Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G691.2 Capsicum annuum HOM05D005746 ORTHO05D007105 5.7e-147 524.2 266 100.0
CAN.G1205.1 Capsicum annuum HOM05D005746 ORTHO05D007105 1.0e-119 433.7 301 77.7
Sopen03g014980 Solanum pennellii HOM05D005746 ORTHO05D007105 1.2e-107 393.7 301 70.4
Solyc03g062650.3 Solanum lycopersicum HOM05D005746 ORTHO05D007105 2.2e-106 389.4 301 69.4
Nitab4.5_0002923g0020 Nicotiana tabacum HOM05D005746 ORTHO05D007105 4.6e-96 355.1 304 63.8
CAN.G525.35 Capsicum annuum HOM05D005746 ORTHO05D007105 4.0e-92 342.0 209 85.2
CAN.G284.10 Capsicum annuum HOM05D005746 ORTHO05D007105 1.2e-91 340.5 303 64.0
Peaxi162Scf00451g00821 Petunia axillaris HOM05D005746 ORTHO05D007105 7.5e-91 337.8 305 61.6
Cc07_g03290 Coffea canephora HOM05D005746 ORTHO05D007105 8.9e-84 314.3 304 56.6
Dinv33748 Davidia involucrata HOM05D005746 ORTHO05D007105 7.5e-83 311.2 314 53.5
Oeu060938.1 Olea europaea HOM05D005746 ORTHO05D007105 1.4e-81 307.0 311 53.7
CSS0009890 Camellia sinensis var. sinensis HOM05D005746 ORTHO05D007105 1.3e-79 300.4 314 52.9
CSS0043134 Camellia sinensis var. sinensis HOM05D005746 ORTHO05D007105 1.3e-79 300.4 314 52.9
Atru.chr8.140 Acer truncatum HOM05D005746 ORTHO05D007105 6.6e-79 298.1 311 50.2
SGA_v2.0_scaffold1G00328 Striga asiatica HOM05D005746 ORTHO05D007105 2.5e-78 296.2 309 53.4
Potri.004G128601 Populus trichocarpa HOM05D005746 ORTHO05D007105 8.1e-77 291.2 308 52.6
Lju41A18T48 Lonicera japonica HOM05D005746 ORTHO05D007105 1.8e-76 290.0 311 52.7
Migut.H00912 Erythranthe guttata HOM05D005746 ORTHO05D007105 2.4e-76 289.7 311 51.8
Eucgr.J01361 Eucalyptus grandis HOM05D005746 ORTHO05D007105 2.4e-76 289.7 305 50.5
Duzib147G0034 Durio zibethinus HOM05D005746 ORTHO05D007105 3.1e-76 289.3 306 50.3
Actinidia06086 Actinidia chinensis HOM05D005746 ORTHO05D007105 4.0e-76 288.9 314 51.6
Gorai.006G018000 Gossypium raimondii HOM05D005746 ORTHO05D007105 1.2e-75 287.3 307 49.8
vmacro05704 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 1.5e-75 287.0 316 50.0
Duzib147G0404 Durio zibethinus HOM05D005746 ORTHO05D007105 2.6e-75 286.2 306 50.3
Sabra04G0090500 Salix brachista HOM05D005746 ORTHO05D007105 2.6e-75 286.2 308 51.6
CAN.G697.12 Capsicum annuum HOM05D005746 ORTHO05D007105 3.4e-75 285.8 209 73.7
CiPaw.03G027900 Carya illinoinensis HOM05D005746 ORTHO05D007105 5.8e-75 285.0 306 50.0
vmacro17103 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 3.8e-74 282.3 316 49.4
Gohir.A09G017100 Gossypium hirsutum HOM05D005746 ORTHO05D007105 4.9e-74 282.0 307 48.9
COL.COLO4_33291 Corchorus olitorius HOM05D005746 ORTHO05D007105 2.4e-73 279.6 304 49.3
Cfa007537 Carpinus fangiana HOM05D005746 ORTHO05D007105 1.2e-72 277.3 305 50.2
Haze_14549 Corylus avellana HOM05D005746 ORTHO05D007105 7.8e-72 274.6 305 50.2
Sed0005323 Sechium edule HOM05D005746 ORTHO05D007105 7.8e-72 274.6 303 47.5
MSTRG.3234 Avicennia marina HOM05D005746 ORTHO05D007105 2.3e-71 273.1 311 49.8
CAN.G65.185 Capsicum annuum HOM05D005746 ORTHO05D007105 2.3e-71 273.1 270 62.2
Lsat_1_v5_gn_3_100801 Lactuca sativa HOM05D005746 ORTHO05D007105 3.0e-71 272.7 306 49.7
Hund15611 Selenicereus undatus HOM05D005746 ORTHO05D007105 3.0e-71 272.7 313 46.6
Ciclev10010889m.g Citrus clementina HOM05D005746 ORTHO05D007105 8.6e-71 271.2 312 48.1
ECA246G0262 Erigeron canadensis HOM05D005746 ORTHO05D007105 8.6e-71 271.2 298 49.7
HanXRQChr14g0439111 Helianthus annuus HOM05D005746 ORTHO05D007105 1.1e-70 270.8 301 50.8
TWI34G0228 Tripterygium wilfordii HOM05D005746 ORTHO05D007105 1.1e-70 270.8 307 50.2
DCAR_021658 Daucus carota HOM05D005746 ORTHO05D007105 1.9e-70 270.0 306 50.7
Rhsim10G0040100 Rhododendron simsii HOM05D005746 ORTHO05D007105 2.5e-70 269.6 327 45.9
QL02p081653 Quercus lobata HOM05D005746 ORTHO05D007105 3.3e-70 269.2 301 47.5
arahy.Tifrunner.gnm1.ann1.C4FZ3V Arachis hypogaea HOM05D005746 ORTHO05D007105 5.6e-70 268.5 315 49.2
Cpa.g.sc14.10 Carica papaya HOM05D005746 ORTHO05D007105 5.6e-70 268.5 309 48.2
PSO017G1620 Papaver somniferum HOM05D005746 ORTHO05D007105 5.6e-70 268.5 314 46.8
MD09G1049900 Malus domestica HOM05D005746 ORTHO05D007105 9.6e-70 267.7 319 48.3
MD17G1050300 Malus domestica HOM05D005746 ORTHO05D007105 9.6e-70 267.7 314 47.1
arahy.Tifrunner.gnm1.ann1.IK9RDG Arachis hypogaea HOM05D005746 ORTHO05D007105 1.2e-69 267.3 315 48.9
THA.LOC104823176 Tarenaya hassleriana HOM05D005746 ORTHO05D007105 1.1e-68 264.2 306 48.0
Sc14g0005950 Simmondsia chinensis HOM05D005746 ORTHO05D007105 2.4e-68 263.1 315 46.7
MELO3C009878.2 Cucumis melo HOM05D005746 ORTHO05D007105 3.1e-68 262.7 303 46.9
FvH4_6g48870 Fragaria vesca HOM05D005746 ORTHO05D007105 5.2e-68 261.9 301 47.2
CsaV3_3G041540 Cucumis sativus L. HOM05D005746 ORTHO05D007105 6.9e-68 261.5 303 46.9
RcHm_v2.0_Chr2g0168711 Rosa chinensis HOM05D005746 ORTHO05D007105 6.9e-68 261.5 303 47.2
FAN02G0556 Fragaria x ananassa HOM05D005746 ORTHO05D007105 1.5e-67 260.4 301 46.8
AUR62039819 Chenopodium quinoa HOM05D005746 ORTHO05D007105 2.6e-67 259.6 313 45.7
EL10Ac2g02971 Beta vulgaris HOM05D005746 ORTHO05D007105 5.8e-67 258.5 314 45.9
ClCG10G014980 Citrullus lanatus HOM05D005746 ORTHO05D007105 1.3e-66 257.3 303 46.9
AUR62034394 Chenopodium quinoa HOM05D005746 ORTHO05D007105 2.2e-66 256.5 313 46.0
TAR374G0083 Trochodendron aralioides HOM05D005746 ORTHO05D007105 2.9e-66 256.1 313 46.3
Lj2g0006836 Lotus japonicus HOM05D005746 ORTHO05D007105 3.2e-65 252.7 323 45.2
Psat1g074560 Pisum sativum HOM05D005746 ORTHO05D007105 3.2e-65 252.7 319 46.7
Nn4g23132 Nelumbo nucifera HOM05D005746 ORTHO05D007105 1.0e-63 247.7 313 45.0
Aqoxy3G00678 Aquilegia oxysepala HOM05D005746 ORTHO05D007105 3.9e-63 245.7 314 43.9
MBI05_g35450_MAGBIO Magnolia biondii HOM05D005746 ORTHO05D007105 3.9e-63 245.7 314 44.3
CARHR165190 Cardamine hirsuta HOM05D005746 ORTHO05D007105 5.1e-63 245.4 304 47.0
PGR083G2853 Punica granatum HOM05D005746 ORTHO05D007105 5.1e-63 245.4 307 46.3
Aa31LG2G4330 Aethionema arabicum HOM05D005746 ORTHO05D007105 8.7e-63 244.6 307 46.3
AT3G55160 Arabidopsis thaliana HOM05D005746 ORTHO05D007105 1.1e-62 244.2 304 47.0
Carub.0005s2180 Capsella rubella HOM05D005746 ORTHO05D007105 1.1e-62 244.2 304 47.4
Sp2g17500 Schrenkiella parvula HOM05D005746 ORTHO05D007105 1.1e-62 244.2 304 47.0
BcaC06g33649 Brassica carinata HOM05D005746 ORTHO05D007105 4.3e-62 242.3 304 47.4
C07p37790 Brassica napus HOM05D005746 ORTHO05D007105 4.3e-62 242.3 304 47.4
BolC7t44300H Brassica oleracea HOM05D005746 ORTHO05D007105 4.3e-62 242.3 304 47.4
vmacro05746 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 5.6e-62 241.9 316 45.3
Thhalv10003503m.g Eutrema salsugineum HOM05D005746 ORTHO05D007105 7.3e-62 241.5 304 47.0
VMungo0464G0495 Vigna mungo HOM05D005746 ORTHO05D007105 7.3e-62 241.5 313 45.0
AL5G36280 Arabidopsis lyrata HOM05D005746 ORTHO05D007105 9.6e-62 241.1 304 46.4
Glyma.19G021700 Glycine max HOM05D005746 ORTHO05D007105 1.6e-61 240.4 312 45.8
Phvul.004G028000 Phaseolus vulgaris HOM05D005746 ORTHO05D007105 1.6e-61 240.4 309 45.3
Ca_04277_v3 Cicer arietinum L. HOM05D005746 ORTHO05D007105 8.1e-61 238.0 322 46.0
Lalb_Chr06g0175391 Lupinus albus HOM05D005746 ORTHO05D007105 1.4e-60 237.3 316 44.0
TPR.G10375 Trifolium pratense HOM05D005746 ORTHO05D007105 1.8e-60 236.9 320 45.3
A06p40280 Brassica napus HOM05D005746 ORTHO05D007105 3.1e-60 236.1 304 46.1
BraA06t26946Z Brassica rapa HOM05D005746 ORTHO05D007105 3.1e-60 236.1 304 46.1
CAN.G352.19 Capsicum annuum HOM05D005746 ORTHO05D007105 4.5e-59 232.3 269 53.2
VMungo0464G0208 Vigna mungo HOM05D005746 ORTHO05D007105 6.0e-56 221.9 308 43.5
CDE09G1403 Ceratophyllum demersum HOM05D005746 ORTHO05D007105 1.1e-54 217.6 322 39.8
vmacro22549 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 1.5e-54 217.2 316 42.7
CAN.G385.2 Capsicum annuum HOM05D005746 ORTHO05D007105 3.7e-53 212.6 168 70.2
Medtr6g011760 Medicago truncatula HOM05D005746 ORTHO05D007105 8.1e-53 211.5 209 55.5
Zm00001eb414960 Zea mays HOM05D005746 ORTHO05D007105 3.4e-51 206.1 300 41.3
HPP92_011243 Vanilla planifolia HOM05D005746 ORTHO05D007105 2.2e-50 203.4 304 42.4
ATR0564G261 Amborella trichopoda HOM05D005746 ORTHO05D007105 6.0e-48 195.3 351 36.5
vmacro05485 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 3.1e-44 183.0 313 39.0
SEGI_38380 Sequoiadendron giganteum HOM05D005746 ORTHO05D007105 3.7e-37 159.5 343 30.9
Gohir.D09G015833 Gossypium hirsutum HOM05D005746 ORTHO05D007105 4.1e-36 156.0 220 40.5
FAN09G1953 Fragaria x ananassa HOM05D005746 ORTHO05D007105 5.0e-34 149.1 108 64.8
SMO367G0809 Selaginella moellendorffii HOM05D005746 ORTHO05D007105 7.2e-33 145.2 320 30.6
CAN.G853.24 Capsicum annuum HOM05D005746 ORTHO05D007105 1.2e-32 144.4 133 60.9
Pp3c6_28730 Physcomitrium patens HOM05D005746 ORTHO05D007105 1.2e-32 144.4 273 37.0
GSVIVG01011388001 Vitis vinifera HOM05D005746 ORTHO05D007105 1.0e-31 141.4 187 44.9
Mapoly0207s0007 Marchantia polymorpha HOM05D005746 ORTHO05D007105 1.9e-30 137.1 256 37.5
AagrBONN_evm.TU.Sc2ySwM_369.378 Anthoceros agrestis HOM05D005746 ORTHO05D007105 3.2e-25 119.8 168 38.7
unitig_0.g531 Utricularia gibba HOM05D005746 ORTHO05D007105 2.9e-18 96.7 269 29.4
CBR_g50021 Chara braunii HOM05D005746 ORTHO05D007105 2.5e-17 93.6 113 43.4
Manes.15G175000 Manihot esculenta HOM05D005746 ORTHO05D007105 1.1e-14 84.7 60 63.3
Thecc.04G080100 Theobroma cacao HOM05D005746 ORTHO05D007105 3.7e-13 79.7 56 66.1
Prupe.3G268800 Prunus persica HOM05D005746 ORTHO05D007105 1.1e-12 78.2 46 76.1
AagrBONN_evm.TU.Sc2ySwM_369.374 Anthoceros agrestis HOM05D005746 ORTHO05D007105 2.4e-12 77.0 100 40.0
MCO11G207 Micromonas commoda HOM05D005746 ORTHO05D007105 2.9e-10 70.1 142 31.0
Gohir.D09G015800 Gossypium hirsutum HOM05D005746 ORTHO05D007105 9.4e-09 65.1 34 85.3


User provided reference genes

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