Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G691.19 Capsicum annuum HOM05D006082 ORTHO05D007616 3.2e-136 488.4 247 100.0
PGSC0003DMG400016241 Solanum tuberosum HOM05D006082 ORTHO05D007616 3.7e-132 474.9 247 96.8
Solyc11g008790.3 Solanum lycopersicum HOM05D006082 ORTHO05D007616 2.0e-130 469.2 247 96.0
Sopen11g004570 Solanum pennellii HOM05D006082 ORTHO05D007616 7.6e-130 467.2 247 95.5
Nitab4.5_0000743g0220 Nicotiana tabacum HOM05D006082 ORTHO05D007616 4.7e-103 378.3 249 80.7
Peaxi162Scf00090g00046 Petunia axillaris HOM05D006082 ORTHO05D007616 1.3e-89 333.6 278 67.3
Nitab4.5_0001677g0060 Nicotiana tabacum HOM05D006082 ORTHO05D007616 4.2e-88 328.6 299 63.5
MSTRG.15681 Avicennia marina HOM05D006082 ORTHO05D007616 1.1e-72 277.3 229 61.6
Cc03_g11310 Coffea canephora HOM05D006082 ORTHO05D007616 4.7e-71 271.9 230 58.7
TPR.G16094 Trifolium pratense HOM05D006082 ORTHO05D007616 8.9e-70 267.7 223 59.2
Psat3g079600 Pisum sativum HOM05D006082 ORTHO05D007616 1.2e-69 267.3 234 57.3
Migut.L00265 Erythranthe guttata HOM05D006082 ORTHO05D007616 4.9e-68 261.9 233 58.8
GSVIVG01027464001 Vitis vinifera HOM05D006082 ORTHO05D007616 3.2e-67 259.2 220 60.0
TAR375G0813 Trochodendron aralioides HOM05D006082 ORTHO05D007616 4.1e-67 258.8 220 62.3
HanXRQChr14g0454421 Helianthus annuus HOM05D006082 ORTHO05D007616 5.4e-67 258.5 225 58.2
Lalb_Chr17g0343121 Lupinus albus HOM05D006082 ORTHO05D007616 2.0e-66 256.5 224 56.7
Glyma.03G126300 Glycine max HOM05D006082 ORTHO05D007616 2.7e-66 256.1 223 57.4
ECA238G2330 Erigeron canadensis HOM05D006082 ORTHO05D007616 4.6e-66 255.4 226 56.6
Lj1g0004702 Lotus japonicus HOM05D006082 ORTHO05D007616 4.6e-66 255.4 222 57.2
Medtr7g089460 Medicago truncatula HOM05D006082 ORTHO05D007616 4.6e-66 255.4 223 56.5
QL01p017595 Quercus lobata HOM05D006082 ORTHO05D007616 4.6e-66 255.4 221 57.5
Ciclev10022037m.g Citrus clementina HOM05D006082 ORTHO05D007616 7.8e-66 254.6 225 56.9
Gohir.A11G102200 Gossypium hirsutum HOM05D006082 ORTHO05D007616 3.9e-65 252.3 223 58.3
Potri.014G107300 Populus trichocarpa HOM05D006082 ORTHO05D007616 5.0e-65 251.9 221 59.3
Glyma.19G129400 Glycine max HOM05D006082 ORTHO05D007616 6.6e-65 251.5 222 56.8
Phvul.001G121700 Phaseolus vulgaris HOM05D006082 ORTHO05D007616 6.6e-65 251.5 223 56.5
Gorai.007G114300 Gossypium raimondii HOM05D006082 ORTHO05D007616 1.1e-64 250.8 223 57.8
Dinv04258 Davidia involucrata HOM05D006082 ORTHO05D007616 9.5e-64 247.7 225 58.2
Atru.chr5.795 Acer truncatum HOM05D006082 ORTHO05D007616 1.2e-63 247.3 222 55.9
Duzib133G0864 Durio zibethinus HOM05D006082 ORTHO05D007616 1.4e-62 243.8 223 55.6
TWI14G1025 Tripterygium wilfordii HOM05D006082 ORTHO05D007616 1.2e-61 240.7 223 56.5
Thecc.01G331100 Theobroma cacao HOM05D006082 ORTHO05D007616 1.5e-61 240.4 223 56.1
Ca_08380_v3 Cicer arietinum L. HOM05D006082 ORTHO05D007616 5.8e-61 238.4 196 61.7
PGR031G0479 Punica granatum HOM05D006082 ORTHO05D007616 5.8e-61 238.4 229 56.3
Prupe.2G201100 Prunus persica HOM05D006082 ORTHO05D007616 7.5e-61 238.0 223 58.3
ATR1136G056 Amborella trichopoda HOM05D006082 ORTHO05D007616 1.3e-60 237.3 222 55.4
MD01G1091900 Malus domestica HOM05D006082 ORTHO05D007616 1.7e-60 236.9 223 57.0
Haze_15761 Corylus avellana HOM05D006082 ORTHO05D007616 3.7e-60 235.7 225 55.6
Eucgr.G03261 Eucalyptus grandis HOM05D006082 ORTHO05D007616 6.4e-60 235.0 222 56.8
FAN06G3489 Fragaria x ananassa HOM05D006082 ORTHO05D007616 8.3e-60 234.6 229 55.0
arahy.Tifrunner.gnm1.ann1.6SRZ86 Arachis hypogaea HOM05D006082 ORTHO05D007616 1.1e-59 234.2 225 55.6
CsaV3_3G007110 Cucumis sativus L. HOM05D006082 ORTHO05D007616 1.4e-59 233.8 222 51.8
arahy.Tifrunner.gnm1.ann1.9R6DDK Arachis hypogaea HOM05D006082 ORTHO05D007616 1.9e-59 233.4 225 56.0
FvH4_7g17940 Fragaria vesca HOM05D006082 ORTHO05D007616 4.1e-59 232.3 229 54.6
Actinidia33031 Actinidia chinensis HOM05D006082 ORTHO05D007616 1.2e-58 230.7 224 54.5
MELO3C005932.2 Cucumis melo HOM05D006082 ORTHO05D007616 2.7e-58 229.6 228 50.9
FAN06G1515 Fragaria x ananassa HOM05D006082 ORTHO05D007616 4.6e-58 228.8 235 53.6
RcHm_v2.0_Chr1g0361381 Rosa chinensis HOM05D006082 ORTHO05D007616 7.8e-58 228.0 229 54.1
CANSAT56G1086 Cannabis sativa HOM05D006082 ORTHO05D007616 4.3e-56 222.2 205 57.1
FAN03G2817 Fragaria x ananassa HOM05D006082 ORTHO05D007616 7.3e-56 221.5 241 51.9
Nn1g00467 Nelumbo nucifera HOM05D006082 ORTHO05D007616 4.7e-55 218.8 217 56.2
C09p01160 Brassica napus HOM05D006082 ORTHO05D007616 6.2e-55 218.4 226 54.4
A09p01070 Brassica napus HOM05D006082 ORTHO05D007616 1.1e-54 217.6 226 54.4
PSO675G6409 Papaver somniferum HOM05D006082 ORTHO05D007616 1.1e-54 217.6 236 50.0
Aqoxy5G00354 Aquilegia oxysepala HOM05D006082 ORTHO05D007616 1.8e-54 216.9 225 51.6
ClCG05G000050 Citrullus lanatus HOM05D006082 ORTHO05D007616 4.0e-54 215.7 231 49.4
A10p00890 Brassica napus HOM05D006082 ORTHO05D007616 1.5e-53 213.8 221 52.5
PSO675G6921 Papaver somniferum HOM05D006082 ORTHO05D007616 2.6e-53 213.0 236 49.2
Sp1g01290 Schrenkiella parvula HOM05D006082 ORTHO05D007616 2.6e-53 213.0 221 50.7
Carub.0001s0120 Capsella rubella HOM05D006082 ORTHO05D007616 3.4e-53 212.6 221 52.5
BraA10t42369Z Brassica rapa HOM05D006082 ORTHO05D007616 4.4e-53 212.2 221 52.0
CARHR001490 Cardamine hirsuta HOM05D006082 ORTHO05D007616 4.4e-53 212.2 221 51.6
BcaB03g13546 Brassica carinata HOM05D006082 ORTHO05D007616 5.8e-53 211.8 221 51.6
AL1G11510 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 7.6e-53 211.5 221 52.0
Thhalv10008618m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 9.9e-53 211.1 219 52.5
Thhalv10028930m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 1.7e-52 210.3 225 51.1
Sp6g01450 Schrenkiella parvula HOM05D006082 ORTHO05D007616 1.7e-52 210.3 225 53.3
CDE08G0270 Ceratophyllum demersum HOM05D006082 ORTHO05D007616 2.9e-52 209.5 225 48.0
Carub.0006s3568 Capsella rubella HOM05D006082 ORTHO05D007616 8.4e-52 208.0 228 50.0
AL6G51830 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 1.4e-51 207.2 219 50.7
THA.LOC104815904 Tarenaya hassleriana HOM05D006082 ORTHO05D007616 2.4e-51 206.5 220 48.2
Ah.01g019340 Amaranthus hybridus HOM05D006082 ORTHO05D007616 3.2e-51 206.1 218 50.9
BolC5t28877H Brassica oleracea HOM05D006082 ORTHO05D007616 1.2e-50 204.1 221 51.1
Gohir.D11G106800 Gossypium hirsutum HOM05D006082 ORTHO05D007616 1.6e-50 203.8 223 50.7
BolC9t53049H Brassica oleracea HOM05D006082 ORTHO05D007616 2.7e-50 203.0 255 48.2
C05p00920 Brassica napus HOM05D006082 ORTHO05D007616 3.5e-50 202.6 221 50.7
BraA09t35778Z Brassica rapa HOM05D006082 ORTHO05D007616 3.5e-50 202.6 254 48.4
AUR62016743 Chenopodium quinoa HOM05D006082 ORTHO05D007616 6.0e-50 201.8 218 50.0
CARHR250170 Cardamine hirsuta HOM05D006082 ORTHO05D007616 7.8e-50 201.4 221 49.3
FAN10G2982 Fragaria x ananassa HOM05D006082 ORTHO05D007616 7.8e-50 201.4 242 49.2
Manes.05G014900 Manihot esculenta HOM05D006082 ORTHO05D007616 3.9e-49 199.1 172 57.0
Os03g0784300 Oryza sativa ssp. japonica HOM05D006082 ORTHO05D007616 4.7e-47 192.2 232 45.3
HPP92_015681 Vanilla planifolia HOM05D006082 ORTHO05D007616 1.4e-46 190.7 223 46.2
CANSAT56G0035 Cannabis sativa HOM05D006082 ORTHO05D007616 5.2e-46 188.7 205 52.2
Lsat_1_v5_gn_2_88861 Lactuca sativa HOM05D006082 ORTHO05D007616 6.8e-46 188.3 219 49.3
unitig_899.g14456 Utricularia gibba HOM05D003044 ORTHO05D007616 1.2e-45 187.6 199 51.8
Aa31LG1G10340 Aethionema arabicum HOM05D006082 ORTHO05D007616 7.6e-45 184.9 231 47.6
MBI06_g35217_MAGBIO Magnolia biondii HOM05D006082 ORTHO05D007616 1.9e-43 180.3 222 50.0
AT4G01510 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 5.4e-43 178.7 192 52.1
Aa31LG5G1260 Aethionema arabicum HOM05D006082 ORTHO05D007616 1.0e-41 174.5 220 44.1
SEGI_04405 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 1.0e-41 174.5 217 43.3
FAN01G2730 Fragaria x ananassa HOM05D006082 ORTHO05D007616 5.1e-41 172.2 227 48.5
COL.COLO4_23067 Corchorus olitorius HOM05D006082 ORTHO05D007616 1.9e-40 170.2 152 56.6
CiPaw.01G087100 Carya illinoinensis HOM05D006082 ORTHO05D007616 2.5e-40 169.9 179 52.5
Potri.002G181700 Populus trichocarpa HOM05D006082 ORTHO05D007616 4.0e-38 162.5 223 43.5
Sc24g0001860 Simmondsia chinensis HOM05D006082 ORTHO05D007616 2.0e-37 160.2 199 46.7
vmacro11192 Vaccinium macrocarpon HOM05D006082 ORTHO05D007616 3.2e-35 152.9 307 37.5
CSS0012451 Camellia sinensis var. sinensis HOM05D006082 ORTHO05D007616 9.3e-35 151.4 195 48.2
Pp3c10_9330 Physcomitrium patens HOM05D006082 ORTHO05D007616 2.1e-34 150.2 206 44.2
Zm00001eb059810 Zea mays HOM05D006082 ORTHO05D007616 7.9e-34 148.3 197 41.1
Migut.L00585 Erythranthe guttata HOM05D006082 ORTHO05D007616 1.0e-33 147.9 99 70.7
EL10Ac9g21719 Beta vulgaris HOM05D006082 ORTHO05D003517 2.3e-33 146.7 163 52.1
Mapoly0050s0018 Marchantia polymorpha HOM05D006082 ORTHO05D007616 1.3e-31 141.0 208 40.9
C05p00960 Brassica napus HOM05D006082 ORTHO05D007616 6.2e-31 138.7 283 36.4
AT1G01020 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 1.5e-29 134.0 179 44.1
DCAR_014739 Daucus carota HOM05D006082 ORTHO05D007616 2.6e-29 133.3 227 37.9
BolC5t28880H Brassica oleracea HOM05D006082 ORTHO05D007616 4.9e-28 129.0 277 36.5
CBR_g1036 Chara braunii HOM05D006082 ORTHO05D007616 8.4e-28 128.3 244 36.5
arahy.Tifrunner.gnm1.ann1.PGF6M0 Arachis hypogaea HOM05D006082 ORTHO05D007616 4.2e-27 125.9 253 36.8
GSVIVG01003191001 Vitis vinifera HOM05D006082 ORTHO05D007616 4.6e-26 122.5 132 53.0
Hma1.2p1_0451F.1_g155790 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 7.9e-26 121.7 73 74.0
Hma1.2p1_0451F.1_g155800 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 1.8e-25 120.6 132 54.5
SMO367G0224 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 2.3e-25 120.2 196 37.2
SEGI_20928 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 3.9e-25 119.4 131 46.6
Hma1.2p1_0262F.1_g105255 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 5.1e-25 119.0 75 69.3
MD07G1162500 Malus domestica HOM05D006082 ORTHO05D007616 4.0e-22 109.4 137 46.0
AagrBONN_evm.TU.Sc2ySwM_340.22 Anthoceros agrestis HOM05D006082 ORTHO05D007616 6.9e-22 108.6 210 33.8
Sed0024729 Sechium edule HOM05D006082 ORTHO05D007616 6.9e-22 108.6 118 50.0
QL03p043604 Quercus lobata HOM05D006082 ORTHO05D007616 2.5e-19 100.1 194 34.5
GSVIVG01003186001 Vitis vinifera HOM05D006082 ORTHO05D007616 5.7e-16 89.0 72 66.7
CAN.G34.12 Capsicum annuum HOM05D006082 ORTHO05D007616 1.6e-15 87.4 72 66.7
BcaC05g24597 Brassica carinata HOM05D006082 ORTHO05D007616 2.8e-15 86.7 194 33.0
C05p00940 Brassica napus HOM05D006082 ORTHO05D007616 8.4e-12 75.1 106 45.3
SMO230G0051 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 1.2e-10 71.2 165 30.9
MD07G1162600 Malus domestica HOM05D006082 ORTHO05D007616 3.7e-07 59.7 58 60.3
BcaC05g24595 Brassica carinata HOM05D006082 ORTHO05D007616 3.1e-06 56.6 80 48.8


User provided reference genes

Program Settings