Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G691.4 Capsicum annuum HOM05D005365 ORTHO05D006910 3.0e-131 471.9 238 100.0
CAN.G222.54 Capsicum annuum HOM05D005365 ORTHO05D006910 6.5e-102 374.4 300 70.0
Sopen11g006160 Solanum pennellii HOM05D005365 ORTHO05D006910 1.2e-95 353.6 296 67.6
Solyc11g011370.2 Solanum lycopersicum HOM05D005365 ORTHO05D006910 1.3e-94 350.1 296 66.6
PGSC0003DMG400013306 Solanum tuberosum HOM05D005365 ORTHO05D006910 2.2e-94 349.4 296 66.6
Peaxi162Scf00562g00038 Petunia axillaris HOM05D005365 ORTHO05D006910 6.7e-91 337.8 301 64.5
Nitab4.5_0012785g0010 Nicotiana tabacum HOM05D005365 ORTHO05D006910 1.9e-85 319.7 243 73.3
Nitab4.5_0000201g0010 Nicotiana tabacum HOM05D005365 ORTHO05D006910 7.2e-85 317.8 246 72.4
Dinv19044 Davidia involucrata HOM05D005365 ORTHO05D006910 9.5e-69 264.2 310 51.0
Actinidia06487 Actinidia chinensis HOM05D005365 ORTHO05D006910 8.0e-68 261.2 302 52.3
Lj2C520T1 Lonicera japonica HOM05D005365 ORTHO05D006910 1.4e-67 260.4 302 50.7
GSVIVG01014028001 Vitis vinifera HOM05D005365 ORTHO05D006910 2.3e-67 259.6 302 50.7
Cfa007794 Carpinus fangiana HOM05D005365 ORTHO05D006910 6.8e-67 258.1 300 51.3
Gohir.D11G174900 Gossypium hirsutum HOM05D005365 ORTHO05D006910 1.5e-66 256.9 300 50.7
Thecc.04G055200 Theobroma cacao HOM05D005365 ORTHO05D006910 2.0e-66 256.5 300 50.3
Actinidia17204 Actinidia chinensis HOM05D005365 ORTHO05D006910 3.4e-66 255.8 302 51.0
CSS0031268 Camellia sinensis var. sinensis HOM05D005365 ORTHO05D006910 3.4e-66 255.8 302 50.0
Hma1.2p1_1583F.1_g291990 Hydrangea macrophylla HOM05D005365 ORTHO05D006910 3.4e-66 255.8 305 50.5
TAR374G0610 Trochodendron aralioides HOM05D005365 ORTHO05D006910 4.4e-66 255.4 301 50.8
QL02p059099 Quercus lobata HOM05D005365 ORTHO05D006910 2.2e-65 253.1 300 49.3
Gorai.007G187500 Gossypium raimondii HOM05D005365 ORTHO05D006910 3.7e-65 252.3 300 50.3
Potri.004G085500 Populus trichocarpa HOM05D005365 ORTHO05D006910 3.7e-65 252.3 300 52.0
CANSAT80G2352 Cannabis sativa HOM05D005365 ORTHO05D006910 8.3e-65 251.1 227 61.7
Duzib133G0311 Durio zibethinus HOM05D005365 ORTHO05D006910 8.3e-65 251.1 300 50.3
TWI77G0914 Tripterygium wilfordii HOM05D005365 ORTHO05D006910 1.1e-64 250.8 300 50.0
Manes.03G027200 Manihot esculenta HOM05D005365 ORTHO05D006910 1.4e-64 250.4 298 50.7
Prupe.3G017700 Prunus persica HOM05D005365 ORTHO05D006910 5.4e-64 248.4 295 49.8
Atru.chr1.1986 Acer truncatum HOM05D005365 ORTHO05D006910 1.6e-63 246.9 297 48.5
Cpa.g.sc116.71 Carica papaya HOM05D005365 ORTHO05D006910 1.6e-63 246.9 300 49.3
Cc07_g13300 Coffea canephora HOM05D005365 ORTHO05D006910 5.9e-63 245.0 298 50.7
Lsat_1_v5_gn_2_68700 Lactuca sativa HOM05D005365 ORTHO05D006910 2.3e-62 243.0 291 49.8
Nn4g24353 Nelumbo nucifera HOM05D005365 ORTHO05D006910 5.0e-62 241.9 301 48.2
MD09G1270700 Malus domestica HOM05D005365 ORTHO05D006910 8.6e-62 241.1 295 48.5
ECA238G2923 Erigeron canadensis HOM05D005365 ORTHO05D006910 1.1e-61 240.7 294 49.0
MSTRG.15661 Avicennia marina HOM05D005365 ORTHO05D006910 1.5e-61 240.4 298 49.0
PSO478G2448 Papaver somniferum HOM05D005365 ORTHO05D006910 2.5e-61 239.6 296 48.0
EL10Ac2g03189 Beta vulgaris HOM05D005365 ORTHO05D006910 3.3e-61 239.2 297 48.8
PSO017G3744 Papaver somniferum HOM05D005365 ORTHO05D006910 5.6e-61 238.4 296 47.6
SGA_v2.0_scaffold45G17160 Striga asiatica HOM05D005365 ORTHO05D006910 7.3e-61 238.0 298 48.3
MD17G1268900 Malus domestica HOM05D005365 ORTHO05D006910 2.8e-60 236.1 240 55.4
AUR62018225 Chenopodium quinoa HOM05D005365 ORTHO05D006910 4.7e-60 235.3 296 48.3
AUR62037789 Chenopodium quinoa HOM05D005365 ORTHO05D006910 8.0e-60 234.6 296 48.3
Haze_14277 Corylus avellana HOM05D005365 ORTHO05D006910 1.4e-59 233.8 300 47.7
CARHR215230 Cardamine hirsuta HOM05D005365 ORTHO05D006910 2.3e-59 233.0 297 46.5
Aa31LG9G17470 Aethionema arabicum HOM05D005365 ORTHO05D006910 3.1e-59 232.6 296 46.6
Lj6g0003323 Lotus japonicus HOM05D005365 ORTHO05D006910 6.8e-59 231.5 299 45.8
Ciclev10010965m.g Citrus clementina HOM05D005365 ORTHO05D006910 8.9e-59 231.1 245 52.2
Aqoxy2G03929 Aquilegia oxysepala HOM05D005365 ORTHO05D006910 1.2e-58 230.7 305 44.6
Lalb_Chr15g0084951 Lupinus albus HOM05D005365 ORTHO05D006910 1.5e-58 230.3 299 47.5
Carub.0007s3279 Capsella rubella HOM05D005365 ORTHO05D006910 3.4e-58 229.2 299 45.5
BcaB06g27110 Brassica carinata HOM05D005365 ORTHO05D006910 4.4e-58 228.8 291 47.8
A04p10780 Brassica napus HOM05D005365 ORTHO05D006910 5.8e-58 228.4 291 48.1
BraA04t16742Z Brassica rapa HOM05D005365 ORTHO05D006910 5.8e-58 228.4 291 48.1
FAN26G1336 Fragaria x ananassa HOM05D005365 ORTHO05D006910 7.5e-58 228.0 269 51.3
MELO3C022831.2 Cucumis melo HOM05D005365 ORTHO05D006910 9.8e-58 227.6 306 45.1
ClCG03G008820 Citrullus lanatus HOM05D005365 ORTHO05D006910 1.3e-57 227.3 306 45.8
Phvul.001G229600 Phaseolus vulgaris HOM05D005365 ORTHO05D006910 2.2e-57 226.5 299 46.5
Thhalv10027629m.g Eutrema salsugineum HOM05D005365 ORTHO05D006910 2.9e-57 226.1 290 46.2
vmacro07709 Vaccinium macrocarpon HOM05D005365 ORTHO05D006910 2.9e-57 226.1 303 47.5
arahy.Tifrunner.gnm1.ann1.WJY350 Arachis hypogaea HOM05D005365 ORTHO05D006910 4.9e-57 225.3 310 45.8
PGR004G1341 Punica granatum HOM05D005365 ORTHO05D006910 4.9e-57 225.3 297 47.5
Thhalv10027679m.g Eutrema salsugineum HOM05D005365 ORTHO05D006910 6.4e-57 224.9 291 47.1
Sp7g04480 Schrenkiella parvula HOM05D005365 ORTHO05D006910 6.4e-57 224.9 294 46.3
VMungo1383G2900 Vigna mungo HOM05D005365 ORTHO05D006910 8.3e-57 224.6 299 45.2
Medtr3g065300 Medicago truncatula HOM05D005365 ORTHO05D006910 1.1e-56 224.2 301 45.2
AL7G46400 Arabidopsis lyrata HOM05D005365 ORTHO05D006910 1.4e-56 223.8 300 44.7
BcaC02g09592 Brassica carinata HOM05D005365 ORTHO05D006910 1.9e-56 223.4 291 46.4
arahy.Tifrunner.gnm1.ann1.MH7SY7 Arachis hypogaea HOM05D005365 ORTHO05D006910 3.2e-56 222.6 310 45.5
Glyma.11G215600 Glycine max HOM05D005365 ORTHO05D006910 3.2e-56 222.6 299 44.8
C04p44500 Brassica napus HOM05D005365 ORTHO05D006910 4.1e-56 222.2 291 46.4
BolC4t26020H Brassica oleracea HOM05D005365 ORTHO05D006910 4.1e-56 222.2 291 46.4
Glyma.18G041000 Glycine max HOM05D005365 ORTHO05D006910 7.0e-56 221.5 299 44.8
Psat5g120520 Pisum sativum HOM05D005365 ORTHO05D006910 7.0e-56 221.5 301 44.2
CsaV3_5G023940 Cucumis sativus L. HOM05D005365 ORTHO05D006910 9.2e-56 221.1 306 44.1
AT5G37630 Arabidopsis thaliana HOM05D005365 ORTHO05D006910 1.6e-55 220.3 300 44.0
RcHm_v2.0_Chr3g0491161 Rosa chinensis HOM05D005365 ORTHO05D006910 1.7e-54 216.9 244 53.7
Ca_17092_v3 Cicer arietinum L. HOM05D005365 ORTHO05D006910 3.9e-54 215.7 251 51.0
Ca_17099_v3 Cicer arietinum L. HOM05D005365 ORTHO05D006910 3.9e-54 215.7 251 51.0
unitig_0.g2645 Utricularia gibba HOM05D005365 ORTHO05D006910 1.1e-53 214.2 300 43.7
CiPaw.03G073200 Carya illinoinensis HOM05D005365 ORTHO05D006910 4.3e-53 212.2 297 46.8
Eucgr.F02871 Eucalyptus grandis HOM05D005365 ORTHO05D006910 3.1e-51 206.1 229 52.0
Sabra04G0056600 Salix brachista HOM05D005365 ORTHO05D006910 4.0e-51 205.7 300 45.0
ATR0753G168 Amborella trichopoda HOM05D005365 ORTHO05D006910 6.8e-51 204.9 244 47.1
DCAR_028454 Daucus carota HOM05D005365 ORTHO05D006910 8.9e-51 204.5 301 44.2
MBI19_g22067_MAGBIO Magnolia biondii HOM05D005365 ORTHO05D006910 8.9e-51 204.5 307 42.7
Zm00001eb379890 Zea mays HOM05D005365 ORTHO05D006910 1.2e-50 204.1 298 43.0
Os06g0256000 Oryza sativa ssp. japonica HOM05D005365 ORTHO05D006910 4.4e-50 202.2 243 47.3
SEGI_16018 Sequoiadendron giganteum HOM05D005365 ORTHO05D006910 4.6e-47 192.2 254 43.7
CSS0046739 Camellia sinensis var. sinensis HOM05D005365 ORTHO05D006910 1.3e-46 190.7 302 41.1
GSVIVG01038363001 Vitis vinifera HOM05D005365 ORTHO05D006910 1.3e-46 190.7 245 47.3
Migut.K00918 Erythranthe guttata HOM05D005365 ORTHO05D006910 1.7e-46 190.3 226 50.0
Hund13093 Selenicereus undatus HOM05D005365 ORTHO05D006910 3.0e-46 189.5 243 48.1
FAN19G1822 Fragaria x ananassa HOM05D005365 ORTHO05D006910 6.2e-44 181.8 160 61.2
SGA_v2.0_scaffold45G17195 Striga asiatica HOM05D005365 ORTHO05D006910 2.2e-41 173.3 181 55.2
THA.LOC104805627 Tarenaya hassleriana HOM05D005365 ORTHO05D006910 3.3e-37 159.5 201 48.3
CDE05G1264 Ceratophyllum demersum HOM05D005365 ORTHO05D006910 9.5e-37 157.9 186 48.4
Oeu012492.1 Olea europaea HOM05D005365 ORTHO05D006910 2.1e-36 156.8 148 59.5
Ah.10g032430 Amaranthus hybridus HOM05D005365 ORTHO05D006910 7.1e-32 141.7 121 61.2
SMO367G0263 Selaginella moellendorffii HOM05D005365 ORTHO05D006910 3.5e-31 139.4 219 40.2
COL.COLO4_13431 Corchorus olitorius HOM05D005365 ORTHO05D006910 6.2e-28 128.6 151 48.3
Pp3c22_14670 Physcomitrium patens HOM05D005365 ORTHO05D006910 1.1e-27 127.9 217 40.1
TPR.G674 Trifolium pratense HOM05D005365 ORTHO05D006910 2.0e-26 123.6 141 51.1
Mapoly0032s0119 Marchantia polymorpha HOM05D005365 ORTHO05D006910 5.8e-26 122.1 230 34.3
FvH4_1g30230 Fragaria vesca HOM05D005365 ORTHO05D006910 1.9e-21 107.1 95 60.0
FAN23G0266 Fragaria x ananassa HOM05D005365 ORTHO05D006910 5.6e-21 105.5 95 58.9
Sc11g0004580 Simmondsia chinensis HOM05D005365 ORTHO05D006910 5.6e-21 105.5 148 43.9
HPP92_006139 Vanilla planifolia HOM05D005365 ORTHO05D006910 1.3e-20 104.4 137 47.4
AagrBONN_evm.TU.Sc2ySwM_228.4009 Anthoceros agrestis HOM05D005365 ORTHO05D006910 2.0e-18 97.1 219 33.3
TPR.G24911 Trifolium pratense HOM05D005365 ORTHO05D006910 2.2e-17 93.6 94 52.1
Sed0006074 Sechium edule HOM05D005365 ORTHO05D006910 3.8e-17 92.8 94 55.3
Gohir.A11G168700 Gossypium hirsutum HOM05D005365 ORTHO05D006910 4.2e-16 89.4 138 39.1
CBR_g39392 Chara braunii HOM05D000019 ORTHO05D000048 3.5e-15 86.3 267 25.8


User provided reference genes

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