Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G665.23 Capsicum annuum HOM05D002907 ORTHO05D005554 9.6e-101 370.2 186 100.0
CAN.G181.45 Capsicum annuum HOM05D002907 ORTHO05D005554 8.2e-60 234.2 168 75.6
CAN.G1597.6 Capsicum annuum HOM05D002907 ORTHO05D005554 1.8e-54 216.5 129 86.0
CAN.G542.9 Capsicum annuum HOM05D002907 ORTHO05D005554 4.4e-45 185.3 113 84.1
CAN.G1160.4 Capsicum annuum HOM05D002907 ORTHO05D005554 5.7e-45 184.9 110 81.8
CAN.G509.9 Capsicum annuum HOM05D002907 ORTHO05D005554 1.6e-42 176.8 108 80.6
CAN.G419.22 Capsicum annuum HOM05D002907 ORTHO05D005554 5.0e-41 171.8 102 84.3
CAN.G1243.6 Capsicum annuum HOM05D002907 ORTHO05D005554 1.9e-40 169.9 98 83.7
Sopen06g010830 Solanum pennellii HOM05D002907 ORTHO05D005554 4.1e-35 152.1 114 67.5
Nitab4.5_0002548g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.0e-33 147.5 157 54.8
Sopen02g003400 Solanum pennellii HOM05D002907 ORTHO05D005554 2.2e-33 146.4 112 67.9
Solyc02g055537.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.8e-33 145.6 116 63.8
CAN.G98.12 Capsicum annuum HOM05D002907 ORTHO05D005554 5.0e-33 145.2 78 87.2
Nitab4.5_0000162g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.7e-31 139.4 100 72.0
Solyc02g044000.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.6e-31 139.0 106 65.1
Nitab4.5_0002746g0010 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.8e-30 136.7 106 68.9
Nitab4.5_0002986g0060 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.3e-30 136.3 123 60.2
Nitab4.5_0000011g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.5e-29 133.7 123 57.7
Nitab4.5_0000248g0100 Nicotiana tabacum HOM05D002907 ORTHO05D005554 9.8e-29 131.0 92 69.6
Solyc06g011610.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.3e-28 130.6 147 52.4
PGSC0003DMG400044579 Solanum tuberosum HOM05D002907 ORTHO05D005554 2.2e-28 129.8 116 58.6
Nitab4.5_0026714g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 4.8e-28 128.6 99 66.7
Peaxi162Scf00386g00927 Petunia axillaris HOM05D002907 ORTHO05D005554 2.4e-27 126.3 91 69.2
Sopen09g023780 Solanum pennellii HOM05D002907 ORTHO05D005554 2.4e-27 126.3 151 45.7
Sopen01g012720 Solanum pennellii HOM05D002907 ORTHO05D005554 4.1e-27 125.6 151 46.4
Sopen11g022000 Solanum pennellii HOM05D002907 ORTHO05D005554 9.1e-27 124.4 151 45.7
CAN.G1418.2 Capsicum annuum HOM05D002907 ORTHO05D005554 2.7e-26 122.9 75 81.3
Peaxi162Scf00005g02517 Petunia axillaris HOM05D002907 ORTHO05D005554 2.7e-26 122.9 122 57.4
Peaxi162Scf00431g00511 Petunia axillaris HOM05D002907 ORTHO05D005554 5.9e-26 121.7 91 67.0
CANSAT35G0321 Cannabis sativa HOM05D002907 ORTHO05D005554 7.7e-26 121.3 103 59.2
Peaxi162Scf00203g01424 Petunia axillaris HOM05D002907 ORTHO05D005554 7.7e-26 121.3 128 54.7
CANSAT01G2740 Cannabis sativa HOM05D002907 ORTHO05D005554 1.7e-25 120.2 98 60.2
CANSAT01G3093 Cannabis sativa HOM05D002907 ORTHO05D005554 1.7e-25 120.2 99 60.6
Peaxi162Scf00073g02336 Petunia axillaris HOM05D002907 ORTHO05D005554 2.9e-25 119.4 166 48.2
Peaxi162Scf00661g00421 Petunia axillaris HOM05D002907 ORTHO05D005554 2.9e-25 119.4 166 48.2
Peaxi162Scf01370g00020 Petunia axillaris HOM05D002907 ORTHO05D005554 2.9e-25 119.4 166 48.2
Nitab4.5_0009770g0040 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.1e-24 117.5 80 72.5
CANSAT56G4249 Cannabis sativa HOM05D002907 ORTHO05D005554 1.9e-24 116.7 98 59.2
Solyc10g074430.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.3e-24 115.9 151 43.0
Peaxi162Scf00816g00411 Petunia axillaris HOM05D002907 ORTHO05D005554 3.4e-21 105.9 125 52.8
Nitab4.5_0000037g0130 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.4e-19 99.8 109 52.3
Nitab4.5_0000745g0100 Nicotiana tabacum HOM05D002907 ORTHO05D005554 4.1e-19 99.0 81 61.7
Nitab4.5_0000488g0170 Nicotiana tabacum HOM05D002907 ORTHO05D005554 5.4e-19 98.6 85 60.0
Nitab4.5_0000037g0150 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.2e-18 97.4 75 66.7
DCAR_027158 Daucus carota HOM05D002907 ORTHO05D005554 1.5e-16 90.5 99 47.5
Solyc12g038200.3 Solanum lycopersicum HOM05D002700 ORTHO05D003228 4.3e-16 89.0 61 70.5
Nitab4.5_0008853g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.2e-15 87.4 76 60.5
Nitab4.5_0000164g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.1e-15 86.7 89 53.9
DCAR_010335 Daucus carota HOM05D002907 ORTHO05D005554 3.1e-14 82.8 91 46.2
DCAR_024022 Daucus carota HOM05D002907 ORTHO05D005554 8.9e-14 81.3 89 46.1
Peaxi162Scf00168g01413 Petunia axillaris HOM05D002907 ORTHO05D005554 7.5e-13 78.2 163 38.7
Nitab4.5_0002746g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.9e-12 76.3 69 58.0
QL05p044516 Quercus lobata HOM05D002907 ORTHO05D000065 1.1e-11 74.3 123 35.8
DCAR_030301 Daucus carota HOM05D002907 ORTHO05D005554 1.4e-11 73.9 119 40.3
QL07p007200 Quercus lobata HOM05D000096 ORTHO05D000045 1.9e-11 73.6 107 40.2
QL93p0100_0313 Quercus lobata HOM05D000038 ORTHO05D000612 3.2e-11 72.8 106 37.7
Lj1A275T36 Lonicera japonica HOM05D002907 ORTHO05D000065 5.4e-11 72.0 85 41.2
QL01p044581 Quercus lobata HOM05D002907 ORTHO05D005554 9.2e-11 71.2 107 39.3
QL01p044591 Quercus lobata HOM05D002907 ORTHO05D005554 9.2e-11 71.2 107 39.3
QL04p076347 Quercus lobata HOM05D002907 ORTHO05D000065 1.6e-10 70.5 123 35.0
DCAR_004276 Daucus carota HOM05D002907 ORTHO05D000065 2.0e-10 70.1 91 36.3
QL93p0160_0004 Quercus lobata HOM05D002907 ORTHO05D000065 2.0e-10 70.1 106 36.8
QL06p039579 Quercus lobata HOM05D002907 ORTHO05D000065 4.6e-10 68.9 90 38.9
QL93p0160_0016 Quercus lobata HOM05D002907 ORTHO05D000065 6.0e-10 68.6 106 35.8
DCAR_005332 Daucus carota HOM05D002907 ORTHO05D000065 1.0e-09 67.8 83 37.3
DCAR_000518 Daucus carota HOM05D002907 ORTHO05D000065 2.3e-09 66.6 91 35.2
DCAR_011057 Daucus carota HOM05D002907 ORTHO05D000065 2.3e-09 66.6 82 36.6
Lj2A19T41 Lonicera japonica HOM05D002907 ORTHO05D000065 2.3e-09 66.6 80 41.2
Lj7A628T41 Lonicera japonica HOM05D002907 ORTHO05D000065 3.9e-09 65.9 156 29.5
DCAR_031592 Daucus carota HOM05D002907 ORTHO05D000065 5.0e-09 65.5 82 35.4
Medtr4g070090 Medicago truncatula HOM05D002907 ORTHO05D000065 6.6e-09 65.1 99 36.4
Medtr5g027390 Medicago truncatula HOM05D002907 ORTHO05D000065 6.6e-09 65.1 99 36.4
DCAR_031299 Daucus carota HOM05D000001 ORTHO05D000003 1.1e-08 64.3 82 35.4
DCAR_032054 Daucus carota HOM05D002907 ORTHO05D000065 1.5e-08 63.9 81 32.1
Peaxi162Scf00871g00034 Petunia axillaris HOM05D002907 ORTHO05D005554 2.5e-08 63.2 151 35.1
DCAR_001059 Daucus carota HOM05D002907 ORTHO05D000065 3.3e-08 62.8 88 31.8
Aa31LG7G11790 Aethionema arabicum HOM05D000353 ORTHO05D000174 5.6e-08 62.0 114 33.3
DCAR_022271 Daucus carota HOM05D012849 ORTHO05D014614 5.6e-08 62.0 80 31.2
DCAR_031322 Daucus carota HOM05D002907 ORTHO05D000065 5.6e-08 62.0 109 31.2
CARHR152820 Cardamine hirsuta HOM05D000305 ORTHO05D000065 7.3e-08 61.6 82 42.7
DCAR_022753 Daucus carota HOM05D002907 ORTHO05D000065 7.3e-08 61.6 91 34.1
DCAR_025606 Daucus carota HOM05D012849 ORTHO05D000065 7.3e-08 61.6 82 36.6
CAN.G663.2 Capsicum annuum HOM05D002907 ORTHO05D005554 9.5e-08 61.2 46 67.4
Hma1.2p1_0045F.1_g026410 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 9.5e-08 61.2 125 32.0
DCAR_017346 Daucus carota HOM05D012849 ORTHO05D014614 1.2e-07 60.8 80 35.0
DCAR_010742 Daucus carota HOM05D002907 ORTHO05D000065 2.8e-07 59.7 85 36.5
DCAR_007681 Daucus carota HOM05D002907 ORTHO05D000065 3.6e-07 59.3 85 35.3
SGA_v2.0_scaffold106G30698 Striga asiatica HOM05D000353 ORTHO05D000174 4.7e-07 58.9 82 35.4
Medtr8g039210 Medicago truncatula HOM05D000096 ORTHO05D000045 6.2e-07 58.5 100 32.0
DCAR_031560 Daucus carota HOM05D002907 ORTHO05D014614 1.4e-06 57.4 107 33.6
Peaxi162Scf00635g00615 Petunia axillaris HOM05D002907 ORTHO05D005554 1.4e-06 57.4 45 66.7
SGA_v2.0_scaffold49G18365 Striga asiatica HOM05D024561 ORTHO05D002376 1.4e-06 57.4 82 34.1
DCAR_025622 Daucus carota HOM05D012849 ORTHO05D000065 1.8e-06 57.0 86 36.0
TPR.G6063 Trifolium pratense HOM05D000096 ORTHO05D000065 2.3e-06 56.6 100 31.0
DCAR_004801 Daucus carota HOM05D002907 ORTHO05D000065 3.1e-06 56.2 84 32.1
BcaB08g35018 Brassica carinata HOM05D000305 ORTHO05D000065 6.8e-06 55.1 122 30.3
Hma1.2p1_0006F.1_g004680 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 6.8e-06 55.1 141 30.5
BcaC09g51435 Brassica carinata HOM05D000353 ORTHO05D000174 8.9e-06 54.7 84 35.7
A06p43450 Brassica napus HOM05D000353 ORTHO05D000174 8.9e-06 54.7 95 32.6
BolC1t01288H Brassica oleracea HOM05D000353 ORTHO05D000174 8.9e-06 54.7 84 35.7
BolC2t09611H Brassica oleracea HOM05D000353 ORTHO05D000174 8.9e-06 54.7 87 36.8
BolC8t47083H Brassica oleracea HOM05D000353 ORTHO05D000174 8.9e-06 54.7 87 36.8
DCAR_020214 Daucus carota HOM05D002907 ORTHO05D000065 8.9e-06 54.7 78 35.9
HanXRQChr09g0257401 Helianthus annuus HOM05D003964 ORTHO05D000174 8.9e-06 54.7 104 29.8


User provided reference genes

Program Settings