Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G697.6 Capsicum annuum HOM05D005708 ORTHO05D007371 9.3e-93 344.0 235 100.0
CAN.G697.5 Capsicum annuum HOM05D005708 ORTHO05D007371 8.7e-91 337.4 235 97.4
Sopen09g006140 Solanum pennellii HOM05D005708 ORTHO05D007371 2.3e-75 286.2 254 63.4
PGSC0003DMG400024269 Solanum tuberosum HOM05D005708 ORTHO05D007371 1.1e-74 283.9 254 63.4
Solyc09g011410.4 Solanum lycopersicum HOM05D005708 ORTHO05D007371 3.3e-74 282.3 254 67.7
Nitab4.5_0010208g0010 Nicotiana tabacum HOM05D005708 ORTHO05D007371 5.1e-67 258.5 219 63.0
Peaxi162Scf00975g00005 Petunia axillaris HOM05D005708 ORTHO05D007371 6.7e-67 258.1 230 63.5
Nitab4.5_0000362g0180 Nicotiana tabacum HOM05D005708 ORTHO05D007371 1.1e-64 250.8 215 63.3
Cc06_g02100 Coffea canephora HOM05D005708 ORTHO05D007371 3.7e-41 172.6 121 69.4
PGR004G2501 Punica granatum HOM05D005708 ORTHO05D007371 1.6e-39 167.2 112 73.2
Dinv37119 Davidia involucrata HOM05D005708 ORTHO05D007371 3.5e-39 166.0 107 72.9
Nn2g13523 Nelumbo nucifera HOM05D005708 ORTHO05D007371 6.5e-38 161.8 92 81.5
DCAR_012138 Daucus carota HOM05D005708 ORTHO05D007371 8.5e-38 161.4 96 79.2
Migut.J00266 Erythranthe guttata HOM05D005708 ORTHO05D007371 1.1e-37 161.0 238 42.9
Oeu001838.1 Olea europaea HOM05D005708 ORTHO05D007371 1.1e-37 161.0 232 44.0
TWI74G0123 Tripterygium wilfordii HOM05D005708 ORTHO05D007371 2.5e-37 159.8 114 69.3
CDE12G0309 Ceratophyllum demersum HOM05D005708 ORTHO05D007371 3.2e-37 159.5 109 70.6
Lj3g0017501 Lotus japonicus HOM05D005708 ORTHO05D007371 3.2e-37 159.5 109 73.4
Hma1.2p1_0671F.1_g200540 Hydrangea macrophylla HOM05D005708 ORTHO05D007371 4.2e-37 159.1 91 80.2
Lsat_1_v5_gn_8_84160 Lactuca sativa HOM05D005708 ORTHO05D007371 7.2e-37 158.3 111 69.4
Potri.016G103600 Populus trichocarpa HOM05D005708 ORTHO05D007371 7.2e-37 158.3 108 71.3
MSTRG.19053 Avicennia marina HOM05D005708 ORTHO05D007371 9.4e-37 157.9 123 63.4
Lalb_Chr12g0210271 Lupinus albus HOM05D005708 ORTHO05D007371 9.4e-37 157.9 115 69.6
Manes.08G082000 Manihot esculenta HOM05D005708 ORTHO05D007371 1.2e-36 157.5 87 80.5
SalBow5G2115 Salvia bowleyana HOM05D005708 ORTHO05D007371 1.2e-36 157.5 234 44.0
Actinidia13818 Actinidia chinensis HOM05D005708 ORTHO05D007371 2.1e-36 156.8 108 68.5
Lj2C65T6 Lonicera japonica HOM05D005708 ORTHO05D007371 2.1e-36 156.8 87 81.6
Lalb_Chr12g0210311 Lupinus albus HOM05D005708 ORTHO05D007371 2.1e-36 156.8 90 82.2
unitig_749.g14179 Utricularia gibba HOM05D005708 ORTHO05D007371 2.7e-36 156.4 108 69.4
Atru.chr8.2087 Acer truncatum HOM05D005708 ORTHO05D007371 3.6e-36 156.0 85 83.5
Gohir.D09G148300 Gossypium hirsutum HOM05D005708 ORTHO05D007371 3.6e-36 156.0 110 72.7
Gorai.006G169300 Gossypium raimondii HOM05D005708 ORTHO05D007371 3.6e-36 156.0 110 72.7
HanXRQChr04g0124491 Helianthus annuus HOM05D005708 ORTHO05D007371 3.6e-36 156.0 111 69.4
TAR636G0567 Trochodendron aralioides HOM05D005708 ORTHO05D007371 3.6e-36 156.0 95 74.7
Cfa017304 Carpinus fangiana HOM05D005708 ORTHO05D007371 4.7e-36 155.6 114 68.4
ECA247G1035 Erigeron canadensis HOM05D005708 ORTHO05D007371 4.7e-36 155.6 100 76.0
Cpa.g.sc1380.1 Carica papaya HOM05D005708 ORTHO05D007371 6.1e-36 155.2 91 76.9
Ciclev10012647m.g Citrus clementina HOM05D005708 ORTHO05D007371 8.0e-36 154.8 111 67.6
Actinidia29170 Actinidia chinensis HOM05D005708 ORTHO05D007371 1.0e-35 154.5 108 66.7
MSTRG.5629 Avicennia marina HOM05D005708 ORTHO05D007371 1.0e-35 154.5 87 81.6
Haze_20879 Corylus avellana HOM05D005708 ORTHO05D007371 1.0e-35 154.5 114 67.5
Haze_20888 Corylus avellana HOM05D005708 ORTHO05D007371 1.0e-35 154.5 114 67.5
Gohir.A09G152600 Gossypium hirsutum HOM05D005708 ORTHO05D007371 1.0e-35 154.5 108 73.1
vmacro20194 Vaccinium macrocarpon HOM05D005708 ORTHO05D007371 1.0e-35 154.5 91 79.1
Potri.006G092100 Populus trichocarpa HOM05D005708 ORTHO05D007371 1.4e-35 154.1 241 39.4
EL10Ac7g16173 Beta vulgaris HOM05D005708 ORTHO05D007371 2.3e-35 153.3 120 66.7
TAR633G0733 Trochodendron aralioides HOM05D005708 ORTHO05D007371 2.3e-35 153.3 92 76.1
CARHR132460 Cardamine hirsuta HOM05D005708 ORTHO05D007371 4.0e-35 152.5 115 61.7
PSO700G0359 Papaver somniferum HOM05D005708 ORTHO05D007371 5.2e-35 152.1 119 65.5
Thecc.05G029500 Theobroma cacao HOM05D005708 ORTHO05D007371 5.2e-35 152.1 107 71.0
CsaV3_4G025560 Cucumis sativus L. HOM05D005708 ORTHO05D007371 6.8e-35 151.8 107 67.3
Rhsim05G0199400 Rhododendron simsii HOM05D005708 ORTHO05D007371 6.8e-35 151.8 91 76.9
CANSAT35G1568 Cannabis sativa HOM05D005708 ORTHO05D007371 8.8e-35 151.4 89 80.9
Carub.0004s1982 Capsella rubella HOM05D005708 ORTHO05D007371 8.8e-35 151.4 91 75.8
Duzib106G0627 Durio zibethinus HOM05D005708 ORTHO05D007371 8.8e-35 151.4 84 85.7
Psat4g216560 Pisum sativum HOM05D005708 ORTHO05D007371 8.8e-35 151.4 90 78.9
COL.COLO4_14700 Corchorus olitorius HOM05D005708 ORTHO05D007371 1.2e-34 151.0 109 67.9
ClCG04G007670 Citrullus lanatus HOM05D005708 ORTHO05D007371 1.5e-34 150.6 244 40.2
MD12G1154300 Malus domestica HOM05D005708 ORTHO05D007371 2.0e-34 150.2 110 67.3
PSO170G4411 Papaver somniferum HOM05D005708 ORTHO05D007371 2.0e-34 150.2 119 62.2
THA.LOC104823402 Tarenaya hassleriana HOM05D005708 ORTHO05D007371 2.6e-34 149.8 107 67.3
TAR365G0212 Trochodendron aralioides HOM05D005708 ORTHO05D007371 2.6e-34 149.8 92 73.9
CSS0015468 Camellia sinensis var. sinensis HOM05D005708 ORTHO05D007371 3.4e-34 149.4 110 69.1
MELO3C003181.2 Cucumis melo HOM05D005708 ORTHO05D007371 3.4e-34 149.4 107 67.3
Thhalv10017070m.g Eutrema salsugineum HOM05D005708 ORTHO05D007371 3.4e-34 149.4 130 58.5
Prupe.6G264200 Prunus persica HOM05D005708 ORTHO05D007371 3.4e-34 149.4 255 40.4
ATR1089G112 Amborella trichopoda HOM05D005708 ORTHO05D007371 5.7e-34 148.7 120 62.5
CDE04G3753 Ceratophyllum demersum HOM05D005708 ORTHO05D007371 5.7e-34 148.7 89 76.4
Sabra06G0069700 Salix brachista HOM05D005708 ORTHO05D007371 7.5e-34 148.3 113 66.4
Sabra16G0103400 Salix brachista HOM05D005708 ORTHO05D007371 7.5e-34 148.3 107 69.2
SGA_v2.0_scaffold85G26813 Striga asiatica HOM05D005708 ORTHO05D007371 7.5e-34 148.3 106 67.0
AL4G34860 Arabidopsis lyrata HOM05D005708 ORTHO05D007371 9.8e-34 147.9 111 64.0
Ca_27721_v3 Cicer arietinum L. HOM05D005708 ORTHO05D007371 9.8e-34 147.9 90 78.9
RcHm_v2.0_Chr3g0464731 Rosa chinensis HOM05D005708 ORTHO05D007371 9.8e-34 147.9 101 68.3
Sed0002606 Sechium edule HOM05D005708 ORTHO05D007371 9.8e-34 147.9 122 60.7
arahy.Tifrunner.gnm1.ann1.B0LHRU Arachis hypogaea HOM05D005708 ORTHO05D007371 1.3e-33 147.5 109 66.1
arahy.Tifrunner.gnm1.ann1.QBKP7Q Arachis hypogaea HOM05D005708 ORTHO05D007371 1.3e-33 147.5 109 66.1
Ca_25882_v3 Cicer arietinum L. HOM05D002067 ORTHO05D007371 1.3e-33 147.5 84 82.1
TPR.G17369 Trifolium pratense HOM05D005708 ORTHO05D007371 1.3e-33 147.5 90 76.7
AT2G37920 Arabidopsis thaliana HOM05D005708 ORTHO05D007371 1.7e-33 147.1 99 70.7
FAN09G3204 Fragaria x ananassa HOM05D005708 ORTHO05D007371 1.7e-33 147.1 127 58.3
arahy.Tifrunner.gnm1.ann1.4YLV1I Arachis hypogaea HOM05D005708 ORTHO05D007371 2.2e-33 146.7 109 66.1
FAN05G0996 Fragaria x ananassa HOM05D005708 ORTHO05D007371 2.2e-33 146.7 127 57.5
AUR62033707 Chenopodium quinoa HOM05D005708 ORTHO05D007371 2.8e-33 146.4 116 65.5
Aa31sc78G80 Aethionema arabicum HOM05D005708 ORTHO05D007371 3.7e-33 146.0 87 77.0
MD04G1138600 Malus domestica HOM05D005708 ORTHO05D007371 3.7e-33 146.0 267 37.8
Phvul.010G039900 Phaseolus vulgaris HOM05D005708 ORTHO05D007371 3.7e-33 146.0 91 78.0
arahy.Tifrunner.gnm1.ann1.J1JT5X Arachis hypogaea HOM05D003039 ORTHO05D008410 4.8e-33 145.6 109 65.1
FvH4_6g12760 Fragaria vesca HOM05D005708 ORTHO05D007371 4.8e-33 145.6 127 58.3
QL07p028358 Quercus lobata HOM05D005708 ORTHO05D007371 4.8e-33 145.6 96 74.0
QL11p022898 Quercus lobata HOM05D005708 ORTHO05D007371 4.8e-33 145.6 96 74.0
Eucgr.B02727 Eucalyptus grandis HOM05D005708 ORTHO05D007371 6.3e-33 145.2 88 76.1
MBI06_g17069_MAGBIO Magnolia biondii HOM05D005708 ORTHO05D007371 6.3e-33 145.2 112 67.0
Sp4g20220 Schrenkiella parvula HOM05D005708 ORTHO05D007371 6.3e-33 145.2 84 78.6
CiPaw.10G149200 Carya illinoinensis HOM05D005708 ORTHO05D007371 1.1e-32 144.4 238 38.7
FAN14G3704 Fragaria x ananassa HOM05D005708 ORTHO05D007371 1.1e-32 144.4 127 58.3
Thhalv10023045m.g Eutrema salsugineum HOM05D005708 ORTHO05D007371 1.8e-32 143.7 96 69.8
AUR62036813 Chenopodium quinoa HOM05D005708 ORTHO05D007371 2.4e-32 143.3 104 68.3
Glyma.03G100000 Glycine max HOM05D005708 ORTHO05D007371 3.1e-32 142.9 93 73.1
Glyma.07G122500 Glycine max HOM05D005708 ORTHO05D007371 3.1e-32 142.9 93 73.1
VMungo0331G1050 Vigna mungo HOM05D005708 ORTHO05D007371 5.4e-32 142.1 91 75.8
Aqoxy7G03344 Aquilegia oxysepala HOM05D005708 ORTHO05D007371 7.0e-32 141.7 111 58.6
BcaB01g03740 Brassica carinata HOM05D005708 ORTHO05D007371 9.1e-32 141.4 84 76.2
BcaC01g05584 Brassica carinata HOM05D005708 ORTHO05D007371 9.1e-32 141.4 84 76.2
BolC3t14857H Brassica oleracea HOM05D005708 ORTHO05D007371 9.1e-32 141.4 84 76.2
COL.COLO4_14702 Corchorus olitorius HOM05D005708 ORTHO05D007371 9.1e-32 141.4 109 65.1
A03p20950 Brassica napus HOM05D005708 ORTHO05D007371 1.6e-31 140.6 113 61.1
BraA03t11334Z Brassica rapa HOM05D005708 ORTHO05D007371 1.6e-31 140.6 113 61.1
C03p24610 Brassica napus HOM05D005708 ORTHO05D007371 5.9e-31 138.7 84 75.0
Sc01g0004810 Simmondsia chinensis HOM05D005708 ORTHO05D007371 9.5e-29 131.3 101 68.3
RcHm_v2.0_Chr4g0392921 Rosa chinensis HOM05D005708 ORTHO05D007371 6.8e-27 125.2 111 55.0
HPP92_005607 Vanilla planifolia HOM05D005708 ORTHO05D007371 1.3e-25 120.9 113 53.1
Os02g0564300 Oryza sativa ssp. japonica HOM05D005708 ORTHO05D007371 1.0e-22 111.3 122 47.5
Thhalv10010999m.g Eutrema salsugineum HOM05D005708 ORTHO05D007371 1.5e-21 107.5 69 71.0
Thhalv10000504m.g Eutrema salsugineum HOM05D005708 ORTHO05D007371 2.1e-20 103.6 69 68.1
Zm00001eb244220 Zea mays HOM05D005708 ORTHO05D007371 1.0e-19 101.3 123 45.5
DCAR_017462 Daucus carota HOM05D005708 ORTHO05D007371 2.3e-19 100.1 105 52.4
RcHm_v2.0_Chr2g0112341 Rosa chinensis HOM05D005708 ORTHO05D007371 5.2e-19 99.0 62 67.7
SEGI_02447 Sequoiadendron giganteum HOM05D005708 ORTHO05D007371 1.3e-17 94.4 90 54.4
FAN02G3647 Fragaria x ananassa HOM05D005708 ORTHO05D007371 9.2e-16 88.2 51 80.4
Thhalv10005406m.g Eutrema salsugineum HOM05D005708 ORTHO05D007371 1.5e-13 80.9 51 74.5
Duzib093G1880 Durio zibethinus HOM05D005708 ORTHO05D007371 2.5e-13 80.1 47 80.9
Thhalv10024002m.g Eutrema salsugineum HOM05D005708 ORTHO05D007371 4.9e-09 65.9 65 53.8
Thhalv10024146m.g Eutrema salsugineum HOM05D005708 ORTHO05D007371 4.9e-09 65.9 65 53.8
Thhalv10027476m.g Eutrema salsugineum HOM05D005708 ORTHO05D007371 2.0e-07 60.5 65 50.8
Sabra15G0072900 Salix brachista HOM05D001236 ORTHO05D001090 2.7e-07 60.1 56 48.2
SMO308G0022 Selaginella moellendorffii HOM05D005708 ORTHO05D007371 3.5e-07 59.7 57 50.9
Sabra15G0069200 Salix brachista HOM05D001236 ORTHO05D001090 7.8e-07 58.5 36 63.9
Aa31LG2G700 Aethionema arabicum HOM05D000032 ORTHO05D002227 6.6e-06 55.5 82 37.8
Dinv22029 Davidia involucrata HOM05D005708 ORTHO05D007371 6.6e-06 55.5 37 70.3
Mapoly0076s0020 Marchantia polymorpha HOM05D000032 ORTHO05D002227 8.6e-06 55.1 76 40.8


User provided reference genes

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