Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G686.13 Capsicum annuum HOM05D006079 ORTHO05D008156 1.0e-75 286.6 137 100.0
PGSC0003DMG400020333 Solanum tuberosum HOM05D006079 ORTHO05D008156 2.1e-68 262.3 135 93.3
Sopen09g006700 Solanum pennellii HOM05D006079 ORTHO05D008156 7.9e-68 260.4 135 91.9
Solyc09g011880.3 Solanum lycopersicum HOM05D006079 ORTHO05D008156 2.3e-67 258.8 135 91.9
Nitab4.5_0000008g0510 Nicotiana tabacum HOM05D006079 ORTHO05D008156 1.1e-66 256.5 135 91.9
Nitab4.5_0007539g0010 Nicotiana tabacum HOM05D006079 ORTHO05D008156 1.1e-66 256.5 135 91.9
Peaxi162Scf01352g00015 Petunia axillaris HOM05D006079 ORTHO05D008156 1.6e-65 252.7 135 90.4
arahy.Tifrunner.gnm1.ann1.GZPT0A Arachis hypogaea HOM05D006079 ORTHO05D008156 5.5e-61 237.7 135 82.2
arahy.Tifrunner.gnm1.ann1.3KU04F Arachis hypogaea HOM05D006079 ORTHO05D008156 1.3e-59 233.0 130 83.8
Lj2A83T75 Lonicera japonica HOM05D006079 ORTHO05D008156 2.5e-58 228.8 135 80.0
CANSAT35G1087 Cannabis sativa HOM05D006079 ORTHO05D008156 3.3e-58 228.4 134 80.6
Manes.08G086700 Manihot esculenta HOM05D006079 ORTHO05D008156 4.3e-58 228.0 138 79.7
Lj1g0026135 Lotus japonicus HOM05D006079 ORTHO05D008156 5.6e-58 227.6 128 83.6
Cpa.g.sc56.97 Carica papaya HOM05D006079 ORTHO05D008156 9.6e-58 226.9 130 82.3
QL07p036333 Quercus lobata HOM05D006079 ORTHO05D008156 1.3e-57 226.5 134 79.9
TPR.G29287 Trifolium pratense HOM05D006079 ORTHO05D008156 1.3e-57 226.5 128 81.2
Potri.006G095400 Populus trichocarpa HOM05D006079 ORTHO05D008156 1.6e-57 226.1 130 82.3
Atru.chr8.2129 Acer truncatum HOM05D006079 ORTHO05D008156 3.7e-57 224.9 128 82.0
Lalb_Chr01g0022871 Lupinus albus HOM05D006079 ORTHO05D008156 3.7e-57 224.9 134 78.4
Eucgr.B02761 Eucalyptus grandis HOM05D006079 ORTHO05D008156 6.2e-57 224.2 128 81.2
Sabra06G0073200 Salix brachista HOM05D006079 ORTHO05D008156 6.2e-57 224.2 134 79.9
MSTRG.5605 Avicennia marina HOM05D006079 ORTHO05D008156 8.2e-57 223.8 130 83.1
Psat3g135200 Pisum sativum HOM05D006079 ORTHO05D008156 8.2e-57 223.8 128 79.7
Actinidia13795 Actinidia chinensis HOM05D006079 ORTHO05D008156 1.4e-56 223.0 130 80.8
Gohir.A04G087500 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.8e-56 222.6 135 75.6
RcHm_v2.0_Chr3g0464051 Rosa chinensis HOM05D006079 ORTHO05D008156 1.8e-56 222.6 130 81.5
Dinv35521 Davidia involucrata HOM05D006079 ORTHO05D008156 2.4e-56 222.2 130 80.0
PGR031G3170 Punica granatum HOM05D006079 ORTHO05D008156 2.4e-56 222.2 128 81.2
DCAR_024040 Daucus carota HOM05D006079 ORTHO05D008156 3.1e-56 221.9 128 79.7
Glyma.07G143100 Glycine max HOM05D006079 ORTHO05D008156 3.1e-56 221.9 134 77.6
Gohir.D04G127900 Gossypium hirsutum HOM05D006079 ORTHO05D008156 3.1e-56 221.9 135 75.6
Gorai.012G110900 Gossypium raimondii HOM05D006079 ORTHO05D008156 3.1e-56 221.9 135 75.6
HanXRQChr04g0124711 Helianthus annuus HOM05D006079 ORTHO05D008156 3.1e-56 221.9 135 74.8
COL.COLO4_14632 Corchorus olitorius HOM05D006079 ORTHO05D008156 4.0e-56 221.5 130 77.7
Cfa017268 Carpinus fangiana HOM05D006079 ORTHO05D008156 5.3e-56 221.1 130 80.0
Duzib128G0993 Durio zibethinus HOM05D006079 ORTHO05D008156 5.3e-56 221.1 135 74.1
ECA236G0495 Erigeron canadensis HOM05D006079 ORTHO05D008156 5.3e-56 221.1 135 75.6
Medtr7g066250 Medicago truncatula HOM05D006079 ORTHO05D008156 5.3e-56 221.1 128 78.9
PSO585G0039 Papaver somniferum HOM05D006079 ORTHO05D008156 5.3e-56 221.1 130 80.8
TWI77G0608 Tripterygium wilfordii HOM05D006079 ORTHO05D008156 5.3e-56 221.1 138 77.5
Ciclev10011790m.g Citrus clementina HOM05D006079 ORTHO05D008156 6.9e-56 220.7 130 81.5
Haze_20934 Corylus avellana HOM05D006079 ORTHO05D008156 6.9e-56 220.7 130 80.0
CiPaw.10G153700 Carya illinoinensis HOM05D006079 ORTHO05D008156 9.0e-56 220.3 130 80.8
FAN02G2404 Fragaria x ananassa HOM05D006079 ORTHO05D008156 9.0e-56 220.3 130 80.8
Duzib093G0682 Durio zibethinus HOM05D006079 ORTHO05D008156 1.5e-55 219.5 133 75.2
PSO384G3626 Papaver somniferum HOM05D006079 ORTHO05D008156 1.5e-55 219.5 130 80.0
Phvul.008G111400 Phaseolus vulgaris HOM05D006079 ORTHO05D008156 1.5e-55 219.5 134 76.1
Thecc.05G024000 Theobroma cacao HOM05D006079 ORTHO05D008156 2.0e-55 219.2 135 74.8
FvH4_6g12250 Fragaria vesca HOM05D006079 ORTHO05D008156 2.6e-55 218.8 130 80.0
FAN09G0680 Fragaria x ananassa HOM05D006079 ORTHO05D008156 2.6e-55 218.8 130 80.0
FAN14G2872 Fragaria x ananassa HOM05D006079 ORTHO05D008156 2.6e-55 218.8 130 80.0
Migut.J00236 Erythranthe guttata HOM05D006079 ORTHO05D008156 3.4e-55 218.4 135 76.3
FAN05G0163 Fragaria x ananassa HOM05D006079 ORTHO05D008156 3.4e-55 218.4 130 80.0
Nn2g13580 Nelumbo nucifera HOM05D006079 ORTHO05D008156 3.4e-55 218.4 130 77.7
Sed0002088 Sechium edule HOM05D006079 ORTHO05D008156 3.4e-55 218.4 128 79.7
TAR633G1690 Trochodendron aralioides HOM05D006079 ORTHO05D008156 3.4e-55 218.4 130 78.5
Hma1.2p1_0763F.1_g214490 Hydrangea macrophylla HOM05D006079 ORTHO05D008156 4.5e-55 218.0 128 78.1
MD12G1158600 Malus domestica HOM05D006079 ORTHO05D008156 5.8e-55 217.6 128 79.7
Prupe.6G269000 Prunus persica HOM05D006079 ORTHO05D008156 5.8e-55 217.6 130 79.2
Aa31LG5G23170 Aethionema arabicum HOM05D006079 ORTHO05D008156 7.6e-55 217.2 128 77.3
CSS0045639 Camellia sinensis var. sinensis HOM05D006079 ORTHO05D008156 1.0e-54 216.9 130 77.7
Rhsim05G0203500 Rhododendron simsii HOM05D006079 ORTHO05D008156 1.0e-54 216.9 128 78.1
Sc25g0003370 Simmondsia chinensis HOM05D006079 ORTHO05D008156 1.0e-54 216.9 130 76.9
Ah.11g045330 Amaranthus hybridus HOM05D006079 ORTHO05D008156 1.3e-54 216.5 128 78.9
GSVIVG01034026001 Vitis vinifera HOM05D006079 ORTHO05D008156 1.3e-54 216.5 130 77.7
ClCG04G007320 Citrullus lanatus HOM05D006079 ORTHO05D008156 1.7e-54 216.1 130 78.5
Ca_09158_v3 Cicer arietinum L. HOM05D006079 ORTHO05D008156 2.2e-54 215.7 128 76.6
MELO3C003219.2 Cucumis melo HOM05D006079 ORTHO05D008156 2.2e-54 215.7 130 78.5
Aqoxy1G00752 Aquilegia oxysepala HOM05D006079 ORTHO05D008156 2.9e-54 215.3 130 76.9
CsaV3_4G025930 Cucumis sativus L. HOM05D006079 ORTHO05D008156 2.9e-54 215.3 130 77.7
SGA_v2.0_scaffold85G26780 Striga asiatica HOM05D006079 ORTHO05D008156 6.5e-54 214.2 128 77.3
Thhalv10016725m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 8.4e-54 213.8 130 76.2
Cc06_g01790 Coffea canephora HOM05D006079 ORTHO05D008156 1.1e-53 213.4 133 75.9
CARHR132560 Cardamine hirsuta HOM05D006079 ORTHO05D008156 1.9e-53 212.6 128 75.8
BcaB02g09226 Brassica carinata HOM05D006079 ORTHO05D008156 2.5e-53 212.2 130 74.6
BcaC02g11941 Brassica carinata HOM05D006079 ORTHO05D008156 2.5e-53 212.2 130 74.6
BcaC02g11943 Brassica carinata HOM05D006079 ORTHO05D008156 2.5e-53 212.2 130 74.6
BolC4t22573H Brassica oleracea HOM05D006079 ORTHO05D008156 2.5e-53 212.2 130 74.6
Sp4g20320 Schrenkiella parvula HOM05D006079 ORTHO05D008156 2.5e-53 212.2 130 74.6
A05p08000 Brassica napus HOM05D006079 ORTHO05D008156 3.2e-53 211.8 128 75.0
BraA05t19766Z Brassica rapa HOM05D006079 ORTHO05D008156 3.2e-53 211.8 128 75.0
THA.LOC104823390 Tarenaya hassleriana HOM05D006079 ORTHO05D008156 9.3e-53 210.3 130 73.8
AL4G34980 Arabidopsis lyrata HOM05D006079 ORTHO05D008156 1.6e-52 209.5 130 73.8
Carub.0004s1997 Capsella rubella HOM05D006079 ORTHO05D008156 1.6e-52 209.5 130 73.8
AT2G38000 Arabidopsis thaliana HOM05D006079 ORTHO05D008156 2.1e-52 209.1 128 74.2
BcaB02g09227 Brassica carinata HOM05D006079 ORTHO05D008156 7.9e-52 207.2 122 76.2
CDE07G0746 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 1.3e-51 206.5 135 74.1
MBI05_g36624_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 1.3e-51 206.5 130 76.9
EL10Ac5g11535 Beta vulgaris HOM05D006079 ORTHO05D008156 3.7e-49 198.4 128 75.0
CDE04G0224 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 1.1e-48 196.8 136 69.1
ATR0618G129 Amborella trichopoda HOM05D006079 ORTHO05D008156 5.3e-48 194.5 129 69.0
HPP92_006654 Vanilla planifolia HOM05D006079 ORTHO05D008156 6.9e-48 194.1 128 74.2
Zm00001eb169630 Zea mays HOM05D006079 ORTHO05D008156 1.2e-44 183.3 125 69.6
Os05g0316200 Oryza sativa ssp. japonica HOM05D006079 ORTHO05D008156 2.1e-44 182.6 128 66.4
Oeu015011.1 Olea europaea HOM05D006079 ORTHO05D008156 6.7e-43 177.6 110 80.0
Actinidia29142 Actinidia chinensis HOM05D006079 ORTHO05D008156 5.7e-42 174.5 121 72.7
C04p09660 Brassica napus HOM05D006079 ORTHO05D008156 1.3e-41 173.3 111 73.0
Migut.J00237 Erythranthe guttata HOM05D006079 ORTHO05D008156 1.8e-40 169.5 130 61.5
SEGI_08405 Sequoiadendron giganteum HOM05D006079 ORTHO05D008156 4.1e-40 168.3 128 64.8
unitig_26.g9105 Utricularia gibba HOM05D006079 ORTHO05D008156 9.1e-40 167.2 119 67.2
AUR62041356 Chenopodium quinoa HOM05D006079 ORTHO05D008156 1.0e-38 163.7 103 77.7
vmacro20226 Vaccinium macrocarpon HOM05D006079 ORTHO05D008156 6.1e-36 154.5 89 78.7
AagrBONN_evm.TU.Sc2ySwM_117.3694 Anthoceros agrestis HOM05D006079 ORTHO05D008156 3.0e-35 152.1 126 60.3
Lsat_1_v5_gn_8_82341 Lactuca sativa HOM05D006079 ORTHO05D008156 7.4e-34 147.5 113 65.5
VMungo1383G1007 Vigna mungo HOM05D006079 ORTHO05D008156 2.0e-31 139.4 87 74.7
TAR636G2503 Trochodendron aralioides HOM05D006079 ORTHO05D008156 9.4e-29 130.6 82 76.8
Pp3c16_16710 Physcomitrium patens HOM05D006079 ORTHO05D008156 1.4e-27 126.7 118 49.2
SMO172G0100 Selaginella moellendorffii HOM05D006079 ORTHO05D008156 7.4e-26 120.9 120 54.2
Mapoly0040s0094 Marchantia polymorpha HOM05D006079 ORTHO05D008156 2.4e-24 115.9 118 48.3
Gohir.A13G086740 Gossypium hirsutum HOM05D006079 ORTHO05D008156 4.5e-23 111.7 70 71.4
Cc02_g12960 Coffea canephora HOM05D006079 ORTHO05D008156 5.5e-21 104.8 77 64.9
Thhalv10017300m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 3.2e-13 79.0 124 38.7


User provided reference genes

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