Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G686.11 Capsicum annuum HOM05D008437 ORTHO05D010577 7.2e-109 397.1 182 100.0
PGSC0003DMG400046101 Solanum tuberosum HOM05D008437 ORTHO05D010577 3.4e-74 282.0 177 73.4
Sopen03g021420 Solanum pennellii HOM05D008437 ORTHO05D010577 5.7e-74 281.2 177 72.3
Sopen09g006830 Solanum pennellii HOM05D008437 ORTHO05D010577 2.8e-73 278.9 177 71.8
Solyc03g078530.1 Solanum lycopersicum HOM05D008437 ORTHO05D010577 4.8e-73 278.1 177 71.8
Solyc09g012010.1 Solanum lycopersicum HOM05D008437 ORTHO05D010577 2.7e-71 272.3 177 70.1
Nitab4.5_0000008g0620 Nicotiana tabacum HOM05D008437 ORTHO05D010577 5.0e-70 268.1 176 71.0
Peaxi162Scf00141g00118 Petunia axillaris HOM05D008437 ORTHO05D010577 7.5e-66 254.2 176 68.8
Nitab4.5_0004827g0010 Nicotiana tabacum HOM05D008437 ORTHO05D010577 6.3e-65 251.1 176 67.0
Peaxi162Scf00141g00138 Petunia axillaris HOM05D008437 ORTHO05D010577 3.1e-64 248.8 176 64.2
Sopen09g006840 Solanum pennellii HOM05D008437 ORTHO05D010577 1.8e-56 223.0 180 60.0
Solyc09g012020.1 Solanum lycopersicum HOM05D008437 ORTHO05D010577 1.2e-55 220.3 180 59.4
Sopen09g006880 Solanum pennellii HOM05D008437 ORTHO05D010577 1.6e-52 209.9 174 57.5
Sopen09g006900 Solanum pennellii HOM05D008437 ORTHO05D010577 3.1e-51 205.7 174 56.3
Sopen05g009680 Solanum pennellii HOM05D008437 ORTHO05D010577 6.8e-51 204.5 166 59.0
CAN.G284.5 Capsicum annuum HOM05D008437 ORTHO05D010577 4.3e-45 185.3 145 62.1
Hma1.2p1_0244F.1_g101190 Hydrangea macrophylla HOM05D008437 ORTHO05D010577 3.6e-44 182.2 177 49.2
Rhsim05G0205500 Rhododendron simsii HOM05D008437 ORTHO05D010577 1.3e-41 173.7 169 47.3
Atru.chr8.2149 Acer truncatum HOM05D008437 ORTHO05D010577 3.0e-38 162.5 169 45.6
Atru.chr8.2191 Acer truncatum HOM05D008437 ORTHO05D010577 3.0e-38 162.5 169 45.0
Atru.chr8.2192 Acer truncatum HOM05D008437 ORTHO05D010577 5.1e-38 161.8 164 46.3
QL07p036071 Quercus lobata HOM05D008437 ORTHO05D010577 6.6e-38 161.4 169 46.2
Atru.chr8.2150 Acer truncatum HOM05D008437 ORTHO05D010577 8.6e-38 161.0 164 45.7
DCAR_028831 Daucus carota HOM05D008437 ORTHO05D010577 2.5e-37 159.5 168 42.9
Thecc.05G022700 Theobroma cacao HOM05D008437 ORTHO05D010577 4.3e-37 158.7 165 46.7
CSS0044623 Camellia sinensis var. sinensis HOM05D008437 ORTHO05D010577 8.9e-35 151.0 167 43.7
Atru.chr8.2190 Acer truncatum HOM05D008437 ORTHO05D010577 2.0e-34 149.8 165 42.4
COL.COLO4_14612 Corchorus olitorius HOM05D006607 ORTHO05D008166 3.4e-34 149.1 158 44.3
Atru.chr8.2145 Acer truncatum HOM05D008437 ORTHO05D010577 2.2e-33 146.4 168 41.1
Aqoxy1G00725 Aquilegia oxysepala HOM05D008437 ORTHO05D010577 2.2e-33 146.4 167 40.1
COL.COLO4_14611 Corchorus olitorius HOM05D008437 ORTHO05D010577 3.5e-31 139.0 156 42.3
COL.COLO4_27629 Corchorus olitorius HOM05D008437 ORTHO05D010577 4.6e-31 138.7 161 42.2
Gohir.D05G386150 Gossypium hirsutum HOM05D008437 ORTHO05D010577 1.0e-30 137.5 189 39.7
Gorai.009G452600 Gossypium raimondii HOM05D008437 ORTHO05D010577 3.0e-30 136.0 189 39.7
Gohir.A04G003750 Gossypium hirsutum HOM05D008437 ORTHO05D010577 9.6e-29 131.0 189 38.1
Solyc03g078560.1 Solanum lycopersicum HOM05D008437 ORTHO05D010577 1.4e-27 127.1 120 50.8
CANSAT35G0292 Cannabis sativa HOM05D008437 ORTHO05D010577 4.2e-24 115.5 165 38.2
Atru.chr8.2185 Acer truncatum HOM05D008437 ORTHO05D010577 9.3e-24 114.4 135 43.0
Gorai.009G452800 Gossypium raimondii HOM05D008437 ORTHO05D010577 1.2e-23 114.0 139 41.0
Atru.chr8.2143 Acer truncatum HOM05D008437 ORTHO05D010577 3.5e-23 112.5 135 42.2
Actinidia13782 Actinidia chinensis HOM05D008437 ORTHO05D010577 1.1e-19 100.9 104 45.2
CANSAT35G0930 Cannabis sativa HOM05D008437 ORTHO05D010577 6.4e-17 91.7 167 33.5
ECA238G0023 Erigeron canadensis HOM05D012740 ORTHO05D010577 1.4e-16 90.5 174 31.6
Hma1.2p1_0026F.1_g016960 Hydrangea macrophylla HOM05D012740 ORTHO05D010577 2.7e-15 86.3 181 31.5
MD15G1404600 Malus domestica HOM05D007726 ORTHO05D008819 4.6e-15 85.5 171 32.7
Lsat_1_v5_gn_2_120520 Lactuca sativa HOM05D012740 ORTHO05D010577 8.7e-14 81.3 181 31.5
Cfa012989 Carpinus fangiana HOM05D007726 ORTHO05D008819 1.5e-13 80.5 165 30.9
Nn2g13599 Nelumbo nucifera HOM05D008437 ORTHO05D008819 1.5e-13 80.5 172 30.2
PSO339G1195 Papaver somniferum HOM05D007726 ORTHO05D008819 1.5e-13 80.5 170 31.8
Nn8g40182 Nelumbo nucifera HOM05D008437 ORTHO05D008819 1.9e-13 80.1 168 31.5
TAR381G1565 Trochodendron aralioides HOM05D007726 ORTHO05D008819 3.3e-13 79.3 172 33.7
CANSAT25G2565 Cannabis sativa HOM05D007726 ORTHO05D008819 4.3e-13 79.0 171 29.8
Cpa.g.sc30.96 Carica papaya HOM05D007726 ORTHO05D008819 4.3e-13 79.0 171 31.6
Haze_21347 Corylus avellana HOM05D007726 ORTHO05D008819 4.3e-13 79.0 165 30.3
Haze_21353 Corylus avellana HOM05D007726 ORTHO05D008819 4.3e-13 79.0 165 30.3
CiPaw.08G003800 Carya illinoinensis HOM05D007726 ORTHO05D008819 1.6e-12 77.0 163 30.7
Lsat_1_v5_gn_2_120541 Lactuca sativa HOM05D012740 ORTHO05D010577 1.6e-12 77.0 165 27.9
QL02p023649 Quercus lobata HOM05D007726 ORTHO05D008819 2.8e-12 76.3 168 31.5
Hund16766 Selenicereus undatus HOM05D007726 ORTHO05D008819 3.6e-12 75.9 180 31.7
CiPaw.07G234400 Carya illinoinensis HOM05D007726 ORTHO05D008819 4.8e-12 75.5 163 30.1
Cc10_g11210 Coffea canephora HOM05D007726 ORTHO05D008819 8.1e-12 74.7 169 28.4
Dinv41784 Davidia involucrata HOM05D007726 ORTHO05D008819 8.1e-12 74.7 169 30.2
Dinv24637 Davidia involucrata HOM05D007726 ORTHO05D008819 1.1e-11 74.3 172 30.2
RcHm_v2.0_Chr7g0226391 Rosa chinensis HOM05D007726 ORTHO05D008819 1.1e-11 74.3 172 34.3
Lj7A388T90 Lonicera japonica HOM05D007726 ORTHO05D008819 1.4e-11 73.9 169 30.8
Actinidia34726 Actinidia chinensis HOM05D007726 ORTHO05D008819 1.8e-11 73.6 169 29.0
PGSC0003DMG400020354 Solanum tuberosum HOM05D000312 ORTHO05D000221 1.8e-11 73.6 58 58.6
Actinidia22323 Actinidia chinensis HOM05D007726 ORTHO05D008819 4.0e-11 72.4 167 31.1
Ciclev10020327m.g Citrus clementina HOM05D007726 ORTHO05D008819 4.0e-11 72.4 166 30.1
Prupe.1G556700 Prunus persica HOM05D007726 ORTHO05D008819 5.3e-11 72.0 171 28.7
Ciclev10020371m.g Citrus clementina HOM05D007726 ORTHO05D008819 9.0e-11 71.2 165 29.1
RcHm_v2.0_Chr7g0225531 Rosa chinensis HOM05D007726 ORTHO05D008819 9.0e-11 71.2 171 29.8
Actinidia13258 Actinidia chinensis HOM05D007726 ORTHO05D008819 4.5e-10 68.9 167 26.9
FAN13G1334 Fragaria x ananassa HOM05D007726 ORTHO05D008819 5.8e-10 68.6 172 30.8
Hund16767 Selenicereus undatus HOM05D007726 ORTHO05D008819 9.9e-10 67.8 168 28.0
Rhsim02G0204800 Rhododendron simsii HOM05D007726 ORTHO05D008819 1.3e-09 67.4 169 29.6
Lj7C388T5 Lonicera japonica HOM05D007726 ORTHO05D008819 1.7e-09 67.0 169 28.4
CSS0013132 Camellia sinensis var. sinensis HOM05D007726 ORTHO05D008819 2.2e-09 66.6 167 26.9
Lsat_1_v5_gn_4_28421 Lactuca sativa HOM05D007726 ORTHO05D008819 3.8e-09 65.9 169 27.8
Sabra13G0090000 Salix brachista HOM05D007726 ORTHO05D008819 4.9e-09 65.5 163 27.6
PSO384G2295 Papaver somniferum HOM05D007726 ORTHO05D008819 6.4e-09 65.1 170 29.4
ECA234G1595 Erigeron canadensis HOM05D007726 ORTHO05D008819 8.4e-09 64.7 168 26.8
AUR62023529 Chenopodium quinoa HOM05D007726 ORTHO05D008819 1.1e-08 64.3 171 28.1
Oeu000542.1 Olea europaea HOM05D007726 ORTHO05D008819 1.9e-08 63.5 166 29.5
Potri.013G104100 Populus trichocarpa HOM05D007726 ORTHO05D008819 2.4e-08 63.2 163 27.0
CSS0041692 Camellia sinensis var. sinensis HOM05D007726 ORTHO05D008819 3.2e-08 62.8 169 28.4
CSS0044196 Camellia sinensis var. sinensis HOM05D007726 ORTHO05D008819 3.2e-08 62.8 169 28.4
MSTRG.25451 Avicennia marina HOM05D007726 ORTHO05D008819 4.2e-08 62.4 174 29.9
EL10Ac1g00153 Beta vulgaris HOM05D007726 ORTHO05D008819 5.5e-08 62.0 174 25.9
TAR371G0093 Trochodendron aralioides HOM05D000007 ORTHO05D007252 7.1e-08 61.6 188 25.0
Lsat_1_v5_gn_6_37720 Lactuca sativa HOM05D012740 ORTHO05D010577 1.6e-07 60.5 144 29.2
Eucgr.F02895 Eucalyptus grandis HOM05D007726 ORTHO05D008819 2.1e-07 60.1 171 26.3
AUR62004583 Chenopodium quinoa HOM05D007726 ORTHO05D008819 3.5e-07 59.3 171 28.1
TAR371G0292 Trochodendron aralioides HOM05D000007 ORTHO05D007252 6.0e-07 58.5 182 25.3
TAR371G0430 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.8e-06 57.0 182 25.3
HanXRQChr17g0558011 Helianthus annuus HOM05D007726 ORTHO05D008819 3.0e-06 56.2 165 26.7
HanXRQChr17g0565271 Helianthus annuus HOM05D007726 ORTHO05D008819 3.0e-06 56.2 131 29.8
Nn1g03296 Nelumbo nucifera HOM05D000007 ORTHO05D003666 3.9e-06 55.8 179 27.9
Lsat_1_v5_gn_8_140181 Lactuca sativa HOM05D007726 ORTHO05D008819 8.7e-06 54.7 165 26.1
Lj3P149T27 Lonicera japonica HOM05D008999 ORTHO05D010908 8.7e-06 54.7 163 33.7
TAR629G0100 Trochodendron aralioides HOM05D008437 ORTHO05D008819 8.7e-06 54.7 171 28.7


User provided reference genes

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