Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G689.16 Capsicum annuum HOM05D004520 ORTHO05D005520 6.4e-51 203.8 101 100.0
PGSC0003DMG400046169 Solanum tuberosum HOM05D004520 ORTHO05D005520 1.1e-21 106.7 64 78.1
Sabra05G0127300 Salix brachista HOM05D004520 ORTHO05D005520 1.5e-10 69.7 92 39.1
FAN18G1022 Fragaria x ananassa HOM05D004520 ORTHO05D005520 1.9e-10 69.3 72 47.2
FAN08G0369 Fragaria x ananassa HOM05D004520 ORTHO05D005520 3.2e-10 68.6 72 47.2
Manes.02G156700 Manihot esculenta HOM05D004520 ORTHO05D005520 3.2e-10 68.6 75 44.0
Potri.005G169900 Populus trichocarpa HOM05D004520 ORTHO05D005520 4.2e-10 68.2 94 39.4
FvH4_5g38160 Fragaria vesca HOM05D004520 ORTHO05D005520 7.2e-10 67.4 72 45.8
FAN13G0916 Fragaria x ananassa HOM05D004520 ORTHO05D005520 7.2e-10 67.4 70 45.7
Thecc.08G113500 Theobroma cacao HOM05D004520 ORTHO05D005520 9.4e-10 67.0 100 42.0
FAN04G0088 Fragaria x ananassa HOM05D004520 ORTHO05D005520 1.2e-09 66.6 72 45.8
CiPaw.05G232100 Carya illinoinensis HOM05D004520 ORTHO05D005520 2.7e-09 65.5 60 53.3
MD15G1409900 Malus domestica HOM05D004520 ORTHO05D005520 1.0e-08 63.5 63 50.8
Haze_00560 Corylus avellana HOM05D004520 ORTHO05D005520 1.4e-08 63.2 63 50.8
Haze_00569 Corylus avellana HOM05D004520 ORTHO05D005520 1.4e-08 63.2 63 50.8
Dinv44734 Davidia involucrata HOM05D001087 ORTHO05D001846 3.0e-08 62.0 99 36.4
Cpa.g.sc66.103 Carica papaya HOM05D004520 ORTHO05D005520 4.0e-08 61.6 71 45.1
Cfa015930 Carpinus fangiana HOM05D004520 ORTHO05D005520 4.0e-08 61.6 63 47.6
Actinidia10293 Actinidia chinensis HOM05D001087 ORTHO05D005520 8.8e-08 60.5 96 40.6
Prupe.1G510300 Prunus persica HOM05D004520 ORTHO05D005520 1.1e-07 60.1 70 41.4
Gohir.A05G230000 Gossypium hirsutum HOM05D004520 ORTHO05D005520 2.0e-07 59.3 63 44.4
Gohir.D05G232300 Gossypium hirsutum HOM05D004520 ORTHO05D005520 2.0e-07 59.3 63 44.4
Gorai.009G240500 Gossypium raimondii HOM05D004520 ORTHO05D005520 2.0e-07 59.3 63 44.4
Manes.02G156600 Manihot esculenta HOM05D004520 ORTHO05D005520 2.0e-07 59.3 69 47.8
CiPaw.05G232200 Carya illinoinensis HOM05D004520 ORTHO05D005520 3.3e-07 58.5 64 48.4
QL12p035728 Quercus lobata HOM05D004520 ORTHO05D005520 3.3e-07 58.5 69 40.6
CiPaw.06G022900 Carya illinoinensis HOM05D004520 ORTHO05D005520 4.4e-07 58.2 73 45.2
Peaxi162Scf00160g01523 Petunia axillaris HOM05D004520 ORTHO05D005520 5.7e-07 57.8 65 49.2
COL.COLO4_16493 Corchorus olitorius HOM05D004520 ORTHO05D005520 7.5e-07 57.4 99 33.3
MELO3C022817.2 Cucumis melo HOM05D004520 ORTHO05D005520 3.7e-06 55.1 70 40.0
MD15G1408400 Malus domestica HOM05D004520 ORTHO05D005520 3.7e-06 55.1 66 45.5


User provided reference genes

Program Settings