Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 7.0e-215 750.4 383 100.0
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 1.3e-189 666.4 382 88.5
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 3.0e-189 665.2 381 89.0
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 1.6e-187 659.4 387 87.3
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 9.6e-180 633.6 379 84.7
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 9.6e-180 633.6 381 84.5
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 2.0e-169 599.4 380 81.1
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 3.1e-138 495.7 358 69.6
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 3.9e-133 478.8 388 62.6
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 7.4e-132 474.6 392 62.2
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 3.1e-130 469.2 381 64.3
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 1.6e-126 456.8 307 72.6
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 1.1e-124 450.7 311 70.7
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 1.5e-124 450.3 376 62.8
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 2.6e-124 449.5 379 62.3
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 3.3e-124 449.1 309 71.2
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 3.3e-124 449.1 311 70.1
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 9.7e-124 447.6 302 71.5
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 3.7e-123 445.7 381 61.7
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 4.8e-123 445.3 382 61.8
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.1e-122 444.1 315 69.5
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 1.4e-122 443.7 378 60.6
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 1.4e-122 443.7 372 61.6
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 3.1e-122 442.6 374 62.6
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 1.2e-121 440.7 385 59.2
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 3.5e-121 439.1 390 60.0
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 4.5e-121 438.7 315 69.2
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.0e-120 437.6 315 68.3
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 1.7e-120 436.8 353 62.9
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 2.9e-120 436.0 315 68.9
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 3.8e-120 435.6 334 67.7
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 5.0e-120 435.3 364 60.4
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 3.2e-119 432.6 312 66.0
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 4.2e-119 432.2 317 66.9
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 5.5e-119 431.8 362 58.8
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 5.5e-119 431.8 378 58.7
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 7.2e-119 431.4 324 64.5
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 7.2e-119 431.4 386 59.6
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 9.4e-119 431.0 303 70.3
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 1.2e-118 430.6 319 66.8
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 1.2e-118 430.6 312 65.7
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.1e-118 429.9 332 65.7
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 3.6e-118 429.1 357 59.9
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 3.6e-118 429.1 355 62.8
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 4.7e-118 428.7 324 63.9
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 1.0e-117 427.6 324 63.6
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 1.0e-117 427.6 324 63.6
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 1.8e-117 426.8 314 64.6
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 2.3e-117 426.4 331 62.8
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 5.2e-117 425.2 337 62.6
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 8.8e-117 424.5 320 63.8
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 1.1e-116 424.1 312 65.4
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 1.5e-116 423.7 364 61.3
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 1.5e-116 423.7 322 63.7
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 2.6e-116 422.9 316 64.2
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 3.3e-116 422.5 377 59.2
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 9.7e-116 421.0 449 54.3
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 9.7e-116 421.0 350 62.3
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 2.2e-115 419.9 362 58.6
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 2.2e-115 419.9 353 60.3
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 4.8e-115 418.7 305 68.9
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 1.8e-114 416.8 385 57.1
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 4.1e-114 415.6 377 58.9
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 5.3e-114 415.2 391 55.8
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 7.0e-114 414.8 297 66.3
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 9.1e-114 414.5 357 59.1
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 1.2e-113 414.1 310 63.9
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 1.2e-113 414.1 310 63.9
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 1.6e-113 413.7 306 64.1
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 2.0e-113 413.3 319 65.5
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 4.5e-113 412.1 316 65.2
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 7.7e-113 411.4 305 67.2
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 1.0e-112 411.0 330 63.6
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 1.3e-112 410.6 313 63.6
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 2.9e-112 409.5 304 66.4
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 5.0e-112 408.7 327 63.6
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 2.7e-110 402.9 297 64.3
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 8.0e-110 401.4 323 61.0
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 7.5e-108 394.8 385 56.1
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 1.3e-107 394.0 337 61.1
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 6.3e-107 391.7 381 55.6
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 2.0e-105 386.7 304 64.1
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 5.9e-105 385.2 274 66.1
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 5.0e-104 382.1 286 65.7
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 1.5e-103 380.6 272 69.1
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 7.2e-103 378.3 353 55.8
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 3.6e-102 375.9 359 56.0
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 5.2e-101 372.1 320 56.9
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 5.7e-100 368.6 351 56.4
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 3.7e-99 365.9 304 58.6
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.4e-98 363.2 278 66.2
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 4.1e-98 362.5 294 61.2
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 3.3e-95 352.8 371 49.3
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 5.6e-95 352.1 225 76.4
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 1.2e-94 350.9 346 53.8
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 2.8e-94 349.7 327 57.5
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 2.9e-91 339.7 277 60.6
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 1.1e-87 327.8 521 40.7
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 9.5e-87 324.7 301 51.8
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.3e-83 314.3 307 56.7
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 1.6e-81 307.4 319 47.6
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 6.8e-77 292.0 263 56.7
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 5.4e-74 282.3 303 46.5
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 9.2e-74 281.6 299 47.2
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 2.7e-73 280.0 322 41.3
Manes.15G185701 Manihot esculenta HOM05D006137 ORTHO05D007697 1.0e-64 251.5 237 58.2
Oeu033557.2 Olea europaea HOM05D006137 ORTHO05D007697 7.6e-60 235.3 185 62.2
Ca_25185_v3 Cicer arietinum L. HOM05D006137 ORTHO05D007697 1.4e-58 231.1 209 56.0
Hund09822 Selenicereus undatus HOM05D006137 ORTHO05D007697 3.3e-55 219.9 152 69.7
AUR62002644 Chenopodium quinoa HOM05D006137 ORTHO05D007697 4.3e-55 219.5 157 70.7
AUR62002645 Chenopodium quinoa HOM05D006137 ORTHO05D007697 4.5e-44 183.0 207 48.8
AUR62040998 Chenopodium quinoa HOM05D006137 ORTHO05D007697 3.8e-43 179.9 134 65.7
C03p78000 Brassica napus HOM05D006137 ORTHO05D007697 4.9e-43 179.5 155 58.7
Hund09821 Selenicereus undatus HOM05D006137 ORTHO05D000006 5.6e-39 166.0 169 52.1
BolC1t02019H Brassica oleracea HOM05D006137 ORTHO05D007697 2.8e-38 163.7 160 53.1
CBR_g18978 Chara braunii HOM05D006137 ORTHO05D007697 2.7e-33 147.1 189 42.9
C01p20920 Brassica napus HOM05D006137 ORTHO05D007697 3.5e-33 146.7 165 47.3
BolC3t20061H Brassica oleracea HOM05D006137 ORTHO05D007697 6.0e-33 146.0 165 48.5
MCO11G470 Micromonas commoda HOM05D006137 ORTHO05D007697 1.3e-30 138.3 196 36.7
Glyma.07G152633 Glycine max HOM05D006137 ORTHO05D007697 1.7e-27 127.9 112 56.2
AUR62040999 Chenopodium quinoa HOM05D006137 ORTHO05D007697 3.2e-26 123.6 89 69.7
PRCOL_00002339 Prasinoderma coloniale HOM05D006137 ORTHO05D007697 3.9e-24 116.7 195 36.4
Medtr1g009450 Medicago truncatula HOM05D006137 ORTHO05D007697 1.8e-21 107.8 124 48.4
C02p41610 Brassica napus HOM05D006137 ORTHO05D007697 1.2e-09 68.6 36 77.8
BolC2t10179H Brassica oleracea HOM05D006137 ORTHO05D007697 1.2e-09 68.6 36 77.8
BcaC09g50780 Brassica carinata HOM05D006137 ORTHO05D007697 2.7e-09 67.4 99 41.4
BolC2t11174H Brassica oleracea HOM05D006137 ORTHO05D007697 1.1e-07 62.0 31 80.6
SEGI_36463 Sequoiadendron giganteum HOM05D002058 ORTHO05D009216 2.6e-07 60.8 128 29.7
Mapoly0035s0139 Marchantia polymorpha HOM05D002058 ORTHO05D003758 1.3e-06 58.5 155 27.7
MCO12G135 Micromonas commoda HOM05D002058 ORTHO05D003758 2.8e-06 57.4 174 24.1


User provided reference genes

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