Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G678.5 Capsicum annuum HOM05D000388 ORTHO05D004227 1.0e-23 112.5 54 100.0
AL2G21390 Arabidopsis lyrata HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
ATCG00360 Arabidopsis thaliana HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
A06p23270 Brassica napus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
BNapus_Darmor_BZH_scaffold_253p00140 Brassica napus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
BNapus_Darmor_BZH_scaffold_287p00050 Brassica napus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
C09p29540 Brassica napus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
BolSC29t60457H Brassica oleracea HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
BolSC29t60580H Brassica oleracea HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
BolSC45t60867H Brassica oleracea HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
BolSC45t60945H Brassica oleracea HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
BolSC47t61105H Brassica oleracea HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
BolSC49t61190H Brassica oleracea HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
BraA06t25429Z Brassica rapa HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
BraSC140t45579Z Brassica rapa HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
BraSC151t45710Z Brassica rapa HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
BraSC179t45799Z Brassica rapa HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
CARHR282020 Cardamine hirsuta HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Ciclev10004110m.g Citrus clementina HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Ciclev10010876m.g Citrus clementina HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Ciclev10027634m.g Citrus clementina HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Ciclev10027655m.g Citrus clementina HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Ciclev10030462m.g Citrus clementina HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Ciclev10030468m.g Citrus clementina HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Migut.D01425 Erythranthe guttata HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Thhalv10011045m.g Eutrema salsugineum HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Gohir.A10G100300 Gossypium hirsutum HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
HanXRQChr14g0430581 Helianthus annuus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
HanXRQChr16g0522541 Helianthus annuus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hma1.2p1_0248F.1_g102150 Hydrangea macrophylla HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Lalb_Chr23g0274721 Lupinus albus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Medtr4g051210 Medicago truncatula HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Prupe.1G271000 Prunus persica HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund08563 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund18038 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund19306 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund19311 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund24075 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund27448 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund27566 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund27604 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund27660 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund27703 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund27748 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund27759 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund27801 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund27844 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund27912 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28002 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28023 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28030 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28054 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28089 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28096 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28119 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28135 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28158 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28166 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28193 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28204 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28242 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28284 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28296 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28340 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28347 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28357 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28368 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28381 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28393 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28409 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28444 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28551 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28582 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28622 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28693 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund28727 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund29031 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund29057 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund29134 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund29411 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund29624 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund29675 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund29906 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund29948 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund30487 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund31284 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund31288 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Hund31434 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Solyc00g500058.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Solyc00g500145.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
Solyc00g500210.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 6.3e-21 103.2 54 94.4
VMungo1127G1446 Vigna mungo HOM05D000388 ORTHO05D000473 6.3e-21 103.2 54 94.4
LjContig00318g0022419 Lotus japonicus HOM05D000388 ORTHO05D004227 8.3e-21 102.8 54 92.6
EL10As20g24206 Beta vulgaris HOM05D000388 ORTHO05D004227 1.8e-20 101.7 54 92.6
C04p63050 Brassica napus HOM05D000388 ORTHO05D004227 1.8e-20 101.7 54 92.6
CAN.G1693.3 Capsicum annuum HOM05D000388 ORTHO05D004227 1.8e-20 101.7 54 92.6
Lj2P1237T81 Lonicera japonica HOM05D000388 ORTHO05D004227 1.8e-20 101.7 54 92.6
Lj2P1238T36 Lonicera japonica HOM05D000388 ORTHO05D004227 1.8e-20 101.7 54 92.6
Lj2P1239T100 Lonicera japonica HOM05D000388 ORTHO05D004227 1.8e-20 101.7 54 92.6
Lj2P1239T175 Lonicera japonica HOM05D000388 ORTHO05D004227 1.8e-20 101.7 54 92.6
MELO3C027351.2 Cucumis melo HOM05D000388 ORTHO05D004227 2.4e-20 101.3 54 92.6
QL93p0270_0008 Quercus lobata HOM05D000388 ORTHO05D004227 2.4e-20 101.3 54 92.6
BolC7t41724H Brassica oleracea HOM05D000388 ORTHO05D004227 3.1e-20 100.9 54 92.6
Nn055s41933 Nelumbo nucifera HOM05D000388 ORTHO05D004227 3.1e-20 100.9 54 92.6
Hund15468 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.1e-20 100.9 54 92.6
Gohir.A07G163609 Gossypium hirsutum HOM05D000388 ORTHO05D004227 4.1e-20 100.5 54 92.6
EL10As28g24250 Beta vulgaris HOM05D000388 ORTHO05D000473 7.0e-20 99.8 52 94.2
Gorai.011G148900 Gossypium raimondii HOM05D000388 ORTHO05D004227 7.0e-20 99.8 53 94.3
HanXRQChr02g0041451 Helianthus annuus HOM05D000388 ORTHO05D004227 7.0e-20 99.8 52 94.2
HanXRQChr02g0044971 Helianthus annuus HOM05D000388 ORTHO05D004227 7.0e-20 99.8 52 94.2
HanXRQChr04g0099361 Helianthus annuus HOM05D000388 ORTHO05D004227 7.0e-20 99.8 52 94.2
HanXRQChr07g0201031 Helianthus annuus HOM05D000388 ORTHO05D004227 7.0e-20 99.8 52 94.2
HanXRQChr08g0210281 Helianthus annuus HOM05D000388 ORTHO05D004227 7.0e-20 99.8 52 94.2
HanXRQChr10g0289191 Helianthus annuus HOM05D000388 ORTHO05D004227 7.0e-20 99.8 52 94.2
HanXRQChr11g0326711 Helianthus annuus HOM05D000388 ORTHO05D004227 7.0e-20 99.8 52 94.2
HanXRQChr13g0413551 Helianthus annuus HOM05D000388 ORTHO05D004227 7.0e-20 99.8 52 94.2
HanXRQChr14g0460931 Helianthus annuus HOM05D000388 ORTHO05D004227 7.0e-20 99.8 52 94.2
HanXRQCPg0579921 Helianthus annuus HOM05D000388 ORTHO05D000473 7.0e-20 99.8 52 94.2
Sed0002050 Sechium edule HOM05D000388 ORTHO05D004227 7.0e-20 99.8 54 90.7
Sed0007112 Sechium edule HOM05D000388 ORTHO05D004227 7.0e-20 99.8 54 90.7
Sed0015902 Sechium edule HOM05D000388 ORTHO05D004227 7.0e-20 99.8 54 90.7
Sed0019997 Sechium edule HOM05D000388 ORTHO05D004227 7.0e-20 99.8 54 90.7
Sed0002396 Sechium edule HOM05D000388 ORTHO05D004227 9.1e-20 99.4 54 90.7
Solyc05g016130.3 Solanum lycopersicum HOM05D000388 ORTHO05D004227 1.6e-19 98.6 54 88.9
Lsat_1_v5_gn_5_105761 Lactuca sativa HOM05D000388 ORTHO05D004227 2.0e-19 98.2 51 94.1
Lsat_1_v5_gn_5_58041 Lactuca sativa HOM05D000388 ORTHO05D004227 2.0e-19 98.2 51 94.1
GSVIVG01016018001 Vitis vinifera HOM05D000388 ORTHO05D004227 3.5e-19 97.4 54 88.9
HanXRQChr11g0332831 Helianthus annuus HOM05D000388 ORTHO05D004227 4.5e-19 97.1 54 90.7
LjContig00489g0010648 Lotus japonicus HOM05D000388 ORTHO05D004227 7.7e-19 96.3 54 90.7
Gohir.D06G147066 Gossypium hirsutum HOM05D000388 ORTHO05D004227 1.0e-18 95.9 54 87.0
Nitab4.5_0010321g0020 Nicotiana tabacum HOM05D000388 ORTHO05D004227 1.0e-18 95.9 52 90.4
Glyma.01G201600 Glycine max HOM05D000388 ORTHO05D004227 1.3e-18 95.5 54 87.0
Glyma.09G178600 Glycine max HOM05D000388 ORTHO05D004227 2.3e-18 94.7 54 85.2
Gorai.010G171400 Gossypium raimondii HOM05D000388 ORTHO05D004227 3.8e-18 94.0 54 85.2
BolC9t56935H Brassica oleracea HOM05D000388 ORTHO05D004227 5.0e-18 93.6 50 94.0
Peaxi162Scf00395g00715 Petunia axillaris HOM05D000388 ORTHO05D004227 5.0e-18 93.6 49 91.8
Oeu062832.1 Olea europaea HOM05D000388 ORTHO05D004227 3.3e-17 90.9 63 74.6
RcHm_v2.0_Chr5g0077061 Rosa chinensis HOM05D000388 ORTHO05D004227 9.5e-17 89.4 54 83.3
BraSC25t45876Z Brassica rapa HOM05D000388 ORTHO05D004227 4.7e-16 87.0 46 93.5
BraSC25t45839Z Brassica rapa HOM05D000388 ORTHO05D004227 8.0e-16 86.3 55 81.8
arahy.Tifrunner.gnm1.ann1.9ACV62 Arachis hypogaea HOM05D000388 ORTHO05D004227 1.2e-14 82.4 53 79.2
arahy.Tifrunner.gnm1.ann1.HC26ZW Arachis hypogaea HOM05D000388 ORTHO05D004227 1.2e-14 82.4 53 79.2
AL2G20760 Arabidopsis lyrata HOM05D000388 ORTHO05D004227 2.2e-13 78.2 41 95.1
DCAR_032485 Daucus carota HOM05D000388 ORTHO05D004227 2.2e-13 78.2 41 95.1
Gohir.A03G019600 Gossypium hirsutum HOM05D000388 ORTHO05D004227 2.2e-13 78.2 41 95.1
Gohir.A08G157400 Gossypium hirsutum HOM05D000388 ORTHO05D004227 2.2e-13 78.2 41 95.1
PSO548G0079 Papaver somniferum HOM05D000388 ORTHO05D004227 2.2e-13 78.2 41 95.1
Potri.013G141700 Populus trichocarpa HOM05D000388 ORTHO05D004227 2.2e-13 78.2 41 95.1
PGR111G0128 Punica granatum HOM05D000388 ORTHO05D004227 2.2e-13 78.2 41 95.1
Solyc09g015320.3 Solanum lycopersicum HOM05D000388 ORTHO05D004227 2.2e-13 78.2 61 68.9
Peaxi162Scf00284g01052 Petunia axillaris HOM05D000388 ORTHO05D004227 5.4e-12 73.6 50 76.0
GSVIVG01008500001 Vitis vinifera HOM05D000388 ORTHO05D004227 5.4e-12 73.6 53 64.2
RcHm_v2.0_Chr5g0077071 Rosa chinensis HOM05D000388 ORTHO05D004227 9.2e-12 72.8 47 78.7
EL10Ac1g01463 Beta vulgaris HOM05D000388 ORTHO05D004227 1.2e-11 72.4 40 90.0
Phvul.001G146500 Phaseolus vulgaris HOM05D000388 ORTHO05D004227 1.2e-11 72.4 53 69.8
Migut.D01351 Erythranthe guttata HOM05D000388 ORTHO05D004227 7.8e-11 69.7 46 76.1
Lsat_1_v5_gn_8_5941 Lactuca sativa HOM05D000388 ORTHO05D004227 3.9e-10 67.4 35 94.3
Lalb_Chr15g0080681 Lupinus albus HOM05D000388 ORTHO05D004227 3.9e-10 67.4 35 94.3
Oeu051131.1 Olea europaea HOM05D000388 ORTHO05D004227 3.9e-10 67.4 35 94.3
Potri.003G065133 Populus trichocarpa HOM05D000388 ORTHO05D004227 3.9e-10 67.4 35 94.3
SGA_v2.0_scaffold781G53593 Striga asiatica HOM05D000388 ORTHO05D009867 3.3e-09 64.3 36 88.9
HanXRQChr11g0333581 Helianthus annuus HOM05D000388 ORTHO05D004227 1.0e-07 59.3 34 88.2
Lsat_1_v5_gn_8_105481 Lactuca sativa HOM05D000388 ORTHO05D004227 1.4e-07 58.9 43 69.8
SMO086G0046 Selaginella moellendorffii HOM05D000388 ORTHO05D004227 1.8e-07 58.5 49 57.1
SEGI_24497 Sequoiadendron giganteum HOM05D000388 ORTHO05D004227 8.9e-07 56.2 33 87.9
MBI14_g12605_MAGBIO Magnolia biondii HOM05D000388 ORTHO05D004227 2.0e-06 55.1 35 74.3


User provided reference genes

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