Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 3.2e-239 831.2 392 100.0
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 8.6e-168 594.0 457 65.4
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 1.2e-164 583.6 457 64.8
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 3.4e-156 555.4 462 62.1
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 2.1e-153 546.2 444 62.2
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 6.2e-150 534.6 460 61.3
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 1.1e-117 427.6 462 47.8
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 5.1e-112 408.7 456 47.8
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 6.7e-112 408.3 453 47.5
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 2.5e-111 406.4 437 47.4
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 5.7e-111 405.2 452 45.6
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.8e-109 400.2 455 46.2
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 2.4e-109 399.8 455 45.3
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 5.3e-109 398.7 453 46.4
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 5.3e-109 398.7 458 45.0
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 9.0e-109 397.9 452 45.1
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 1.2e-108 397.5 457 46.0
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.5e-108 397.1 458 44.8
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 4.5e-108 395.6 455 44.4
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 1.7e-107 393.7 453 45.9
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 6.5e-107 391.7 455 44.6
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 1.6e-105 387.1 436 47.5
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 2.1e-105 386.7 439 46.5
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 3.6e-105 386.0 451 44.6
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 3.9e-104 382.5 452 43.6
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 2.5e-103 379.8 448 43.8
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 4.3e-103 379.0 452 42.9
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 4.3e-103 379.0 445 42.9
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 5.7e-103 378.6 464 42.9
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 5.7e-103 378.6 458 45.4
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 7.4e-103 378.3 447 46.1
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 2.8e-102 376.3 462 42.4
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 2.4e-101 373.2 447 44.5
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 7.7e-100 368.2 449 43.9
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 7.7e-100 368.2 446 45.5
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 1.0e-99 367.9 460 43.0
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 2.2e-99 366.7 464 42.5
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 2.9e-99 366.3 454 44.5
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 5.0e-99 365.5 443 42.9
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 1.9e-98 363.6 445 44.0
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 2.7e-97 359.8 457 43.8
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 4.6e-97 359.0 446 45.3
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 3.9e-96 355.9 467 41.5
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 3.9e-96 355.9 463 42.5
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 5.1e-96 355.5 449 41.9
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 6.7e-96 355.1 440 42.7
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 1.1e-95 354.4 446 45.1
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 1.5e-95 354.0 459 42.3
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 2.6e-95 353.2 462 42.0
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 3.3e-95 352.8 445 44.0
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 3.3e-95 352.8 440 42.3
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 3.3e-95 352.8 440 42.5
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 4.4e-95 352.4 468 40.6
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 7.4e-95 351.7 433 42.7
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 2.2e-94 350.1 440 41.8
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 4.8e-94 349.0 381 46.5
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 1.1e-93 347.8 446 40.6
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 1.8e-93 347.1 456 41.0
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 2.4e-93 346.7 443 42.0
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 2.4e-93 346.7 440 41.6
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 4.1e-93 345.9 434 43.1
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 1.5e-92 344.0 460 42.6
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 3.4e-92 342.8 442 42.5
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 5.9e-92 342.0 460 42.4
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 5.9e-92 342.0 460 42.2
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 5.9e-92 342.0 433 42.3
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 2.7e-89 333.2 444 40.8
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 1.0e-88 331.3 457 40.9
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 1.4e-88 330.9 434 41.7
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 3.0e-88 329.7 441 43.3
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 7.4e-87 325.1 433 42.3
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 2.8e-86 323.2 454 41.2
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 5.3e-85 318.9 419 41.8
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 1.2e-84 317.8 424 39.9
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 4.5e-84 315.8 398 42.5
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 7.7e-84 315.1 429 40.8
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 1.5e-82 310.8 435 39.3
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 2.5e-82 310.1 416 42.8
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 2.5e-82 310.1 416 42.8
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 1.2e-81 307.8 399 40.4
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 6.1e-81 305.4 414 41.8
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 1.4e-80 304.3 452 36.5
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 1.8e-80 303.9 403 42.9
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 2.3e-80 303.5 416 42.3
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 4.0e-80 302.8 402 42.5
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 4.0e-80 302.8 414 40.8
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 4.4e-79 299.3 391 42.2
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 7.5e-79 298.5 422 40.8
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 1.3e-78 297.7 431 38.1
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 4.8e-78 295.8 417 40.8
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 6.3e-78 295.4 411 41.4
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 6.3e-78 295.4 420 39.8
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 8.2e-78 295.0 421 40.9
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 2.4e-77 293.5 412 40.8
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 4.4e-71 272.7 478 34.7
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 1.1e-69 268.1 412 39.6
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 1.1e-66 258.1 308 44.5
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 4.1e-61 239.6 316 44.6
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 4.5e-60 236.1 335 37.0
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 1.7e-54 217.6 474 30.0
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 6.4e-54 215.7 291 43.6
TAR628G0857 Trochodendron aralioides HOM05D006323 ORTHO05D007827 8.6e-51 205.3 187 50.3
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 1.1e-48 198.4 174 54.0
COL.COLO4_28496 Corchorus olitorius HOM05D006323 ORTHO05D007827 1.8e-48 197.6 190 49.5
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 1.2e-39 168.3 326 31.6
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 2.9e-38 163.7 506 26.3
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 6.0e-36 156.0 347 31.7
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 2.1e-28 131.0 208 38.5
Eucgr.L02719 Eucalyptus grandis HOM05D006323 ORTHO05D007827 8.1e-25 119.0 150 42.7
FvH4_3g44630 Fragaria vesca HOM05D006323 ORTHO05D007827 1.1e-24 118.6 90 57.8
HPP92_013381 Vanilla planifolia HOM05D006323 ORTHO05D007827 1.1e-24 118.6 193 34.7
CBR_g25752 Chara braunii HOM05D006323 ORTHO05D007827 5.2e-24 116.3 541 21.4
AagrBONN_evm.TU.Sc2ySwM_362.2944 Anthoceros agrestis HOM05D006323 ORTHO05D007827 1.2e-23 115.2 204 32.4
TAR623G1714 Trochodendron aralioides HOM05D006323 ORTHO05D007827 9.9e-23 112.1 97 53.6
SEGI_04434 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 1.9e-18 97.8 158 34.8
unitig_8.g4875 Utricularia gibba HOM05D006323 ORTHO05D007827 5.6e-18 96.3 106 44.3
COL.COLO4_28497 Corchorus olitorius HOM05D006323 ORTHO05D007827 7.3e-18 95.9 128 37.5
MD08G1081200 Malus domestica HOM05D006323 ORTHO05D007827 1.2e-15 88.6 116 38.8
TAR623G1335 Trochodendron aralioides HOM05D006323 ORTHO05D007827 7.6e-15 85.9 63 57.1
QL04p027551 Quercus lobata HOM05D006323 ORTHO05D007827 9.3e-13 79.0 87 41.4
Eucgr.C01112 Eucalyptus grandis HOM05D006323 ORTHO05D007827 2.1e-12 77.8 91 44.0


User provided reference genes

Program Settings