Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G680.23 Capsicum annuum HOM05D000215 ORTHO05D115850 1.2e-39 166.0 79 100.0
CAN.G184.43 Capsicum annuum HOM05D000215 ORTHO05D003454 1.1e-18 96.3 144 44.4
Solyc05g005670.1 Solanum lycopersicum HOM05D000215 ORTHO05D003454 6.9e-16 87.0 47 87.2
Sopen05g001670 Solanum pennellii HOM05D000215 ORTHO05D003454 6.9e-16 87.0 47 87.2
PGSC0003DMG400040429 Solanum tuberosum HOM05D000215 ORTHO05D003454 1.2e-15 86.3 47 85.1
Nitab4.5_0002579g0040 Nicotiana tabacum HOM05D000215 ORTHO05D003454 6.4e-14 80.5 47 80.9
Nitab4.5_0000113g0160 Nicotiana tabacum HOM05D000215 ORTHO05D003454 1.4e-13 79.3 47 83.0
Peaxi162Scf00338g00001 Petunia axillaris HOM05D000215 ORTHO05D003454 3.5e-12 74.7 47 74.5
Oeu001742.1 Olea europaea HOM05D000215 ORTHO05D003454 1.9e-10 68.9 46 71.7
Lj6P804T36 Lonicera japonica HOM05D000215 ORTHO05D003454 4.3e-10 67.8 46 65.2
Haze_07494 Corylus avellana HOM05D000198 ORTHO05D003454 9.6e-10 66.6 45 71.1
ECA233G0075 Erigeron canadensis HOM05D000215 ORTHO05D003454 9.6e-10 66.6 46 65.2
FAN22G2389 Fragaria x ananassa HOM05D000215 ORTHO05D003454 1.3e-09 66.2 46 65.2
Oeu041560.1 Olea europaea HOM05D000215 ORTHO05D003454 1.6e-09 65.9 45 71.1
Cc11_g14570 Coffea canephora HOM05D000215 ORTHO05D003454 2.1e-09 65.5 47 61.7
Cfa019096 Carpinus fangiana HOM05D000215 ORTHO05D003454 2.8e-09 65.1 45 71.1
FAN07G1479 Fragaria x ananassa HOM05D000215 ORTHO05D003454 2.8e-09 65.1 46 63.0
FAN17G0144 Fragaria x ananassa HOM05D000215 ORTHO05D003454 2.8e-09 65.1 45 66.7
CiPaw.05G150000 Carya illinoinensis HOM05D000215 ORTHO05D003454 4.8e-09 64.3 52 61.5
Duzib205G0533 Durio zibethinus HOM05D000215 ORTHO05D003454 4.8e-09 64.3 45 68.9
RcHm_v2.0_Chr4g0443981 Rosa chinensis HOM05D000215 ORTHO05D003454 4.8e-09 64.3 46 63.0
CANSAT80G2714 Cannabis sativa HOM05D000215 ORTHO05D003454 6.2e-09 63.9 64 50.0
QL10p012119 Quercus lobata HOM05D000215 ORTHO05D003454 8.1e-09 63.5 45 66.7
Sopen03g033230 Solanum pennellii HOM05D000215 ORTHO05D003454 8.1e-09 63.5 45 64.4
FAN12G0634 Fragaria x ananassa HOM05D000215 ORTHO05D003454 1.1e-08 63.2 46 58.7
TAR629G3507 Trochodendron aralioides HOM05D000215 ORTHO05D003454 1.1e-08 63.2 45 64.4
Cpa.g.sc124.37 Carica papaya HOM05D000215 ORTHO05D003454 1.4e-08 62.8 45 62.2
Eucgr.B00358 Eucalyptus grandis HOM05D000215 ORTHO05D003454 1.4e-08 62.8 46 60.9
Gohir.D12G274000 Gossypium hirsutum HOM05D000215 ORTHO05D003454 1.4e-08 62.8 45 66.7
COL.COLO4_34053 Corchorus olitorius HOM05D000215 ORTHO05D003454 1.8e-08 62.4 46 63.0
Manes.06G103300 Manihot esculenta HOM05D000215 ORTHO05D003454 1.8e-08 62.4 45 62.2
Nn3g16912 Nelumbo nucifera HOM05D000215 ORTHO05D003454 1.8e-08 62.4 46 56.5
RcHm_v2.0_Chr7g0193831 Rosa chinensis HOM05D000215 ORTHO05D003454 1.8e-08 62.4 45 64.4
Ciclev10019147m.g Citrus clementina HOM05D000215 ORTHO05D003454 2.4e-08 62.0 46 56.5
Cc04_g12840 Coffea canephora HOM05D000215 ORTHO05D003454 2.4e-08 62.0 46 60.9
Migut.E00160 Erythranthe guttata HOM05D000215 ORTHO05D003454 2.4e-08 62.0 45 66.7
Lsat_1_v5_gn_8_159821 Lactuca sativa HOM05D000215 ORTHO05D003454 2.4e-08 62.0 46 58.7
Sabra15G0098200 Salix brachista HOM05D000215 ORTHO05D003454 2.4e-08 62.0 45 64.4
Solyc03g114160.1 Solanum lycopersicum HOM05D000215 ORTHO05D003454 2.4e-08 62.0 45 64.4
Potri.015G074200 Populus trichocarpa HOM05D000215 ORTHO05D003454 3.1e-08 61.6 45 64.4
PGSC0003DMG400024491 Solanum tuberosum HOM05D000215 ORTHO05D003454 3.1e-08 61.6 45 64.4
CAN.G781.30 Capsicum annuum HOM05D000215 ORTHO05D003454 4.0e-08 61.2 46 60.9
Eucgr.H02615 Eucalyptus grandis HOM05D000215 ORTHO05D003454 4.0e-08 61.2 47 61.7
FvH4_5g05140 Fragaria vesca HOM05D000215 ORTHO05D003454 4.0e-08 61.2 45 64.4
FAN13G1165 Fragaria x ananassa HOM05D000215 ORTHO05D003454 4.0e-08 61.2 45 62.2
FAN18G1564 Fragaria x ananassa HOM05D000215 ORTHO05D003454 4.0e-08 61.2 45 64.4
FAN18G3289 Fragaria x ananassa HOM05D000215 ORTHO05D003454 4.0e-08 61.2 45 64.4
Gorai.008G294400 Gossypium raimondii HOM05D000215 ORTHO05D003454 4.0e-08 61.2 45 64.4
MD16G1091300 Malus domestica HOM05D000215 ORTHO05D003454 4.0e-08 61.2 45 64.4
SGA_v2.0_scaffold87G27030 Striga asiatica HOM05D000215 ORTHO05D003454 4.0e-08 61.2 45 64.4
Thecc.03G009700 Theobroma cacao HOM05D000215 ORTHO05D003454 4.0e-08 61.2 45 64.4
TWI60G1064 Tripterygium wilfordii HOM05D000215 ORTHO05D003454 4.0e-08 61.2 50 62.0
CANSAT01G0385 Cannabis sativa HOM05D000215 ORTHO05D003454 5.3e-08 60.8 45 60.0
ClCG01G013020 Citrullus lanatus HOM05D000215 ORTHO05D003454 5.3e-08 60.8 47 61.7
Manes.13G031100 Manihot esculenta HOM05D000215 ORTHO05D003454 5.3e-08 60.8 45 62.2
Nitab4.5_0003857g0040 Nicotiana tabacum HOM05D000215 ORTHO05D003454 5.3e-08 60.8 45 64.4
FvH4_4g34620 Fragaria vesca HOM05D000215 ORTHO05D003454 6.9e-08 60.5 46 56.5
FAN08G0733 Fragaria x ananassa HOM05D000215 ORTHO05D003454 6.9e-08 60.5 45 60.0
Gohir.A12G273300 Gossypium hirsutum HOM05D000215 ORTHO05D003454 6.9e-08 60.5 45 64.4
PGR083G1090 Punica granatum HOM05D000215 ORTHO05D003454 6.9e-08 60.5 46 60.9
TWI75G0857 Tripterygium wilfordii HOM05D000215 ORTHO05D003454 6.9e-08 60.5 46 60.9
Cfa009134 Carpinus fangiana HOM05D000215 ORTHO05D003454 9.0e-08 60.1 45 60.0
Atru.chr11.2006 Acer truncatum HOM05D000215 ORTHO05D003454 1.2e-07 59.7 46 58.7
CSS0025946 Camellia sinensis var. sinensis HOM05D000215 ORTHO05D003454 1.2e-07 59.7 45 60.0
CSS0030448 Camellia sinensis var. sinensis HOM05D000215 ORTHO05D003454 1.2e-07 59.7 45 60.0
CsaV3_1G008380 Cucumis sativus L. HOM05D000215 ORTHO05D003454 1.2e-07 59.7 45 64.4
Rhsim12G0121400 Rhododendron simsii HOM05D000215 ORTHO05D003454 1.2e-07 59.7 45 60.0
Hma1.2p1_0867F.1_g230280 Hydrangea macrophylla HOM05D000215 ORTHO05D003454 1.5e-07 59.3 46 56.5
Haze_12167 Corylus avellana HOM05D000215 ORTHO05D003454 2.0e-07 58.9 45 60.0
Glyma.06G183800 Glycine max HOM05D000215 ORTHO05D003454 2.0e-07 58.9 45 53.3
Hma1.2p1_0176F.1_g077670 Hydrangea macrophylla HOM05D000215 ORTHO05D003454 2.0e-07 58.9 45 62.2
Ciclev10030876m.g Citrus clementina HOM05D000215 ORTHO05D003454 2.6e-07 58.5 45 57.8
FAN04G0026 Fragaria x ananassa HOM05D000215 ORTHO05D003454 2.6e-07 58.5 45 60.0
MELO3C002253.2 Cucumis melo HOM05D000215 ORTHO05D003454 3.4e-07 58.2 45 64.4
Dinv15311 Davidia involucrata HOM05D000215 ORTHO05D003454 3.4e-07 58.2 45 57.8
Manes.12G029900 Manihot esculenta HOM05D000215 ORTHO05D003454 4.5e-07 57.8 45 60.0
QL03p061551 Quercus lobata HOM05D000215 ORTHO05D003454 4.5e-07 57.8 48 58.3
THA.LOC104809271 Tarenaya hassleriana HOM05D000215 ORTHO05D003454 4.5e-07 57.8 45 62.2
CAN.G610.3 Capsicum annuum HOM05D000215 ORTHO05D003454 7.6e-07 57.0 33 90.9
AUR62014020 Chenopodium quinoa HOM05D000215 ORTHO05D003454 7.6e-07 57.0 46 54.3
MD06G1177100 Malus domestica HOM05D000215 ORTHO05D003454 7.6e-07 57.0 46 60.9
Phvul.003G199200 Phaseolus vulgaris HOM05D000215 ORTHO05D003454 7.6e-07 57.0 48 54.2
Potri.012G078900 Populus trichocarpa HOM05D000215 ORTHO05D003454 7.6e-07 57.0 45 60.0
Prupe.5G175800 Prunus persica HOM05D000215 ORTHO05D003454 7.6e-07 57.0 45 60.0
MBI14_g36184_MAGBIO Magnolia biondii HOM05D000215 ORTHO05D003454 9.9e-07 56.6 46 52.2
AUR62005368 Chenopodium quinoa HOM05D000215 ORTHO05D003454 1.3e-06 56.2 46 52.2
MD14G1183300 Malus domestica HOM05D000215 ORTHO05D003454 1.3e-06 56.2 46 58.7
Prupe.1G255000 Prunus persica HOM05D000215 ORTHO05D003454 1.3e-06 56.2 45 57.8
CSS0009848 Camellia sinensis var. sinensis HOM05D000215 ORTHO05D003454 1.7e-06 55.8 45 57.8
COL.COLO4_36974 Corchorus olitorius HOM05D000215 ORTHO05D003454 1.7e-06 55.8 45 53.3
PSO063G5336 Papaver somniferum HOM05D000215 ORTHO05D003454 2.9e-06 55.1 45 57.8
PGR119G1373 Punica granatum HOM05D000215 ORTHO05D003454 2.9e-06 55.1 46 52.2
Actinidia15038 Actinidia chinensis HOM05D000215 ORTHO05D003454 3.8e-06 54.7 45 57.8
Aqoxy3G03021 Aquilegia oxysepala HOM05D000215 ORTHO05D003454 3.8e-06 54.7 45 53.3
MSTRG.11437 Avicennia marina HOM05D000215 ORTHO05D003454 3.8e-06 54.7 46 60.9
Actinidia04982 Actinidia chinensis HOM05D000215 ORTHO05D003454 4.9e-06 54.3 45 60.0
Nn4g22820 Nelumbo nucifera HOM05D000215 ORTHO05D003454 4.9e-06 54.3 46 50.0
arahy.Tifrunner.gnm1.ann1.J6YH7R Arachis hypogaea HOM05D000215 ORTHO05D003454 6.4e-06 53.9 47 57.4
VMungo1215G2056 Vigna mungo HOM05D000215 ORTHO05D003454 6.4e-06 53.9 48 52.1
Lsat_1_v5_gn_5_17060 Lactuca sativa HOM05D000215 ORTHO05D003454 8.4e-06 53.5 45 57.8
PSO832G3951 Papaver somniferum HOM05D000215 ORTHO05D003454 8.4e-06 53.5 45 53.3


User provided reference genes

Program Settings