Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G681.52 Capsicum annuum HOM05D007934 ORTHO05D010067 1.0e-58 229.9 125 100.0
PGSC0003DMG400006568 Solanum tuberosum HOM05D007934 ORTHO05D010067 4.0e-50 201.4 122 87.7
Solyc09g098115.1 Solanum lycopersicum HOM05D007934 ORTHO05D010067 1.3e-48 196.4 122 83.6
Sopen09g036060 Solanum pennellii HOM05D007934 ORTHO05D010067 1.3e-48 196.4 122 83.6
Thecc.04G187000 Theobroma cacao HOM05D007934 ORTHO05D010067 6.8e-34 147.5 121 64.5
Dinv27156 Davidia involucrata HOM05D007934 ORTHO05D010067 1.2e-33 146.7 116 67.2
RcHm_v2.0_Chr4g0410771 Rosa chinensis HOM05D007934 ORTHO05D010067 1.3e-32 143.3 116 65.5
Cfa008702 Carpinus fangiana HOM05D007934 ORTHO05D010067 4.9e-32 141.4 118 62.7
Duzib268G0160 Durio zibethinus HOM05D007934 ORTHO05D010067 4.9e-32 141.4 119 62.2
COL.COLO4_06792 Corchorus olitorius HOM05D007934 ORTHO05D010067 8.3e-32 140.6 121 62.8
CSS0014535 Camellia sinensis var. sinensis HOM05D007934 ORTHO05D010067 1.4e-31 139.8 116 66.4
Medtr7g021860 Medicago truncatula HOM05D007934 ORTHO05D010067 1.8e-31 139.4 116 63.8
QL06p027793 Quercus lobata HOM05D007934 ORTHO05D010067 1.8e-31 139.4 116 63.8
MD04G1026300 Malus domestica HOM05D007934 ORTHO05D010067 2.4e-31 139.0 122 63.1
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 2.4e-31 139.0 116 63.8
Psat3g187720 Pisum sativum HOM05D007934 ORTHO05D010067 3.1e-31 138.7 118 61.0
Lj1g0008563 Lotus japonicus HOM05D007934 ORTHO05D010067 4.1e-31 138.3 116 62.1
Lalb_Chr10g0092091 Lupinus albus HOM05D007934 ORTHO05D010067 4.1e-31 138.3 119 63.0
DCAR_010060 Daucus carota HOM05D007934 ORTHO05D010067 7.0e-31 137.5 121 62.8
FvH4_4g12460 Fragaria vesca HOM05D007934 ORTHO05D010067 7.0e-31 137.5 116 64.7
FAN12G0351 Fragaria x ananassa HOM05D007934 ORTHO05D010067 7.0e-31 137.5 116 64.7
Phvul.008G084200 Phaseolus vulgaris HOM05D007934 ORTHO05D010067 1.2e-30 136.7 124 55.6
FAN17G0103 Fragaria x ananassa HOM05D007934 ORTHO05D010067 1.6e-30 136.3 129 61.2
Prupe.1G176000 Prunus persica HOM05D007934 ORTHO05D010067 1.6e-30 136.3 120 62.5
Prupe.2G050500 Prunus persica HOM05D007934 ORTHO05D010067 1.6e-30 136.3 120 62.5
Glyma.09G276700 Glycine max HOM05D007934 ORTHO05D010067 2.7e-30 135.6 116 60.3
Sabra14G0111200 Salix brachista HOM05D007934 ORTHO05D010067 2.7e-30 135.6 129 61.2
Manes.13G117300 Manihot esculenta HOM05D007934 ORTHO05D010067 3.5e-30 135.2 116 63.8
CiPaw.02G060500 Carya illinoinensis HOM05D007934 ORTHO05D010067 7.8e-30 134.0 116 62.9
CANSAT78G1949 Cannabis sativa HOM05D007934 ORTHO05D010067 1.3e-29 133.3 120 60.0
Atru.chr2.1662 Acer truncatum HOM05D007934 ORTHO05D010067 5.0e-29 131.3 119 60.5
Aqoxy2G00204 Aquilegia oxysepala HOM05D007934 ORTHO05D010067 6.6e-29 131.0 115 60.9
Atru.chr2.1676 Acer truncatum HOM05D007934 ORTHO05D010067 2.5e-28 129.0 119 59.7
Ciclev10033502m.g Citrus clementina HOM05D007934 ORTHO05D010067 9.5e-28 127.1 118 55.9
AT1G10800 Arabidopsis thaliana HOM05D007934 ORTHO05D010067 3.0e-26 122.1 119 52.1
Nn1g08266 Nelumbo nucifera HOM05D007934 ORTHO05D010067 3.0e-26 122.1 116 56.9
MBI07_g12253_MAGBIO Magnolia biondii HOM05D007934 ORTHO05D010067 4.0e-26 121.7 115 58.3
Lsat_1_v5_gn_6_58060 Lactuca sativa HOM05D007934 ORTHO05D010067 1.2e-25 120.2 116 57.8
BcaC05g24952 Brassica carinata HOM05D007934 ORTHO05D010067 1.5e-25 119.8 119 51.3
Thhalv10009458m.g Eutrema salsugineum HOM05D007934 ORTHO05D010067 2.0e-25 119.4 121 49.6
BolC5t29659H Brassica oleracea HOM05D007934 ORTHO05D010067 2.6e-25 119.0 119 49.6
THA.LOC104809589 Tarenaya hassleriana HOM05D007934 ORTHO05D010067 4.4e-25 118.2 118 55.1
VMungo1383G3460 Vigna mungo HOM05D007934 ORTHO05D010067 5.8e-25 117.9 116 52.6
C05p09150 Brassica napus HOM05D007934 ORTHO05D010067 7.5e-25 117.5 119 48.7
HanXRQChr11g0341381 Helianthus annuus HOM05D007934 ORTHO05D010067 9.8e-25 117.1 117 59.0
Ah.04g149820 Amaranthus hybridus HOM05D007934 ORTHO05D010067 1.3e-24 116.7 115 53.0
CARHR011020 Cardamine hirsuta HOM05D007934 ORTHO05D010067 1.3e-24 116.7 117 51.3
Carub.0001s1035 Capsella rubella HOM05D007934 ORTHO05D010067 1.7e-24 116.3 117 53.8
A06p07590 Brassica napus HOM05D007934 ORTHO05D010067 1.1e-23 113.6 119 48.7
BraA06t23961Z Brassica rapa HOM05D007934 ORTHO05D010067 1.1e-23 113.6 119 48.7
Actinidia32959 Actinidia chinensis HOM05D007934 ORTHO05D010067 1.4e-23 113.2 95 63.2
Sp1g09500 Schrenkiella parvula HOM05D007934 ORTHO05D010067 1.9e-23 112.8 119 48.7
AL1G21730 Arabidopsis lyrata HOM05D007934 ORTHO05D010067 2.7e-22 109.0 119 48.7
PGR142G0659 Punica granatum HOM05D007934 ORTHO05D010067 1.3e-21 106.7 95 57.9
AUR62026200 Chenopodium quinoa HOM05D007934 ORTHO05D010067 2.3e-21 105.9 98 56.1
ClCG08G003680 Citrullus lanatus HOM05D007934 ORTHO05D010067 2.3e-21 105.9 111 55.0
FAN07G0267 Fragaria x ananassa HOM05D007934 ORTHO05D010067 5.0e-21 104.8 129 53.5
MELO3C026115.2 Cucumis melo HOM05D007934 ORTHO05D010067 7.3e-20 100.9 118 50.8
Gohir.D05G327600 Gossypium hirsutum HOM05D007934 ORTHO05D010067 3.6e-19 98.6 124 48.4
Gorai.009G351500 Gossypium raimondii HOM05D007934 ORTHO05D010067 6.2e-19 97.8 124 48.4
Eucgr.H00465 Eucalyptus grandis HOM05D007934 ORTHO05D010067 8.0e-19 97.4 79 63.3
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 3.1e-18 95.5 114 43.9
Potri.014G147600 Populus trichocarpa HOM05D007934 ORTHO05D010067 4.0e-18 95.1 74 68.9
Gohir.A05G327400 Gossypium hirsutum HOM05D007934 ORTHO05D010067 4.4e-17 91.7 124 46.8
SEGI_13791 Sequoiadendron giganteum HOM05D007934 ORTHO05D010067 1.3e-16 90.1 122 38.5
TAR636G3543 Trochodendron aralioides HOM05D007934 ORTHO05D010067 2.4e-15 85.9 65 70.8
SMO356G0271 Selaginella moellendorffii HOM05D007934 ORTHO05D010067 1.2e-14 83.6 115 41.7
Mapoly0034s0074 Marchantia polymorpha HOM05D007934 ORTHO05D010067 6.0e-14 81.3 108 41.7
AUR62018491 Chenopodium quinoa HOM05D007934 ORTHO05D010879 1.3e-13 80.1 64 64.1
PSO170G0593 Papaver somniferum HOM05D007934 ORTHO05D010067 3.9e-13 78.6 77 57.1
AagrBONN_evm.TU.Sc2ySwM_368.2439 Anthoceros agrestis HOM05D007934 ORTHO05D010067 1.5e-12 76.6 112 35.7
Mapoly0007s0045 Marchantia polymorpha HOM05D007934 ORTHO05D010067 6.2e-11 71.2 109 35.8
Pp3c2_28920 Physcomitrium patens HOM05D007934 ORTHO05D010067 8.1e-11 70.9 86 44.2
Pp3c2_28960 Physcomitrium patens HOM05D007934 ORTHO05D010067 8.1e-11 70.9 86 44.2
Mapoly0012s0008 Marchantia polymorpha HOM05D007934 ORTHO05D010067 1.4e-10 70.1 83 44.6
Pp3c7_26640 Physcomitrium patens HOM05D007934 ORTHO05D010067 2.0e-09 66.2 118 36.4
Cfa002814 Carpinus fangiana HOM05D007934 ORTHO05D010067 1.7e-08 63.2 53 62.3


User provided reference genes

Program Settings