Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G689.5 Capsicum annuum HOM05D004547 ORTHO05D005133 9.8e-43 176.4 90 100.0
CAN.G16.15 Capsicum annuum HOM05D004547 ORTHO05D005133 9.9e-19 96.7 61 82.0
CAN.G280.11 Capsicum annuum HOM05D004547 ORTHO05D005133 8.4e-18 93.6 53 86.8
Solyc05g006950.4 Solanum lycopersicum HOM05D004547 ORTHO05D005133 1.9e-17 92.4 61 80.3
CAN.G74.49 Capsicum annuum HOM05D004547 ORTHO05D005133 2.4e-17 92.0 64 78.1
PGSC0003DMG400017618 Solanum tuberosum HOM05D004547 ORTHO05D005133 4.2e-17 91.3 61 78.7
Sopen05g002910 Solanum pennellii HOM05D004547 ORTHO05D005133 7.1e-17 90.5 61 78.7
Peaxi162Scf00023g01214 Petunia axillaris HOM05D004547 ORTHO05D005133 7.8e-16 87.0 61 75.4
CAN.G903.1 Capsicum annuum HOM05D004547 ORTHO05D005133 1.5e-14 82.8 59 72.9
Nitab4.5_0004665g0060 Nicotiana tabacum HOM05D004547 ORTHO05D005133 1.9e-14 82.4 61 68.9
Nitab4.5_0000895g0220 Nicotiana tabacum HOM05D004547 ORTHO05D005133 2.8e-13 78.6 53 71.7
CSS0028755 Camellia sinensis var. sinensis HOM05D004547 ORTHO05D005133 9.0e-12 73.6 61 62.3
Actinidia31780 Actinidia chinensis HOM05D004547 ORTHO05D005133 1.5e-11 72.8 61 59.0
CiPaw.03G093300 Carya illinoinensis HOM05D004547 ORTHO05D005133 2.6e-11 72.0 61 62.3
Hma1.2p1_0432F.1_g151760 Hydrangea macrophylla HOM05D004547 ORTHO05D005133 2.6e-11 72.0 61 60.7
Thecc.03G155600 Theobroma cacao HOM05D004547 ORTHO05D005133 5.8e-11 70.9 61 60.7
COL.COLO4_14121 Corchorus olitorius HOM05D004547 ORTHO05D005133 1.7e-10 69.3 61 59.0
Lj1A979T84 Lonicera japonica HOM05D004547 ORTHO05D005133 1.7e-10 69.3 61 59.0
MD01G1182800 Malus domestica HOM05D004547 ORTHO05D005133 3.8e-10 68.2 61 57.4
TAR374G0871 Trochodendron aralioides HOM05D004547 ORTHO05D005133 3.8e-10 68.2 54 55.6
TAR375G0699 Trochodendron aralioides HOM05D004547 ORTHO05D005133 3.8e-10 68.2 54 57.4
Gohir.A12G198300 Gossypium hirsutum HOM05D004547 ORTHO05D005133 4.9e-10 67.8 61 57.4
Prupe.2G277000 Prunus persica HOM05D004547 ORTHO05D005133 4.9e-10 67.8 61 57.4
Ciclev10004313m.g Citrus clementina HOM05D004547 ORTHO05D005133 6.4e-10 67.4 61 59.0
Dinv28576 Davidia involucrata HOM05D004547 ORTHO05D005133 6.4e-10 67.4 61 57.4
Oeu022486.1 Olea europaea HOM05D004547 ORTHO05D005133 6.4e-10 67.4 61 55.7
SGA_v2.0_scaffold44G16547 Striga asiatica HOM05D004547 ORTHO05D005133 6.4e-10 67.4 62 58.1
PGR042G2008 Punica granatum HOM05D004547 ORTHO05D005133 8.4e-10 67.0 61 59.0
GSVIVG01018659001 Vitis vinifera HOM05D004547 ORTHO05D005133 8.4e-10 67.0 61 54.1
Gorai.008G216000 Gossypium raimondii HOM05D004547 ORTHO05D005133 1.1e-09 66.6 61 57.4
Cc02_g04280 Coffea canephora HOM05D004547 ORTHO05D005133 1.4e-09 66.2 61 55.7
Migut.F00479 Erythranthe guttata HOM05D004547 ORTHO05D005133 1.4e-09 66.2 61 54.1
Gohir.D12G200900 Gossypium hirsutum HOM05D004547 ORTHO05D005133 1.4e-09 66.2 61 55.7
DCAR_020189 Daucus carota HOM05D004547 ORTHO05D005133 1.9e-09 65.9 61 57.4
Duzib205G1908 Durio zibethinus HOM05D004547 ORTHO05D005133 1.9e-09 65.9 54 57.4
QL09p005748 Quercus lobata HOM05D004547 ORTHO05D005133 1.9e-09 65.9 61 60.7
FvH4_7g27490 Fragaria vesca HOM05D004547 ORTHO05D005133 2.4e-09 65.5 61 57.4
FAN01G0567 Fragaria x ananassa HOM05D004547 ORTHO05D005133 2.4e-09 65.5 61 57.4
FAN03G1184 Fragaria x ananassa HOM05D004547 ORTHO05D005133 2.4e-09 65.5 61 57.4
FAN06G1879 Fragaria x ananassa HOM05D004547 ORTHO05D005133 2.4e-09 65.5 61 57.4
RcHm_v2.0_Chr1g0374281 Rosa chinensis HOM05D004547 ORTHO05D005133 2.4e-09 65.5 61 57.4
Sc14g0005530 Simmondsia chinensis HOM05D004547 ORTHO05D005133 4.2e-09 64.7 55 54.5
BcaB08g35501 Brassica carinata HOM05D004547 ORTHO05D005133 5.4e-09 64.3 54 57.4
THA.LOC104811522 Tarenaya hassleriana HOM05D004547 ORTHO05D005133 5.4e-09 64.3 54 57.4
CANSAT56G3837 Cannabis sativa HOM05D004547 ORTHO05D005133 7.1e-09 63.9 61 59.0
MD07G1253600 Malus domestica HOM05D004547 ORTHO05D005133 7.1e-09 63.9 61 55.7
Sabra03G0075600 Salix brachista HOM05D004547 ORTHO05D005133 7.1e-09 63.9 61 55.7
SalBow5G1900 Salvia bowleyana HOM05D004547 ORTHO05D005133 9.3e-09 63.5 59 54.2
SalBow5G5604 Salvia bowleyana HOM05D004547 ORTHO05D005133 9.3e-09 63.5 59 54.2
A10p09340 Brassica napus HOM05D004547 ORTHO05D005133 1.2e-08 63.2 54 55.6
BraA10t43010Z Brassica rapa HOM05D004547 ORTHO05D005133 1.2e-08 63.2 54 55.6
Cfa008167 Carpinus fangiana HOM05D004547 ORTHO05D005133 1.6e-08 62.8 61 59.0
Eucgr.A02893 Eucalyptus grandis HOM05D004547 ORTHO05D005133 1.6e-08 62.8 61 52.5
Nn1g01023 Nelumbo nucifera HOM05D004547 ORTHO05D005133 2.1e-08 62.4 83 45.8
Lj3g0004511 Lotus japonicus HOM05D004547 ORTHO05D005133 2.7e-08 62.0 61 55.7
Manes.06G134600 Manihot esculenta HOM05D004547 ORTHO05D005133 2.7e-08 62.0 61 55.7
BcaC03g14608 Brassica carinata HOM05D004547 ORTHO05D005133 3.5e-08 61.6 54 53.7
A02p12350 Brassica napus HOM05D004547 ORTHO05D005133 3.5e-08 61.6 54 53.7
C02p20480 Brassica napus HOM05D004547 ORTHO05D005133 3.5e-08 61.6 54 53.7
BcaC04g20676 Brassica carinata HOM05D004547 ORTHO05D005133 4.6e-08 61.2 54 53.7
C09p40720 Brassica napus HOM05D004547 ORTHO05D005133 4.6e-08 61.2 54 53.7
BolC9t56951H Brassica oleracea HOM05D004547 ORTHO05D005133 4.6e-08 61.2 54 53.7
Cpa.g.sc3.324 Carica papaya HOM05D004547 ORTHO05D005133 4.6e-08 61.2 54 55.6
ClCG05G007360 Citrullus lanatus HOM05D004547 ORTHO05D005133 4.6e-08 61.2 61 50.8
Potri.003G109100 Populus trichocarpa HOM05D004547 ORTHO05D005133 4.6e-08 61.2 61 54.1
Carub.0008s1145 Capsella rubella HOM05D004547 ORTHO05D005133 6.0e-08 60.8 61 50.8
CsaV3_3G016130 Cucumis sativus L. HOM05D004547 ORTHO05D005133 6.0e-08 60.8 61 50.8
Sp6g13590 Schrenkiella parvula HOM05D004547 ORTHO05D005133 6.0e-08 60.8 54 53.7
Atru.chr1.728 Acer truncatum HOM05D004547 ORTHO05D005133 1.0e-07 60.1 61 49.2
Aqoxy2G03231 Aquilegia oxysepala HOM05D004547 ORTHO05D005133 1.0e-07 60.1 61 47.5
Sed0008837 Sechium edule HOM05D004547 ORTHO05D005133 1.0e-07 60.1 61 49.2
CARHR264160 Cardamine hirsuta HOM05D004547 ORTHO05D005133 1.3e-07 59.7 54 51.9
PSO266G0090 Papaver somniferum HOM05D004547 ORTHO05D005133 1.3e-07 59.7 61 50.8
PSO384G4058 Papaver somniferum HOM05D004547 ORTHO05D005133 1.3e-07 59.7 61 50.8
Aa31sc202G10 Aethionema arabicum HOM05D004547 ORTHO05D005133 1.7e-07 59.3 52 55.8
MSTRG.8826 Avicennia marina HOM05D004547 ORTHO05D005133 1.7e-07 59.3 61 49.2
ECA232G2122 Erigeron canadensis HOM05D004547 ORTHO05D005133 1.7e-07 59.3 61 59.0
AL8G25720 Arabidopsis lyrata HOM05D004547 ORTHO05D005133 3.0e-07 58.5 54 51.9
MELO3C006811.2 Cucumis melo HOM05D004547 ORTHO05D005133 3.0e-07 58.5 61 49.2
Thhalv10012691m.g Eutrema salsugineum HOM05D004547 ORTHO05D005133 3.9e-07 58.2 54 53.7
AT5G51430 Arabidopsis thaliana HOM05D004547 ORTHO05D005133 5.1e-07 57.8 54 50.0
HanXRQChr16g0512771 Helianthus annuus HOM05D004547 ORTHO05D005133 5.1e-07 57.8 61 57.4
Rhsim03G0167200 Rhododendron simsii HOM05D004547 ORTHO05D005133 5.1e-07 57.8 61 54.1
Sed0001089 Sechium edule HOM05D004547 ORTHO05D005133 5.1e-07 57.8 61 47.5
Lsat_1_v5_gn_9_52061 Lactuca sativa HOM05D004547 ORTHO05D005133 6.6e-07 57.4 61 57.4
Lalb_Chr03g0024271 Lupinus albus HOM05D004547 ORTHO05D005133 6.6e-07 57.4 61 49.2
vmacro06799 Vaccinium macrocarpon HOM05D004547 ORTHO05D005133 3.3e-06 55.1 61 57.4
arahy.Tifrunner.gnm1.ann1.J7T2TK Arachis hypogaea HOM05D004547 ORTHO05D005133 5.6e-06 54.3 61 52.5
arahy.Tifrunner.gnm1.ann1.TL2CDN Arachis hypogaea HOM05D004547 ORTHO05D005133 5.6e-06 54.3 61 52.5


User provided reference genes

Program Settings