Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G67.2 Capsicum annuum HOM05D000963 ORTHO05D004715 3.5e-65 251.5 132 100.0
CAN.G929.1 Capsicum annuum HOM05D000963 ORTHO05D004715 1.2e-57 226.5 145 79.3
Sopen06g015060 Solanum pennellii HOM05D000963 ORTHO05D004715 2.1e-57 225.7 145 80.0
PGSC0003DMG400034831 Solanum tuberosum HOM05D000963 ORTHO05D004715 2.1e-57 225.7 145 80.0
CAN.G1298.20 Capsicum annuum HOM05D000963 ORTHO05D004715 3.5e-57 224.9 145 78.6
Sed0014585 Sechium edule HOM05D000963 ORTHO05D004715 4.3e-55 218.0 145 78.6
Migut.D01391 Erythranthe guttata HOM05D000963 ORTHO05D004715 5.6e-55 217.6 145 78.6
Atru.chr1.3576 Acer truncatum HOM05D000963 ORTHO05D004715 1.3e-54 216.5 145 77.9
QL10p017079 Quercus lobata HOM05D000963 ORTHO05D004715 1.3e-54 216.5 144 77.8
QL93p0141_0026 Quercus lobata HOM05D000963 ORTHO05D004715 1.3e-54 216.5 144 77.8
Lsat_1_v5_gn_1_88180 Lactuca sativa HOM05D000963 ORTHO05D004715 2.8e-54 215.3 145 77.9
Lsat_1_v5_gn_2_97121 Lactuca sativa HOM05D000963 ORTHO05D004715 2.8e-54 215.3 145 77.9
Lsat_1_v5_gn_9_121741 Lactuca sativa HOM05D000963 ORTHO05D004715 2.8e-54 215.3 145 77.9
AL9U11970 Arabidopsis lyrata HOM05D000963 ORTHO05D004715 8.1e-54 213.8 145 77.2
C09p40280 Brassica napus HOM05D000963 ORTHO05D004715 8.1e-54 213.8 145 77.2
BolSC44t60816H Brassica oleracea HOM05D000963 ORTHO05D004715 8.1e-54 213.8 145 77.2
BolSC44t60829H Brassica oleracea HOM05D000963 ORTHO05D004715 8.1e-54 213.8 145 77.2
BolSC49t61135H Brassica oleracea HOM05D000963 ORTHO05D004715 8.1e-54 213.8 145 77.2
BraSC103t45422Z Brassica rapa HOM05D000963 ORTHO05D004715 8.1e-54 213.8 145 77.2
BraSC103t45433Z Brassica rapa HOM05D000963 ORTHO05D004715 8.1e-54 213.8 145 77.2
BraSC25t45904Z Brassica rapa HOM05D000963 ORTHO05D004715 8.1e-54 213.8 145 77.2
BraSC25t45917Z Brassica rapa HOM05D000963 ORTHO05D004715 8.1e-54 213.8 145 77.2
Lsat_1_v5_gn_8_139840 Lactuca sativa HOM05D000963 ORTHO05D004715 1.4e-53 213.0 145 77.2
QL93p0141_0000 Quercus lobata HOM05D000963 ORTHO05D004715 2.4e-53 212.2 144 76.4
BolSC29t60541H Brassica oleracea HOM05D000963 ORTHO05D004715 3.1e-53 211.8 145 76.6
COL.COLO4_02154 Corchorus olitorius HOM05D000963 ORTHO05D004715 4.0e-53 211.5 145 76.6
BraSC138t45541Z Brassica rapa HOM05D000963 ORTHO05D004715 5.3e-53 211.1 144 76.4
BolC9t56918H Brassica oleracea HOM05D000963 ORTHO05D004715 6.9e-53 210.7 145 77.2
BolSC37t60787H Brassica oleracea HOM05D000963 ORTHO05D004715 2.0e-52 209.1 146 76.7
BraSC59t46533Z Brassica rapa HOM05D000963 ORTHO05D004715 4.5e-52 208.0 145 75.2
BolSC45t60916H Brassica oleracea HOM05D000963 ORTHO05D004715 5.8e-52 207.6 141 76.6
CAN.G965.10 Capsicum annuum HOM05D000963 ORTHO05D004715 7.6e-52 207.2 145 75.2
Gohir.1Z049781 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.2e-51 205.7 145 75.2
Lsat_1_v5_gn_2_50801 Lactuca sativa HOM05D000963 ORTHO05D004715 2.2e-51 205.7 144 75.0
Lsat_1_v5_gn_5_181901 Lactuca sativa HOM05D000963 ORTHO05D004715 2.9e-51 205.3 142 75.4
Lsat_1_v5_gn_5_4701 Lactuca sativa HOM05D000963 ORTHO05D004715 2.9e-51 205.3 142 75.4
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.1e-50 203.4 141 75.2
Sed0012027 Sechium edule HOM05D000963 ORTHO05D004715 3.2e-50 201.8 144 74.3
Potri.011G074033 Populus trichocarpa HOM05D000963 ORTHO05D004715 6.0e-49 197.6 119 83.2
FvH4_c3g00050 Fragaria vesca HOM05D000963 ORTHO05D004715 1.0e-48 196.8 121 81.8
Aqoxy38s008 Aquilegia oxysepala HOM05D000963 ORTHO05D004715 5.1e-48 194.5 119 82.4
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 5.1e-48 194.5 142 69.0
Gohir.A07G151200 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.1e-48 194.5 119 81.5
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 1.1e-47 193.4 140 73.6
HPP92_028430 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.9e-47 192.6 145 71.0
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.5e-47 192.2 136 72.8
Nitab4.5_0008665g0030 Nicotiana tabacum HOM05D000963 ORTHO05D004715 9.6e-47 190.3 135 72.6
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 2.1e-46 189.1 131 76.3
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 2.1e-46 189.1 131 76.3
BraSC143t45652Z Brassica rapa HOM05D000963 ORTHO05D004715 4.8e-46 188.0 146 70.5
Gohir.A04G057626 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.4e-45 185.7 119 78.2
Gohir.D04G096676 Gossypium hirsutum HOM05D000963 ORTHO05D004715 6.9e-45 184.1 119 78.2
Gohir.D04G054150 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.6e-44 182.2 119 78.2
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 3.4e-44 181.8 116 79.3
C09p39330 Brassica napus HOM05D000963 ORTHO05D004715 2.9e-43 178.7 145 67.6
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 1.1e-42 176.8 116 77.6
Sc01g0005720 Simmondsia chinensis HOM05D000963 ORTHO05D004715 2.5e-42 175.6 119 76.5
Gorai.012G060700 Gossypium raimondii HOM05D000963 ORTHO05D004715 5.5e-42 174.5 131 71.0
Gohir.A05G286366 Gossypium hirsutum HOM05D000963 ORTHO05D004715 7.1e-42 174.1 114 78.9
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 1.6e-41 172.9 140 67.1
DCAR_014935 Daucus carota HOM05D000963 ORTHO05D004715 2.1e-41 172.6 91 91.2
Gohir.D01G169154 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.0e-40 170.2 128 71.9
BraSC58t46456Z Brassica rapa HOM05D000963 ORTHO05D004715 1.8e-40 169.5 89 91.0
HPP92_028419 Vanilla planifolia HOM05D000963 ORTHO05D004715 3.9e-40 168.3 112 75.9
HPP92_028432 Vanilla planifolia HOM05D000963 ORTHO05D004715 3.9e-40 168.3 112 75.9
FAN13G1706 Fragaria x ananassa HOM05D000963 ORTHO05D004715 1.1e-39 166.8 107 78.5
arahy.Tifrunner.gnm1.ann1.0S9V2W Arachis hypogaea HOM05D000963 ORTHO05D004715 1.9e-39 166.0 91 89.0
arahy.Tifrunner.gnm1.ann1.56M0GV Arachis hypogaea HOM05D000963 ORTHO05D004715 1.9e-39 166.0 91 89.0
arahy.Tifrunner.gnm1.ann1.E29LBX Arachis hypogaea HOM05D000963 ORTHO05D004715 1.9e-39 166.0 91 89.0
arahy.Tifrunner.gnm1.ann1.NRNC1F Arachis hypogaea HOM05D000963 ORTHO05D004715 1.9e-39 166.0 91 89.0
arahy.Tifrunner.gnm1.ann1.PH4GL6 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.9e-39 166.0 91 89.0
arahy.Tifrunner.gnm1.ann1.RS9AFF Arachis hypogaea HOM05D000963 ORTHO05D004715 1.9e-39 166.0 91 89.0
arahy.Tifrunner.gnm1.ann1.TDDH8C Arachis hypogaea HOM05D000963 ORTHO05D004715 1.9e-39 166.0 91 89.0
arahy.Tifrunner.gnm1.ann1.UGP0DD Arachis hypogaea HOM05D000963 ORTHO05D004715 1.9e-39 166.0 91 89.0
arahy.Tifrunner.gnm1.ann1.WD30LQ Arachis hypogaea HOM05D000963 ORTHO05D004715 1.9e-39 166.0 91 89.0
arahy.Tifrunner.gnm1.ann1.ZA1EMG Arachis hypogaea HOM05D000963 ORTHO05D004715 1.9e-39 166.0 91 89.0
HPP92_028383 Vanilla planifolia HOM05D000963 ORTHO05D004715 4.3e-39 164.9 112 75.0
HPP92_028406 Vanilla planifolia HOM05D000963 ORTHO05D004715 4.3e-39 164.9 112 75.0
HPP92_028415 Vanilla planifolia HOM05D000963 ORTHO05D004715 4.3e-39 164.9 112 75.0
arahy.Tifrunner.gnm1.ann1.54C0KZ Arachis hypogaea HOM05D000963 ORTHO05D004715 5.7e-39 164.5 91 87.9
arahy.Tifrunner.gnm1.ann1.WSE485 Arachis hypogaea HOM05D000963 ORTHO05D004715 9.7e-39 163.7 91 87.9
Gohir.A01G139826 Gossypium hirsutum HOM05D000963 ORTHO05D004715 6.3e-38 161.0 145 62.1
SalBow1G2814 Salvia bowleyana HOM05D000963 ORTHO05D004715 1.4e-37 159.8 121 72.7
SalBow1G5969 Salvia bowleyana HOM05D000963 ORTHO05D004715 1.4e-37 159.8 121 72.7
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 3.1e-37 158.7 81 92.6
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 3.1e-37 158.7 140 65.0
Oeu050315.1 Olea europaea HOM05D000963 ORTHO05D004715 1.5e-36 156.4 96 83.3
Oeu015131.2 Olea europaea HOM05D000963 ORTHO05D004715 3.4e-36 155.2 108 74.1
Oeu012821.1 Olea europaea HOM05D000963 ORTHO05D004715 7.6e-36 154.1 145 62.8
arahy.Tifrunner.gnm1.ann1.0QCF99 Arachis hypogaea HOM05D000963 ORTHO05D004715 2.2e-35 152.5 82 89.0
arahy.Tifrunner.gnm1.ann1.6K111H Arachis hypogaea HOM05D000963 ORTHO05D004715 2.2e-35 152.5 82 89.0
arahy.Tifrunner.gnm1.ann1.B9EW81 Arachis hypogaea HOM05D000963 ORTHO05D004715 2.2e-35 152.5 82 89.0
arahy.Tifrunner.gnm1.ann1.NMB5YK Arachis hypogaea HOM05D000963 ORTHO05D004715 2.2e-35 152.5 82 89.0
arahy.Tifrunner.gnm1.ann1.QIDR5S Arachis hypogaea HOM05D000963 ORTHO05D004715 2.2e-35 152.5 82 89.0
Actinidia23508 Actinidia chinensis HOM05D000963 ORTHO05D004715 2.9e-35 152.1 80 91.2
BraSC59t46506Z Brassica rapa HOM05D000963 ORTHO05D004715 2.9e-35 152.1 115 72.2
arahy.Tifrunner.gnm1.ann1.D5AR02 Arachis hypogaea HOM05D000963 ORTHO05D004715 5.0e-35 151.4 131 63.4
CsaV3_2G008200 Cucumis sativus L. HOM05D000963 ORTHO05D004715 1.1e-34 150.2 78 89.7
Lsat_1_v5_gn_1_109481 Lactuca sativa HOM05D000963 ORTHO05D004715 5.5e-34 147.9 90 78.9
arahy.Tifrunner.gnm1.ann1.R4PVYI Arachis hypogaea HOM05D000963 ORTHO05D004715 7.9e-33 144.1 81 85.2
arahy.Tifrunner.gnm1.ann1.LM30Y3 Arachis hypogaea HOM05D000963 ORTHO05D004715 6.7e-32 141.0 82 81.7
Dinv05169 Davidia involucrata HOM05D000963 ORTHO05D004715 1.5e-31 139.8 81 84.0
FAN18G1953 Fragaria x ananassa HOM05D000315 ORTHO05D004100 5.7e-31 137.9 85 80.0
unitig_91.g26522 Utricularia gibba HOM05D000963 ORTHO05D004715 7.4e-31 137.5 77 81.8
unitig_91.g26525 Utricularia gibba HOM05D000963 ORTHO05D004715 7.4e-31 137.5 77 81.8
CSS0016818 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D004715 4.8e-30 134.8 145 55.2
Gohir.D01G023469 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.1e-29 133.7 77 84.4
Gorai.002G027900 Gossypium raimondii HOM05D000963 ORTHO05D004715 1.4e-29 133.3 77 83.1
Gohir.A04G039030 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.3e-27 126.7 72 84.7
Phvul.003G259600 Phaseolus vulgaris HOM05D000963 ORTHO05D004715 2.2e-27 125.9 89 73.0
Gohir.D11G164850 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.4e-26 123.2 103 68.0
Nitab4.5_0012234g0080 Nicotiana tabacum HOM05D000963 ORTHO05D004715 1.9e-26 122.9 120 60.8
Rhsim12G0135200 Rhododendron simsii HOM05D000963 ORTHO05D004715 3.2e-26 122.1 57 94.7
Lsat_1_v5_gn_2_90421 Lactuca sativa HOM05D000963 ORTHO05D004715 4.2e-26 121.7 105 68.6
SabraPtG0005400 Salix brachista HOM05D000963 ORTHO05D004715 1.0e-24 117.1 89 70.8
Glyma.06G274000 Glycine max HOM05D000963 ORTHO05D004715 5.1e-24 114.8 92 65.2
Nitab4.5_0007400g0120 Nicotiana tabacum HOM05D000963 ORTHO05D004715 5.1e-24 114.8 99 64.6
Nitab4.5_0004137g0020 Nicotiana tabacum HOM05D000963 ORTHO05D004715 1.5e-23 113.2 103 62.1
BcaNung01516 Brassica carinata HOM05D000963 ORTHO05D004715 3.3e-23 112.1 119 52.1
VMungo0331G0858 Vigna mungo HOM05D000963 ORTHO05D004715 2.8e-22 109.0 66 74.2
Gohir.A01G119775 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.6e-20 102.4 93 64.5
Mapoly0147s0015 Marchantia polymorpha HOM05D000963 ORTHO05D004715 1.3e-19 100.1 122 49.2
Sc25g0002020 Simmondsia chinensis HOM05D000963 ORTHO05D004715 3.8e-19 98.6 45 93.3
Psat3g162200 Pisum sativum HOM05D000963 ORTHO05D004715 5.0e-19 98.2 48 89.6
Hma1.2p1_0051F.1_g029250 Hydrangea macrophylla HOM05D000963 ORTHO05D004715 1.4e-18 96.7 43 95.3
COL.COLO4_03191 Corchorus olitorius HOM05D000963 ORTHO05D004715 5.5e-18 94.7 109 56.0
Sabra08G0089800 Salix brachista HOM05D000963 ORTHO05D004715 5.5e-18 94.7 105 55.2
Gohir.A01G139250 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.2e-17 93.6 46 93.5
Potri.002G263451 Populus trichocarpa HOM05D000963 ORTHO05D004715 4.7e-17 91.7 93 60.2
TPR.G27622 Trifolium pratense HOM05D000963 ORTHO05D004715 1.8e-16 89.7 46 87.0
Medtr1g105230 Medicago truncatula HOM05D000963 ORTHO05D004715 2.3e-16 89.4 42 92.9
DCAR_017253 Daucus carota HOM05D000963 ORTHO05D004715 3.0e-16 89.0 59 78.0
BolSC46t60965H Brassica oleracea HOM05D000963 ORTHO05D004715 3.3e-15 85.5 79 64.6
BraSC59t46544Z Brassica rapa HOM05D000963 ORTHO05D004715 3.3e-15 85.5 86 60.5
BolSC29t60514H Brassica oleracea HOM05D000963 ORTHO05D004715 4.4e-15 85.1 79 64.6
Manes.18G094701 Manihot esculenta HOM05D000963 ORTHO05D004715 7.4e-15 84.3 67 67.2
Cpa.g.sc302.1 Carica papaya HOM05D000963 ORTHO05D004715 1.3e-14 83.6 80 63.8
BolSC29t60553H Brassica oleracea HOM05D000963 ORTHO05D004715 2.2e-14 82.8 77 64.9
Psat5g119040 Pisum sativum HOM05D000963 ORTHO05D004715 2.8e-14 82.4 86 55.8
CAN.G1594.2 Capsicum annuum HOM05D016096 ORTHO05D016167 4.8e-14 81.6 42 90.5
BolSC35t60711H Brassica oleracea HOM05D000963 ORTHO05D004715 6.3e-14 81.3 86 58.1
BolC2t10606H Brassica oleracea HOM05D000963 ORTHO05D004715 1.1e-13 80.5 86 57.0
BolC2t10589H Brassica oleracea HOM05D000963 ORTHO05D004715 1.4e-13 80.1 79 62.0
BolSC49t61150H Brassica oleracea HOM05D000963 ORTHO05D004715 1.4e-13 80.1 79 62.0
Oeu033793.1 Olea europaea HOM05D001982 ORTHO05D003938 1.8e-13 79.7 67 68.7
BolSC45t60901H Brassica oleracea HOM05D000963 ORTHO05D004715 2.4e-13 79.3 86 57.0
Gorai.002G200300 Gossypium raimondii HOM05D000963 ORTHO05D004715 2.6e-12 75.9 35 91.4
EL10Ac7g17374 Beta vulgaris HOM05D000963 ORTHO05D004715 1.5e-10 70.1 76 56.6
FvH4_7g01961 Fragaria vesca HOM05D000963 ORTHO05D004715 1.5e-10 70.1 121 41.3
FAN01G1433 Fragaria x ananassa HOM05D000963 ORTHO05D004715 1.2e-09 67.0 51 72.5
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 3.6e-09 65.5 41 80.5
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 3.6e-09 65.5 41 80.5
EL10Ac7g17381 Beta vulgaris HOM05D000963 ORTHO05D004715 8.0e-09 64.3 76 52.6
Sc21g0003630 Simmondsia chinensis HOM05D000556 ORTHO05D000404 1.5e-07 60.1 46 67.4
BolSC43t60811H Brassica oleracea HOM05D000963 ORTHO05D004715 6.3e-06 54.7 42 69.0
BraSC179t45779Z Brassica rapa HOM05D000963 ORTHO05D004715 6.3e-06 54.7 42 69.0
Migut.N00577 Erythranthe guttata HOM05D000963 ORTHO05D004715 6.3e-06 54.7 40 80.0
Thecc.09G087300 Theobroma cacao HOM05D000963 ORTHO05D004715 6.3e-06 54.7 42 69.0


User provided reference genes

Program Settings