Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G710.39 Capsicum annuum HOM05D006956 ORTHO05D008824 7.7e-112 407.1 204 100.0
Solyc09g098220.3 Solanum lycopersicum HOM05D006956 ORTHO05D008824 3.2e-105 385.2 204 95.1
Sopen09g036160 Solanum pennellii HOM05D006956 ORTHO05D008824 3.2e-105 385.2 204 95.1
Peaxi162Scf00286g00448 Petunia axillaris HOM05D006956 ORTHO05D008824 4.6e-104 381.3 203 93.1
Nitab4.5_0001526g0100 Nicotiana tabacum HOM05D006956 ORTHO05D008824 6.2e-93 344.4 222 81.1
CSS0020916 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 1.7e-87 326.2 206 77.7
Dinv19614 Davidia involucrata HOM05D006956 ORTHO05D008824 1.7e-87 326.2 199 78.9
MD10G1203100 Malus domestica HOM05D006956 ORTHO05D008824 5.1e-87 324.7 201 78.1
Rhsim04G0005600 Rhododendron simsii HOM05D006956 ORTHO05D008824 1.5e-86 323.2 200 78.0
Cc05_g16140 Coffea canephora HOM05D006956 ORTHO05D008824 6.2e-85 317.8 199 76.4
Haze_03154 Corylus avellana HOM05D006956 ORTHO05D008824 6.2e-85 317.8 198 78.3
PGSC0003DMG400014067 Solanum tuberosum HOM05D006956 ORTHO05D008466 6.2e-85 317.8 169 94.1
COL.COLO4_07377 Corchorus olitorius HOM05D006956 ORTHO05D008824 8.1e-85 317.4 200 76.0
QL04p076576 Quercus lobata HOM05D006956 ORTHO05D008824 1.1e-84 317.0 204 76.5
TAR362G0399 Trochodendron aralioides HOM05D006956 ORTHO05D008824 1.1e-84 317.0 202 76.2
Prupe.4G139000 Prunus persica HOM05D006956 ORTHO05D008824 2.3e-84 315.8 196 77.6
Gorai.007G335600 Gossypium raimondii HOM05D006956 ORTHO05D008824 3.1e-84 315.5 197 77.7
Phvul.005G057800 Phaseolus vulgaris HOM05D006956 ORTHO05D008824 8.9e-84 313.9 198 74.7
MSTRG.13068 Avicennia marina HOM05D006956 ORTHO05D008824 1.2e-83 313.5 204 74.0
Cfa010806 Carpinus fangiana HOM05D006956 ORTHO05D008824 2.0e-83 312.8 194 79.4
CiPaw.11G066300 Carya illinoinensis HOM05D006956 ORTHO05D008824 2.6e-83 312.4 204 76.0
Hma1.2p1_0334F.1_g128720 Hydrangea macrophylla HOM05D006956 ORTHO05D008824 3.4e-83 312.0 204 75.5
Migut.H01688 Erythranthe guttata HOM05D006956 ORTHO05D008824 4.4e-83 311.6 204 75.5
TWI39G0297 Tripterygium wilfordii HOM05D006956 ORTHO05D008824 5.8e-83 311.2 199 75.4
CSS0000379 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 7.6e-83 310.8 208 75.5
VMungo1080G0523 Vigna mungo HOM05D006956 ORTHO05D008824 7.6e-83 310.8 198 73.2
Gohir.A11G291500 Gossypium hirsutum HOM05D006956 ORTHO05D008824 1.7e-82 309.7 193 78.2
vmacro00957 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 1.7e-82 309.7 197 76.1
Nn7g38051 Nelumbo nucifera HOM05D006956 ORTHO05D008824 2.9e-82 308.9 198 74.2
Potri.001G439000 Populus trichocarpa HOM05D006956 ORTHO05D008824 2.9e-82 308.9 199 75.4
Thecc.07G151600 Theobroma cacao HOM05D006956 ORTHO05D008824 2.9e-82 308.9 201 75.1
FvH4_3g15651 Fragaria vesca HOM05D006956 ORTHO05D008824 4.9e-82 308.1 199 74.4
Lj3g0018815 Lotus japonicus HOM05D006956 ORTHO05D008824 4.9e-82 308.1 197 73.6
Sabra16G0296900 Salix brachista HOM05D006956 ORTHO05D008824 1.1e-81 307.0 206 73.3
Ciclev10022296m.g Citrus clementina HOM05D006956 ORTHO05D008824 1.4e-81 306.6 202 77.2
PGR142G1185 Punica granatum HOM05D006956 ORTHO05D008824 1.4e-81 306.6 192 75.0
CsaV3_6G013760 Cucumis sativus L. HOM05D006956 ORTHO05D008824 1.9e-81 306.2 201 73.6
RcHm_v2.0_Chr5g0026331 Rosa chinensis HOM05D006956 ORTHO05D008824 2.4e-81 305.8 199 74.4
Glyma.15G256600 Glycine max HOM05D006956 ORTHO05D008824 4.1e-81 305.1 198 73.7
Psat1g012040 Pisum sativum HOM05D006956 ORTHO05D008824 9.2e-81 303.9 199 71.9
TPR.G9744 Trifolium pratense HOM05D006956 ORTHO05D008824 1.2e-80 303.5 197 72.1
MELO3C019670.2 Cucumis melo HOM05D006956 ORTHO05D008824 2.1e-80 302.8 195 73.8
Atru.chr9.1519 Acer truncatum HOM05D006956 ORTHO05D008824 2.7e-80 302.4 196 74.0
FAN21G1707 Fragaria x ananassa HOM05D006956 ORTHO05D008824 3.5e-80 302.0 199 72.9
Lalb_Chr20g0108711 Lupinus albus HOM05D006956 ORTHO05D008824 4.6e-80 301.6 202 72.3
Medtr2g069340 Medicago truncatula HOM05D006956 ORTHO05D008824 4.6e-80 301.6 197 71.6
Manes.06G172400 Manihot esculenta HOM05D006956 ORTHO05D008824 1.0e-79 300.4 200 73.0
Ca_03670_v3 Cicer arietinum L. HOM05D006956 ORTHO05D008824 1.7e-79 299.7 197 72.1
SalBow5G4858 Salvia bowleyana HOM05D006956 ORTHO05D008824 2.3e-79 299.3 199 71.4
CANSAT54G1214 Cannabis sativa HOM05D006956 ORTHO05D008824 1.5e-78 296.6 196 75.5
FAN11G3326 Fragaria x ananassa HOM05D006956 ORTHO05D008824 1.9e-78 296.2 216 68.1
Eucgr.A00498 Eucalyptus grandis HOM05D006956 ORTHO05D008824 4.3e-78 295.0 202 70.3
Lj3g0016125 Lotus japonicus HOM05D006956 ORTHO05D008824 5.6e-78 294.7 197 70.1
ClCG02G018480 Citrullus lanatus HOM05D006956 ORTHO05D008824 2.1e-77 292.7 215 66.5
arahy.Tifrunner.gnm1.ann1.JC2BA5 Arachis hypogaea HOM05D006956 ORTHO05D008824 1.2e-75 287.0 197 67.0
BraA09t41455Z Brassica rapa HOM05D006956 ORTHO05D008824 1.7e-74 283.1 202 65.8
Aqoxy1G01495 Aquilegia oxysepala HOM05D006956 ORTHO05D008824 2.9e-74 282.3 195 69.2
C08p44410 Brassica napus HOM05D006956 ORTHO05D008824 6.4e-74 281.2 203 64.5
A09p60820 Brassica napus HOM05D006956 ORTHO05D008824 8.4e-74 280.8 202 65.3
HPP92_011671 Vanilla planifolia HOM05D006956 ORTHO05D008824 1.1e-73 280.4 200 66.5
BolC8t51982H Brassica oleracea HOM05D006956 ORTHO05D008824 1.4e-73 280.0 202 65.3
AL1G28750 Arabidopsis lyrata HOM05D006956 ORTHO05D008824 1.9e-73 279.6 200 67.0
SGA_v2.0_scaffold49G18176 Striga asiatica HOM05D006956 ORTHO05D008824 1.9e-73 279.6 201 67.7
AT1G16590 Arabidopsis thaliana HOM05D006956 ORTHO05D008824 2.4e-73 279.3 200 66.0
AUR62042418 Chenopodium quinoa HOM05D006956 ORTHO05D008824 4.2e-73 278.5 189 69.3
Cfa010808 Carpinus fangiana HOM05D006956 ORTHO05D008824 5.4e-73 278.1 175 77.7
THA.LOC104808124 Tarenaya hassleriana HOM05D006956 ORTHO05D008824 7.1e-73 277.7 198 68.2
Thhalv10008810m.g Eutrema salsugineum HOM05D006956 ORTHO05D008824 9.3e-73 277.3 200 66.5
AUR62026907 Chenopodium quinoa HOM05D006956 ORTHO05D008824 2.7e-72 275.8 195 67.7
arahy.Tifrunner.gnm1.ann1.82TPB7 Arachis hypogaea HOM05D006956 ORTHO05D008824 2.3e-71 272.7 228 58.3
GSVIVG01020406001 Vitis vinifera HOM05D006956 ORTHO05D008824 6.6e-71 271.2 171 76.0
Zm00001eb198240 Zea mays HOM05D006956 ORTHO05D008824 2.5e-70 269.2 203 64.0
Aa31LG7G1120 Aethionema arabicum HOM05D006956 ORTHO05D008824 3.3e-70 268.9 210 62.4
CARHR017060 Cardamine hirsuta HOM05D006956 ORTHO05D008824 9.6e-70 267.3 198 63.1
CDE05G1956 Ceratophyllum demersum HOM05D003342 ORTHO05D003861 2.0e-67 259.6 194 66.0
Carub.0001s1634 Capsella rubella HOM05D006956 ORTHO05D008824 3.8e-66 255.4 199 62.8
PSO210G3417 Papaver somniferum HOM05D006956 ORTHO05D008824 3.8e-66 255.4 192 64.1
PSO223G0077 Papaver somniferum HOM05D006956 ORTHO05D008824 3.8e-66 255.4 195 63.6
HanXRQChr08g0231891 Helianthus annuus HOM05D006956 ORTHO05D008824 1.9e-62 243.0 200 59.5
Sp1g14740 Schrenkiella parvula HOM05D006956 ORTHO05D008824 1.3e-61 240.4 201 58.7
Sc08g0007560 Simmondsia chinensis HOM05D006956 ORTHO05D008824 1.3e-61 240.4 159 69.8
Sed0013658 Sechium edule HOM05D006956 ORTHO05D008824 6.9e-60 234.6 152 73.0
MBI18_g45405_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 1.3e-58 230.3 158 69.0
ECA247G3084 Erigeron canadensis HOM05D006956 ORTHO05D008824 3.2e-57 225.7 196 57.7
Prupe.4G141800 Prunus persica HOM05D006956 ORTHO05D008824 4.6e-48 195.3 131 73.3
FAN25G3578 Fragaria x ananassa HOM05D006956 ORTHO05D008824 1.0e-47 194.1 132 71.2
AagrBONN_evm.TU.Sc2ySwM_368.712 Anthoceros agrestis HOM05D006956 ORTHO05D008824 1.1e-46 190.7 202 47.0
RcHm_v2.0_Chr5g0026311 Rosa chinensis HOM05D006956 ORTHO05D008824 9.6e-46 187.6 199 51.3
QL04p076191 Quercus lobata HOM05D006956 ORTHO05D008824 1.6e-45 186.8 128 70.3
QL93p0133_0021 Quercus lobata HOM05D006956 ORTHO05D008824 1.6e-45 186.8 128 70.3
Actinidia35432 Actinidia chinensis HOM05D006956 ORTHO05D008824 3.1e-44 182.6 141 66.0
Prupe.4G139100 Prunus persica HOM05D006956 ORTHO05D008824 2.6e-43 179.5 164 59.1
Pp3c4_6830 Physcomitrium patens HOM05D006956 ORTHO05D008824 3.2e-41 172.6 196 44.4
MD17G1180100 Malus domestica HOM05D006956 ORTHO05D008824 1.2e-40 170.6 126 67.5
SMO340G0149 Selaginella moellendorffii HOM05D006956 ORTHO05D008824 4.6e-40 168.7 191 41.9
Lsat_1_v5_gn_6_63040 Lactuca sativa HOM05D006956 ORTHO05D008824 7.9e-40 167.9 170 52.4
Pp3c4_6840 Physcomitrium patens HOM05D006956 ORTHO05D008824 3.3e-38 162.5 194 41.2
SEGI_37897 Sequoiadendron giganteum HOM05D006956 ORTHO05D008824 1.3e-37 160.6 129 56.6
Mapoly0023s0023 Marchantia polymorpha HOM05D006956 ORTHO05D008824 1.8e-31 140.2 127 51.2
vmacro22747 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 6.9e-28 128.3 176 44.3
FAN16G1261 Fragaria x ananassa HOM05D006956 ORTHO05D008824 5.9e-27 125.2 110 60.0
vmacro09782 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 4.2e-25 119.0 66 80.3
Potri.011G142501 Populus trichocarpa HOM05D006956 ORTHO05D008824 7.9e-24 114.8 92 62.0
Lju41A37T48 Lonicera japonica HOM05D006956 ORTHO05D008824 5.2e-23 112.1 78 65.4
ATR0753G159 Amborella trichopoda HOM05D006956 ORTHO05D008824 2.0e-22 110.2 92 59.8
Glyma.08G170300 Glycine max HOM05D006956 ORTHO05D008824 1.3e-21 107.5 158 41.1
MBI18_g44288_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 3.7e-21 105.9 70 70.0
RcHm_v2.0_Chr5g0031421 Rosa chinensis HOM05D006956 ORTHO05D008824 1.4e-20 104.0 108 54.6
Cre13.g575333 Chlamydomonas reinhardtii HOM05D006956 ORTHO05D008824 1.7e-18 97.1 151 37.1
MD05G1220700 Malus domestica HOM05D006956 ORTHO05D008824 1.5e-17 94.0 63 63.5
Lalb_Chr25g0284921 Lupinus albus HOM05D006956 ORTHO05D008824 4.0e-15 85.9 159 37.1
Cpa.g.sc67.70 Carica papaya HOM05D006956 ORTHO05D008824 1.8e-12 77.0 62 58.1
Lju41A37T47 Lonicera japonica HOM05D006956 ORTHO05D008824 8.5e-10 68.2 44 65.9
SHI21449 Sapria himalayana HOM05D000257 ORTHO05D008466 3.6e-08 62.8 41 65.9
MCO02G468 Micromonas commoda HOM05D006956 ORTHO05D008824 4.7e-08 62.4 85 41.2
Cre08.g380400 Chlamydomonas reinhardtii HOM05D004675 ORTHO05D005631 1.4e-07 60.8 173 20.2
AagrBONN_evm.TU.Sc2ySwM_228.148 Anthoceros agrestis HOM05D004675 ORTHO05D005631 4.0e-07 59.3 164 26.2
SMO201G0213 Selaginella moellendorffii HOM05D004675 ORTHO05D005631 4.4e-06 55.8 169 22.5
AagrBONN_evm.TU.Sc2ySwM_362.2804 Anthoceros agrestis HOM05D006956 ORTHO05D008824 7.5e-06 55.1 65 44.6
TPR.G22507 Trifolium pratense HOM05D006956 ORTHO05D008824 9.8e-06 54.7 32 75.0


User provided reference genes

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