Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G692.2 Capsicum annuum HOM05D009195 ORTHO05D000137 2.7e-64 248.4 121 100.0
CAN.G897.8 Capsicum annuum HOM05D009195 ORTHO05D000137 3.5e-51 204.9 119 84.0
CAN.G1200.1 Capsicum annuum HOM05D009195 ORTHO05D000137 3.5e-43 178.3 113 75.2
CAN.G50.5 Capsicum annuum HOM05D009195 ORTHO05D000137 3.6e-40 168.3 112 72.3
CAN.G197.8 Capsicum annuum HOM05D000644 ORTHO05D000137 2.2e-37 159.1 99 78.8
CAN.G242.13 Capsicum annuum HOM05D009195 ORTHO05D000137 8.3e-37 157.1 89 80.9
CAN.G1071.1 Capsicum annuum HOM05D009195 ORTHO05D000137 5.9e-35 151.0 91 78.0
CAN.G75.5 Capsicum annuum HOM05D009195 ORTHO05D000137 3.8e-34 148.3 103 71.8
CAN.G1568.2 Capsicum annuum HOM05D009195 ORTHO05D000137 1.2e-27 126.7 67 85.1
CAN.G139.5 Capsicum annuum HOM05D009195 ORTHO05D000137 1.3e-26 123.2 68 82.4
CAN.G58.24 Capsicum annuum HOM05D009195 ORTHO05D000137 2.3e-26 122.5 66 84.8
CAN.G977.6 Capsicum annuum HOM05D009195 ORTHO05D000137 2.3e-26 122.5 67 82.1
CAN.G1139.12 Capsicum annuum HOM05D009195 ORTHO05D000137 3.9e-26 121.7 67 82.1
CAN.G1105.1 Capsicum annuum HOM05D009195 ORTHO05D000137 1.9e-25 119.4 67 82.1
CAN.G468.1 Capsicum annuum HOM05D009195 ORTHO05D000137 4.3e-25 118.2 72 76.4
CAN.G998.1 Capsicum annuum HOM05D009195 ORTHO05D000137 3.6e-24 115.2 67 77.6
CAN.G39.19 Capsicum annuum HOM05D009195 ORTHO05D000137 4.7e-24 114.8 61 85.2
CAN.G175.20 Capsicum annuum HOM05D009195 ORTHO05D000137 6.2e-24 114.4 62 83.9
CAN.G1049.8 Capsicum annuum HOM05D009195 ORTHO05D000137 6.8e-23 110.9 62 80.6
CAN.G459.4 Capsicum annuum HOM05D009195 ORTHO05D000137 5.8e-22 107.8 62 80.6
CAN.G209.15 Capsicum annuum HOM05D000644 ORTHO05D000137 2.7e-19 99.0 70 71.4
CAN.G78.23 Capsicum annuum HOM05D009195 ORTHO05D000137 5.6e-17 91.3 53 84.9
CAN.G763.3 Capsicum annuum HOM05D009195 ORTHO05D000137 1.2e-16 90.1 114 48.2
CAN.G1385.3 Capsicum annuum HOM05D009195 ORTHO05D000137 2.3e-15 85.9 52 82.7
Nitab4.5_0001684g0060 Nicotiana tabacum HOM05D005877 ORTHO05D010356 5.8e-14 81.3 98 45.9
CANSAT11G1718 Cannabis sativa HOM05D009472 ORTHO05D000137 3.5e-11 72.0 88 45.5
Nitab4.5_0002694g0040 Nicotiana tabacum HOM05D005877 ORTHO05D010356 4.6e-11 71.6 69 55.1
Nitab4.5_0014640g0020 Nicotiana tabacum HOM05D005877 ORTHO05D010356 6.0e-11 71.2 85 48.2
Nitab4.5_0006617g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000137 2.5e-09 65.9 109 32.1
CAN.G353.18 Capsicum annuum HOM05D009195 ORTHO05D000137 3.3e-09 65.5 38 76.3
CAN.G897.6 Capsicum annuum HOM05D000644 ORTHO05D000137 1.6e-08 63.2 44 65.9
SGA_v2.0_scaffold276G46661 Striga asiatica HOM05D000679 ORTHO05D000137 2.1e-08 62.8 117 35.0
SGA_v2.0_scaffold126G33830 Striga asiatica HOM05D000679 ORTHO05D000137 4.7e-08 61.6 118 34.7
SGA_v2.0_scaffold59G20643 Striga asiatica HOM05D000679 ORTHO05D000137 4.7e-08 61.6 118 34.7
SGA_v2.0_scaffold11G05593 Striga asiatica HOM05D002262 ORTHO05D000482 6.2e-08 61.2 93 36.6
SGA_v2.0_scaffold178G39480 Striga asiatica HOM05D002262 ORTHO05D000137 1.1e-07 60.5 118 33.1
CAN.G326.5 Capsicum annuum HOM05D009195 ORTHO05D016873 1.4e-07 60.1 33 81.8
Nitab4.5_0001725g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000137 1.4e-07 60.1 93 34.4
Nitab4.5_0002329g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.4e-07 60.1 101 33.7
Nitab4.5_0018223g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.4e-07 60.1 101 29.7
Solyc10g076970.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 1.8e-07 59.7 88 34.1
Sopen00g010790 Solanum pennellii HOM05D000679 ORTHO05D000137 1.8e-07 59.7 88 34.1
CAN.G77.20 Capsicum annuum HOM05D005063 ORTHO05D000137 2.3e-07 59.3 99 34.3
Nitab4.5_0003392g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000137 4.0e-07 58.5 91 36.3
Sopen03g006990 Solanum pennellii HOM05D000679 ORTHO05D000137 4.0e-07 58.5 88 33.0
Solyc03g034332.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 5.2e-07 58.2 88 33.0
SGA_v2.0_scaffold2471G54126 Striga asiatica HOM05D000679 ORTHO05D000137 5.2e-07 58.2 111 27.9
Nitab4.5_0000839g0190 Nicotiana tabacum HOM05D002262 ORTHO05D000482 6.8e-07 57.8 113 31.0
CAN.G1344.11 Capsicum annuum HOM05D000679 ORTHO05D000482 1.2e-06 57.0 85 35.3
SGA_v2.0_scaffold76G25157 Striga asiatica HOM05D002262 ORTHO05D000137 1.2e-06 57.0 101 35.6
CANSAT01G1142 Cannabis sativa HOM05D009472 ORTHO05D000482 1.5e-06 56.6 82 36.6
Solyc05g150115.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 2.0e-06 56.2 88 34.1
CANSAT54G1268 Cannabis sativa HOM05D008897 ORTHO05D000137 2.6e-06 55.8 108 26.9
Nitab4.5_0016795g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.6e-06 55.8 88 33.0
Solyc01g066915.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 2.6e-06 55.8 88 33.0
Solyc08g044337.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 2.6e-06 55.8 88 33.0
Sopen06g003040 Solanum pennellii HOM05D000679 ORTHO05D000137 2.6e-06 55.8 88 33.0
Sopen09g026450 Solanum pennellii HOM05D000679 ORTHO05D000137 2.6e-06 55.8 88 33.0
Sopen12g007430 Solanum pennellii HOM05D000679 ORTHO05D000137 2.6e-06 55.8 88 33.0
CANSAT56G1481 Cannabis sativa HOM05D009472 ORTHO05D000482 3.4e-06 55.5 82 37.8
Nitab4.5_0000902g0220 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.4e-06 55.5 96 33.3
Nitab4.5_0001047g0090 Nicotiana tabacum HOM05D006812 ORTHO05D012242 3.4e-06 55.5 109 28.4
Solyc07g008677.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 3.4e-06 55.5 88 33.0
CANSAT11G0653 Cannabis sativa HOM05D009472 ORTHO05D000137 4.4e-06 55.1 82 35.4
CANSAT21G0269 Cannabis sativa HOM05D009472 ORTHO05D000137 4.4e-06 55.1 82 35.4
CANSAT54G2383 Cannabis sativa HOM05D009472 ORTHO05D000137 4.4e-06 55.1 82 35.4
CANSAT78G0078 Cannabis sativa HOM05D009472 ORTHO05D000137 4.4e-06 55.1 82 35.4
CANSAT80G2627 Cannabis sativa HOM05D009472 ORTHO05D000137 4.4e-06 55.1 82 35.4
Sopen06g011260 Solanum pennellii HOM05D000679 ORTHO05D000137 5.8e-06 54.7 88 34.1
CANSAT54G2657 Cannabis sativa HOM05D009472 ORTHO05D000137 7.6e-06 54.3 80 36.2
Nitab4.5_0002497g0020 Nicotiana tabacum HOM05D005877 ORTHO05D010356 9.9e-06 53.9 59 50.8


User provided reference genes

Program Settings