Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 1.0e-193 679.9 343 100.0
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.9e-134 483.0 287 84.3
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.9e-134 483.0 287 84.3
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 5.1e-132 474.9 287 82.9
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 6.2e-130 468.0 287 82.2
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 5.3e-105 385.2 276 73.9
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 5.3e-105 385.2 286 71.0
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 6.9e-105 384.8 281 71.9
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 9.0e-105 384.4 281 71.2
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 9.0e-105 384.4 281 71.2
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 4.5e-104 382.1 278 71.2
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 1.7e-103 380.2 262 75.2
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 1.1e-102 377.5 281 70.1
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 2.1e-101 373.2 277 71.8
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 3.0e-100 369.4 273 70.7
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 2.0e-99 366.7 272 70.2
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 3.3e-99 365.9 273 68.5
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 1.3e-98 364.0 274 70.8
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 2.2e-98 363.2 268 70.9
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 2.8e-98 362.8 268 68.7
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 3.7e-98 362.5 264 69.3
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 1.1e-97 360.9 271 69.0
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 1.1e-97 360.9 277 67.1
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 2.4e-97 359.8 312 62.8
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 3.1e-97 359.4 276 68.1
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 4.1e-97 359.0 277 67.5
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 6.9e-97 358.2 277 68.2
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 1.5e-96 357.1 266 68.4
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 2.0e-96 356.7 275 68.4
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 2.0e-96 356.7 258 70.2
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 4.5e-96 355.5 269 69.5
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 5.9e-96 355.1 274 66.4
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 5.9e-96 355.1 276 65.2
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 1.0e-95 354.4 274 66.4
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 1.3e-95 354.0 267 69.7
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 1.3e-95 354.0 273 68.1
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 2.2e-95 353.2 264 72.3
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 2.2e-95 353.2 277 65.3
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 2.9e-95 352.8 268 69.0
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 3.8e-95 352.4 268 67.2
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 3.8e-95 352.4 280 64.6
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 3.8e-95 352.4 281 66.5
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 3.2e-94 349.4 271 66.4
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 4.2e-94 349.0 276 65.6
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 4.2e-94 349.0 265 67.2
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 5.5e-94 348.6 291 64.3
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 5.5e-94 348.6 270 66.7
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 2.7e-93 346.3 266 66.9
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 3.6e-93 345.9 271 62.7
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 1.0e-92 344.4 273 67.4
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 3.0e-92 342.8 286 59.8
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 3.0e-92 342.8 265 66.4
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 3.9e-92 342.4 271 67.5
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 8.8e-92 341.3 276 65.2
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 1.5e-91 340.5 282 63.5
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 2.0e-91 340.1 266 67.3
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 2.6e-91 339.7 265 66.0
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 4.4e-91 339.0 265 65.7
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 4.4e-91 339.0 266 67.7
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 4.4e-91 339.0 266 67.7
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 1.3e-90 337.4 265 65.3
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 1.7e-90 337.0 276 64.9
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 1.7e-90 337.0 262 66.4
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 2.8e-90 336.3 276 64.9
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 4.8e-90 335.5 270 64.4
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 4.8e-90 335.5 271 64.9
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 1.4e-89 334.0 277 64.3
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 1.4e-89 334.0 270 65.6
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 1.8e-89 333.6 274 63.9
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 2.4e-89 333.2 286 61.9
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 5.3e-89 332.0 265 64.2
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 5.3e-89 332.0 275 63.6
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 7.0e-89 331.6 264 66.3
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 7.0e-89 331.6 264 66.3
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 7.0e-89 331.6 290 60.3
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 7.0e-89 331.6 271 63.8
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 9.1e-89 331.3 286 61.5
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 1.5e-88 330.5 274 63.1
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 1.5e-88 330.5 290 60.3
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 1.5e-88 330.5 342 55.0
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 1.5e-88 330.5 275 63.6
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 2.6e-88 329.7 265 63.8
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 3.5e-88 329.3 274 63.9
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 4.5e-88 328.9 268 64.2
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 5.9e-88 328.6 266 63.2
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 1.0e-87 327.8 313 59.4
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 1.7e-87 327.0 269 65.4
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 7.2e-78 295.0 275 57.5
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 2.9e-71 273.1 274 58.8
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 3.2e-70 269.6 269 56.5
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 1.8e-68 263.8 183 69.9
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 5.2e-68 262.3 195 69.2
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 1.7e-63 247.3 177 69.5
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 6.6e-63 245.4 181 65.7
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 1.2e-59 234.6 185 66.5
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 7.8e-56 221.9 177 66.7
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.7e-55 220.7 141 78.0
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 1.5e-54 217.6 266 45.5
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 9.5e-54 214.9 178 64.0
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 2.1e-53 213.8 272 46.7
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 2.8e-53 213.4 138 73.2
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 5.2e-52 209.1 276 47.5
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 9.2e-49 198.4 289 45.7
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 3.5e-48 196.4 168 61.3
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 4.6e-48 196.1 275 42.9
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 1.3e-47 194.5 158 64.6
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 2.3e-39 167.2 263 40.7
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 6.2e-37 159.1 213 45.1
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 1.4e-25 121.3 94 61.7
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 4.6e-24 116.3 78 73.1
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 1.7e-23 114.4 156 45.5
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 3.3e-22 110.2 277 32.9
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 4.2e-17 93.2 182 39.0
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 4.2e-17 93.2 77 61.0
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 4.6e-16 89.7 98 53.1
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 3.3e-14 83.6 67 65.7
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 8.1e-13 79.0 64 59.4
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 2.9e-10 70.5 148 35.1
unitig_748.g7104 Utricularia gibba HOM05D006622 ORTHO05D007939 1.6e-08 64.7 74 45.9


User provided reference genes

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