e-13 77.4 70 52.9
Sopen03g007640 Solanum pennellii HOM05D000017 ORTHO05D000013 5.1e-13 77.4 69 49.3
Sopen05g014780 Solanum pennellii HOM05D000017 ORTHO05D000013 5.1e-13 77.4 69 49.3
Sopen05g027130 Solanum pennellii HOM05D000017 ORTHO05D000013 5.1e-13 77.4 69 49.3
Sopen08g022130 Solanum pennellii HOM05D000017 ORTHO05D000013 5.1e-13 77.4 69 49.3
Sopen11g024180 Solanum pennellii HOM05D000017 ORTHO05D000013 5.1e-13 77.4 69 49.3
CAN.G1094.1 Capsicum annuum HOM05D000017 ORTHO05D000013 6.7e-13 77.0 71 47.9
QL08p005699 Quercus lobata HOM05D000017 ORTHO05D007253 1.1e-12 76.3 73 49.3
QL08p006036 Quercus lobata HOM05D000017 ORTHO05D007253 1.1e-12 76.3 73 49.3
QL08p013497 Quercus lobata HOM05D000017 ORTHO05D007253 1.1e-12 76.3 73 49.3
Sopen01g034980 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-12 76.3 61 57.4
Sopen03g022260 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-12 76.3 61 57.4
Sopen04g029950 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-12 76.3 61 57.4
Dinv03558 Davidia involucrata HOM05D007975 ORTHO05D010011 2.5e-12 75.1 73 42.5
Dinv03568 Davidia involucrata HOM05D000017 ORTHO05D009679 3.3e-12 74.7 64 53.1
Dinv26922 Davidia involucrata HOM05D000017 ORTHO05D009679 4.3e-12 74.3 64 53.1
Ca_02147_v3 Cicer arietinum L. HOM05D000017 ORTHO05D007253 9.6e-12 73.2 71 46.5
Dinv10054 Davidia involucrata HOM05D000017 ORTHO05D000013 1.4e-10 69.3 73 38.4
Ca_22995_v3 Cicer arietinum L. HOM05D000017 ORTHO05D007253 1.8e-10 68.9 71 43.7
Dinv00066 Davidia involucrata HOM05D008341 ORTHO05D007253 1.8e-10 68.9 71 45.1
Dinv09296 Davidia involucrata HOM05D001162 ORTHO05D001218 5.3e-10 67.4 64 46.9
ECA234G4280 Erigeron canadensis HOM05D000774 ORTHO05D000602 6.9e-10 67.0 71 45.1
QL04p066041 Quercus lobata HOM05D000017 ORTHO05D000013 6.9e-10 67.0 67 47.8
TPR.G31011 Trifolium pratense HOM05D000017 ORTHO05D000013 1.2e-09 66.2 60 48.3
TWI09G0713 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.0e-09 65.5 73 41.1
TWI31G0342 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.0e-09 65.5 73 41.1
TWI36G0864 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.0e-09 65.5 73 41.1
TWI75G0784 Tripterygium wilfordii HOM05D000017 ORTHO05D007253 2.0e-09 65.5 73 41.1
CSS0015681 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.6e-09 65.1 73 38.4
TWI75G0917 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 5.8e-09 63.9 73 39.7
CSS0001578 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 7.6e-09 63.5 73 37.0
CSS0007981 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 7.6e-09 63.5 73 37.0
CSS0014296 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 7.6e-09 63.5 73 37.0
HanXRQChr15g0493111 Helianthus annuus HOM05D002876 ORTHO05D007253 7.6e-09 63.5 71 39.4
SHI45280 Sapria himalayana HOM05D000017 ORTHO05D000013 7.6e-09 63.5 72 41.7
TPR.G3229 Trifolium pratense HOM05D000017 ORTHO05D007253 7.6e-09 63.5 65 43.1
CSS0008184 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.0e-08 63.2 73 37.0
CSS0015352 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.0e-08 63.2 73 37.0
CSS0025680 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.0e-08 63.2 73 37.0
TWI18G0813 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.0e-08 63.2 64 43.8
CSS0000290 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.3e-08 62.8 73 37.0
CSS0042409 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.3e-08 62.8 73 37.0
CSS0024128 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.7e-08 62.4 73 37.0
TWI09G0645 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.7e-08 62.4 73 41.1
TWI38G0856 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.7e-08 62.4 73 41.1
QL03p010991 Quercus lobata HOM05D000017 ORTHO05D000013 2.2e-08 62.0 60 48.3
CSS0024078 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.9e-08 61.6 73 37.0
Ca_06640_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 3.8e-08 61.2 62 43.5
Ca_06557_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 4.9e-08 60.8 62 43.5
Ca_06856_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 4.9e-08 60.8 62 43.5
Ca_18962_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 4.9e-08 60.8 62 45.2
TWI31G0287 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.9e-08 60.8 73 39.7
Ah.13g072940 Amaranthus hybridus HOM05D000017 ORTHO05D007253 6.5e-08 60.5 75 40.0
CSS0031758 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 6.5e-08 60.5 73 35.6
Ca_16174_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 6.5e-08 60.5 71 39.4
TPR.G15353 Trifolium pratense HOM05D000017 ORTHO05D000013 6.5e-08 60.5 64 42.2
TPR.G35471 Trifolium pratense HOM05D000017 ORTHO05D009679 6.5e-08 60.5 61 41.0
arahy.Tifrunner.gnm1.ann1.ZR77QB Arachis hypogaea HOM05D000017 ORTHO05D007253 8.4e-08 60.1 70 40.0
Dinv01505 Davidia involucrata HOM05D007975 ORTHO05D010011 8.4e-08 60.1 66 42.4
ECA246G1488 Erigeron canadensis HOM05D000017 ORTHO05D000013 8.4e-08 60.1 73 41.1
Ca_14871_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 1.1e-07 59.7 71 38.0
ClCG06G006800 Citrullus lanatus HOM05D000176 ORTHO05D000013 1.1e-07 59.7 64 42.2
ECA246G1601 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.1e-07 59.7 69 39.1
TPR.G11122 Trifolium pratense HOM05D000017 ORTHO05D000013 1.1e-07 59.7 64 40.6
ECA233G5442 Erigeron canadensis HOM05D000214 ORTHO05D000131 1.9e-07 58.9 73 41.1
ECA247G2993 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.5e-07 58.5 70 44.3
HPP92_015904 Vanilla planifolia HOM05D000017 ORTHO05D000013 2.5e-07 58.5 73 41.1
ECA247G1535 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.2e-07 58.2 72 40.3
CSS0003513 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 4.2e-07 57.8 73 39.7
CSS0010991 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 4.2e-07 57.8 73 39.7
CSS0031504 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 4.2e-07 57.8 73 39.7
CSS0034764 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 4.2e-07 57.8 73 39.7
CSS0044371 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 4.2e-07 57.8 73 39.7
CSS0050215 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 4.2e-07 57.8 73 39.7
ECA248G0416 Erigeron canadensis HOM05D000017 ORTHO05D000013 4.2e-07 57.8 73 41.1
ECA232G3219 Erigeron canadensis HOM05D000017 ORTHO05D000013 5.5e-07 57.4 70 42.9
ECA233G4715 Erigeron canadensis HOM05D000017 ORTHO05D000013 5.5e-07 57.4 70 42.9
ECA234G2417 Erigeron canadensis HOM05D000015 ORTHO05D000270 5.5e-07 57.4 70 42.9
ECA236G4734 Erigeron canadensis HOM05D000537 ORTHO05D000415 5.5e-07 57.4 70 42.9
ECA238G0187 Erigeron canadensis HOM05D000017 ORTHO05D000013 5.5e-07 57.4 70 42.9
ECA238G0708 Erigeron canadensis HOM05D000506 ORTHO05D000369 5.5e-07 57.4 70 42.9
ECA248G1033 Erigeron canadensis HOM05D000017 ORTHO05D000013 5.5e-07 57.4 70 42.9
Ca_02565_v3 Cicer arietinum L. HOM05D007471 ORTHO05D009481 7.1e-07 57.0 62 41.9
ECA233G0651 Erigeron canadensis HOM05D000017 ORTHO05D000013 7.1e-07 57.0 70 42.9
ECA234G2069 Erigeron canadensis HOM05D000017 ORTHO05D000013 7.1e-07 57.0 73 39.7
Ca_12267_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 9.3e-07 56.6 71 36.6
ECA232G0557 Erigeron canadensis HOM05D000017 ORTHO05D000013 9.3e-07 56.6 70 42.9
TPR.G36775 Trifolium pratense HOM05D000017 ORTHO05D000013 9.3e-07 56.6 51 47.1
CSS0045149 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.2e-06 56.2 73 38.4
ECA236G1778 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.2e-06 56.2 73 38.4
ECA238G3207 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.2e-06 56.2 73 41.1
ECA240G4628 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.2e-06 56.2 69 37.7
Medtr8g464080 Medicago truncatula HOM05D023704 ORTHO05D020438 1.2e-06 56.2 71 35.2
MSTRG.13409 Avicennia marina HOM05D000017 ORTHO05D000013 1.6e-06 55.8 71 35.2
CSS0003535 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.6e-06 55.8 73 38.4
Ca_12624_v3 Cicer arietinum L. HOM05D010632 ORTHO05D007253 1.6e-06 55.8 62 40.3
ECA233G5270 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.6e-06 55.8 70 42.9
ECA234G0932 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.6e-06 55.8 70 41.4
ECA236G2578 Erigeron canadensis HOM05D001306 ORTHO05D001159 1.6e-06 55.8 70 41.4
ECA238G1198 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.6e-06 55.8 70 41.4
Lj6g0013797 Lotus japonicus HOM05D000017 ORTHO05D000013 1.6e-06 55.8 65 40.0
ECA233G4574 Erigeron canadensis HOM05D010150 ORTHO05D017904 2.1e-06 55.5 74 36.5
ECA247G3508 Erigeron canadensis HOM05D001162 ORTHO05D000013 2.1e-06 55.5 70 40.0
ECA248G2732 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.1e-06 55.5 70 41.4
Ca_26949_v3 Cicer arietinum L. HOM05D000017 ORTHO05D007253 2.7e-06 55.1 69 36.2
Cc02_g31080 Coffea canephora HOM05D000017 ORTHO05D000013 2.7e-06 55.1 51 47.1
Dinv18659 Davidia involucrata HOM05D000017 ORTHO05D000013 2.7e-06 55.1 71 38.0
CSS0035420 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.5e-06 54.7 55 41.8
ECA240G4803 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.5e-06 54.7 70 41.4
TPR.G1787 Trifolium pratense HOM05D000017 ORTHO05D000013 3.5e-06 54.7 61 41.0
Ca_02580_v3 Cicer arietinum L. HOM05D000017 ORTHO05D007253 4.6e-06 54.3 60 36.7
Ca_12796_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 4.6e-06 54.3 69 34.8
ECA236G3469 Erigeron canadensis HOM05D000017 ORTHO05D000013 4.6e-06 54.3 70 41.4
ECA246G2772 Erigeron canadensis HOM05D000017 ORTHO05D000013 4.6e-06 54.3 70 40.0
CSS0024407 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 6.0e-06 53.9 73 37.0
ECA240G2795 Erigeron canadensis HOM05D000017 ORTHO05D000013 6.0e-06 53.9 70 41.4
ECA246G2582 Erigeron canadensis HOM05D000017 ORTHO05D000013 6.0e-06 53.9 70 40.0
AL7G47630 Arabidopsis lyrata HOM05D000017 ORTHO05D000013 7.9e-06 53.5 72 37.5


User provided reference genes

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