Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G68.11 Capsicum annuum HOM05D026608 ORTHO05D024810 3.7e-76 288.1 145 100.0
CAN.G58.43 Capsicum annuum HOM05D026608 ORTHO05D024810 1.1e-62 243.4 145 84.1
CAN.G93.20 Capsicum annuum HOM05D026608 ORTHO05D024810 1.7e-60 236.1 145 83.4
CAN.G264.20 Capsicum annuum HOM05D026608 ORTHO05D024810 1.6e-39 166.4 110 77.3
CAN.G1592.3 Capsicum annuum HOM05D000159 ORTHO05D000148 4.3e-32 141.7 156 51.9
Peaxi162Scf00426g00007 Petunia axillaris HOM05D000159 ORTHO05D000148 6.5e-20 101.3 140 42.9
Nitab4.5_0009912g0020 Nicotiana tabacum HOM05D000159 ORTHO05D000148 7.1e-19 97.8 162 39.5
Sopen03g033930 Solanum pennellii HOM05D000159 ORTHO05D000148 2.1e-18 96.3 159 42.1
PGSC0003DMG400024527 Solanum tuberosum HOM05D000159 ORTHO05D000148 8.7e-17 90.9 182 40.1
Dinv31030 Davidia involucrata HOM05D000159 ORTHO05D000148 1.3e-15 87.0 156 37.8
Dinv31073 Davidia involucrata HOM05D000159 ORTHO05D000148 1.3e-15 87.0 156 37.8
Dinv17446 Davidia involucrata HOM05D000159 ORTHO05D000148 2.8e-15 85.9 182 33.5
Nitab4.5_0002467g0020 Nicotiana tabacum HOM05D000159 ORTHO05D000148 3.7e-15 85.5 189 36.0
CSS0017258 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D000148 9.0e-14 80.9 169 37.3
COL.COLO4_24296 Corchorus olitorius HOM05D000159 ORTHO05D000148 2.6e-13 79.3 168 36.3
Thecc.03G106000 Theobroma cacao HOM05D000159 ORTHO05D000148 7.7e-13 77.8 169 34.9
CSS0016212 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D000148 1.0e-12 77.4 153 37.3
CSS0046901 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D000148 1.7e-12 76.6 160 34.4
Prupe.5G208300 Prunus persica HOM05D000159 ORTHO05D000148 1.7e-12 76.6 157 35.0
CsaV3_1G003380 Cucumis sativus L. HOM05D000159 ORTHO05D000148 5.0e-12 75.1 156 34.0
ClCG06G015490 Citrullus lanatus HOM05D000159 ORTHO05D000148 8.5e-12 74.3 156 34.0
Nitab4.5_0001797g0070 Nicotiana tabacum HOM05D000159 ORTHO05D000148 1.1e-11 73.9 161 36.6
Peaxi162Scf00365g00310 Petunia axillaris HOM05D000159 ORTHO05D000148 1.1e-11 73.9 147 36.7
Sed0021567 Sechium edule HOM05D000159 ORTHO05D000148 1.4e-11 73.6 146 34.2
MD06G1204000 Malus domestica HOM05D000159 ORTHO05D000148 2.5e-11 72.8 170 32.9
Duzib205G0956 Durio zibethinus HOM05D000159 ORTHO05D000148 3.2e-11 72.4 169 33.1
Duzib068G0346 Durio zibethinus HOM05D000159 ORTHO05D000148 4.2e-11 72.0 159 33.3
vmacro16482 Vaccinium macrocarpon HOM05D000159 ORTHO05D000148 4.2e-11 72.0 176 34.1
Sed0012987 Sechium edule HOM05D000159 ORTHO05D000148 7.2e-11 71.2 156 32.7
Nitab4.5_0010172g0010 Nicotiana tabacum HOM05D000159 ORTHO05D000148 1.2e-10 70.5 182 34.1
PGSC0003DMG400023260 Solanum tuberosum HOM05D000159 ORTHO05D000148 2.1e-10 69.7 137 38.7
Actinidia18975 Actinidia chinensis HOM05D000159 ORTHO05D000148 2.7e-10 69.3 144 38.9
Haze_07755 Corylus avellana HOM05D000159 ORTHO05D000148 3.6e-10 68.9 164 32.3
MD14G1215300 Malus domestica HOM05D000159 ORTHO05D000148 3.6e-10 68.9 161 32.9
ClCG04G011620 Citrullus lanatus HOM05D000159 ORTHO05D000148 4.6e-10 68.6 156 34.0
Gohir.A03G071200 Gossypium hirsutum HOM05D000159 ORTHO05D000148 4.6e-10 68.6 159 32.7
Gorai.003G102800 Gossypium raimondii HOM05D000159 ORTHO05D000148 4.6e-10 68.6 159 32.7
Hma1.2p1_0060F.1_g032790 Hydrangea macrophylla HOM05D000159 ORTHO05D000148 4.6e-10 68.6 174 33.3
Cfa019362 Carpinus fangiana HOM05D000159 ORTHO05D000148 7.9e-10 67.8 140 33.6
CiPaw.12G010000 Carya illinoinensis HOM05D000159 ORTHO05D000148 1.0e-09 67.4 139 33.8
Nitab4.5_0002041g0010 Nicotiana tabacum HOM05D000159 ORTHO05D000148 1.0e-09 67.4 151 34.4
CsaV3_1G006200 Cucumis sativus L. HOM05D000159 ORTHO05D000148 1.4e-09 67.0 139 35.3
MELO3C002048.2 Cucumis melo HOM05D000159 ORTHO05D000148 1.8e-09 66.6 139 35.3
Eucgr.B00631 Eucalyptus grandis HOM05D000159 ORTHO05D000148 1.8e-09 66.6 165 32.1
Glyma.04G159600 Glycine max HOM05D000159 ORTHO05D000148 1.8e-09 66.6 156 32.1
Sopen12g018830 Solanum pennellii HOM05D000159 ORTHO05D000148 1.8e-09 66.6 130 39.2
arahy.Tifrunner.gnm1.ann1.EG887M Arachis hypogaea HOM05D000159 ORTHO05D000148 2.3e-09 66.2 135 33.3
Gohir.D03G097700 Gossypium hirsutum HOM05D000159 ORTHO05D000148 2.3e-09 66.2 159 32.1
Lj4g0023225 Lotus japonicus HOM05D000159 ORTHO05D000148 2.3e-09 66.2 155 31.0
Nitab4.5_0001328g0100 Nicotiana tabacum HOM05D000159 ORTHO05D000148 3.0e-09 65.9 164 30.5
VMungo1215G2252 Vigna mungo HOM05D000159 ORTHO05D000148 3.0e-09 65.9 160 31.2
arahy.Tifrunner.gnm1.ann1.EUS1NI Arachis hypogaea HOM05D000159 ORTHO05D000148 3.9e-09 65.5 159 32.1
MELO3C017245.2 Cucumis melo HOM05D000159 ORTHO05D000148 3.9e-09 65.5 155 32.9
Glyma.05G019000 Glycine max HOM05D000159 ORTHO05D000148 3.9e-09 65.5 160 30.6
Sed0005575 Sechium edule HOM05D000159 ORTHO05D000148 3.9e-09 65.5 156 32.7
Nn3g17511 Nelumbo nucifera HOM05D000159 ORTHO05D000148 5.1e-09 65.1 156 32.1
Nn4g23499 Nelumbo nucifera HOM05D000159 ORTHO05D000148 5.1e-09 65.1 155 33.5
Solyc12g038520.3 Solanum lycopersicum HOM05D000159 ORTHO05D000148 5.1e-09 65.1 130 38.5
arahy.Tifrunner.gnm1.ann1.AV6HSI Arachis hypogaea HOM05D000159 ORTHO05D000148 6.7e-09 64.7 141 34.0
arahy.Tifrunner.gnm1.ann1.Y93M2M Arachis hypogaea HOM05D000159 ORTHO05D000148 6.7e-09 64.7 141 34.0
Sed0009479 Sechium edule HOM05D000159 ORTHO05D000148 8.8e-09 64.3 139 33.8
GSVIVG01012247001 Vitis vinifera HOM05D000159 ORTHO05D000148 8.8e-09 64.3 156 32.7
Ciclev10019546m.g Citrus clementina HOM05D000159 ORTHO05D000148 1.1e-08 63.9 155 30.3
Phvul.003G182900 Phaseolus vulgaris HOM05D000159 ORTHO05D000148 1.1e-08 63.9 160 31.2
Actinidia35050 Actinidia chinensis HOM05D000159 ORTHO05D000148 1.5e-08 63.5 144 35.4
Rhsim12G0149900 Rhododendron simsii HOM05D000159 ORTHO05D000148 1.5e-08 63.5 139 33.8
Manes.14G088200 Manihot esculenta HOM05D000159 ORTHO05D000148 2.0e-08 63.2 163 34.4
Sc12g0007020 Simmondsia chinensis HOM05D000159 ORTHO05D000148 2.0e-08 63.2 152 32.2
DCAR_010171 Daucus carota HOM05D000159 ORTHO05D000148 2.5e-08 62.8 156 30.8
Lalb_Chr07g0178391 Lupinus albus HOM05D000159 ORTHO05D000148 3.3e-08 62.4 133 32.3
PGR044G1979 Punica granatum HOM05D000159 ORTHO05D000148 3.3e-08 62.4 159 32.7
RcHm_v2.0_Chr7g0183501 Rosa chinensis HOM05D000159 ORTHO05D000148 5.7e-08 61.6 156 33.3
TPR.G14358 Trifolium pratense HOM05D000159 ORTHO05D000148 5.7e-08 61.6 166 30.7
QL10p020226 Quercus lobata HOM05D000159 ORTHO05D000148 7.4e-08 61.2 162 32.7
Lsat_1_v5_gn_1_14540 Lactuca sativa HOM05D000159 ORTHO05D000148 1.7e-07 60.1 148 33.1
Lalb_Chr13g0302751 Lupinus albus HOM05D000159 ORTHO05D000148 1.7e-07 60.1 133 32.3
CiPaw.11G056200 Carya illinoinensis HOM05D000159 ORTHO05D000148 2.2e-07 59.7 149 32.9
TAR629G3162 Trochodendron aralioides HOM05D000159 ORTHO05D000148 2.2e-07 59.7 138 34.1
Ca_02823_v3 Cicer arietinum L. HOM05D000159 ORTHO05D000148 2.8e-07 59.3 134 32.1
Medtr2g461920 Medicago truncatula HOM05D000159 ORTHO05D000148 2.8e-07 59.3 134 31.3
Atru.chr9.490 Acer truncatum HOM05D000159 ORTHO05D000148 3.7e-07 58.9 36 72.2
DCAR_014026 Daucus carota HOM05D000159 ORTHO05D000148 3.7e-07 58.9 165 30.3
PGR083G1895 Punica granatum HOM05D000159 ORTHO05D000148 3.7e-07 58.9 162 30.9
Atru.chr11.1593 Acer truncatum HOM05D000159 ORTHO05D000148 6.3e-07 58.2 148 34.5
Lalb_Chr12g0197331 Lupinus albus HOM05D000159 ORTHO05D000148 8.2e-07 57.8 132 31.8
Glyma.17G080700 Glycine max HOM05D000159 ORTHO05D000148 1.1e-06 57.4 155 31.0
Lj9A438G55 Lonicera japonica HOM05D000159 ORTHO05D000148 1.1e-06 57.4 51 52.9
Psat4g046440 Pisum sativum HOM05D000159 ORTHO05D000148 1.1e-06 57.4 157 31.2
CANSAT80G1002 Cannabis sativa HOM05D000159 ORTHO05D000148 1.4e-06 57.0 156 31.4
Haze_11877 Corylus avellana HOM05D000159 ORTHO05D000148 1.4e-06 57.0 137 32.8
Duzib248G0523 Durio zibethinus HOM05D000159 ORTHO05D000148 1.4e-06 57.0 134 35.8
Cpa.g.sc2783.1 Carica papaya HOM05D000159 ORTHO05D000148 2.4e-06 56.2 154 31.2
AUR62032118 Chenopodium quinoa HOM05D000159 ORTHO05D000148 2.4e-06 56.2 159 31.4
FvH4_5g13520 Fragaria vesca HOM05D000159 ORTHO05D000148 2.4e-06 56.2 51 52.9
FAN08G3039 Fragaria x ananassa HOM05D000159 ORTHO05D000148 2.4e-06 56.2 51 52.9
FAN18G2921 Fragaria x ananassa HOM05D000159 ORTHO05D000148 2.4e-06 56.2 51 52.9
Medtr4g109770 Medicago truncatula HOM05D000159 ORTHO05D000148 2.4e-06 56.2 141 34.8
Psat1g127000 Pisum sativum HOM05D000159 ORTHO05D000148 2.4e-06 56.2 51 52.9
TAR374G1071 Trochodendron aralioides HOM05D000159 ORTHO05D000148 2.4e-06 56.2 156 32.7
Glyma.06G205701 Glycine max HOM05D000159 ORTHO05D024810 4.1e-06 55.5 51 56.9
RcHm_v2.0_Chr7g0183471 Rosa chinensis HOM05D000159 ORTHO05D000148 4.1e-06 55.5 51 52.9
Thecc.02G326500 Theobroma cacao HOM05D000159 ORTHO05D000148 4.1e-06 55.5 159 32.7
Duzib251G0443 Durio zibethinus HOM05D000159 ORTHO05D000148 5.3e-06 55.1 159 33.3
Aqoxy3G03687 Aquilegia oxysepala HOM05D000159 ORTHO05D000148 6.9e-06 54.7 51 52.9
MBI16_g37054_MAGBIO Magnolia biondii HOM05D000159 ORTHO05D000148 6.9e-06 54.7 51 52.9
TPR.G1985 Trifolium pratense HOM05D000159 ORTHO05D000148 6.9e-06 54.7 50 52.0
TAR622G0263 Trochodendron aralioides HOM05D000159 ORTHO05D000148 6.9e-06 54.7 154 31.2
CiPaw.06G093600 Carya illinoinensis HOM05D000159 ORTHO05D000148 9.1e-06 54.3 145 32.4
Lj6C777T6 Lonicera japonica HOM05D000159 ORTHO05D000148 9.1e-06 54.3 148 32.4


User provided reference genes

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