Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G660.7 Capsicum annuum HOM05D005490 ORTHO05D006606 1.6e-264 915.6 502 100.0
Solyc02g090850.3 Solanum lycopersicum HOM05D005490 ORTHO05D006606 2.1e-219 765.8 449 92.7
PGSC0003DMG400004042 Solanum tuberosum HOM05D005490 ORTHO05D006606 1.4e-218 763.1 449 92.4
Nitab4.5_0002016g0110 Nicotiana tabacum HOM05D005490 ORTHO05D006606 1.3e-208 729.9 452 90.3
Dinv29986 Davidia involucrata HOM05D005490 ORTHO05D006606 3.3e-180 635.6 455 76.9
Cc07_g05990 Coffea canephora HOM05D005490 ORTHO05D006606 2.4e-178 629.4 451 78.5
CiPaw.01G018200 Carya illinoinensis HOM05D005490 ORTHO05D006606 9.0e-178 627.5 452 76.3
Lj7A69T47 Lonicera japonica HOM05D005490 ORTHO05D006606 2.9e-176 622.5 488 73.4
GSVIVG01022130001 Vitis vinifera HOM05D005490 ORTHO05D006606 3.2e-175 619.0 448 75.7
DCAR_025733 Daucus carota HOM05D005490 ORTHO05D006606 3.5e-174 615.5 477 72.5
TWI09G1398 Tripterygium wilfordii HOM05D005490 ORTHO05D006606 6.0e-174 614.8 453 77.0
Oeu031525.2 Olea europaea HOM05D005490 ORTHO05D006606 1.5e-172 610.1 452 75.9
Manes.12G106800 Manihot esculenta HOM05D005490 ORTHO05D006606 4.3e-172 608.6 454 76.7
Gohir.D11G199100 Gossypium hirsutum HOM05D005490 ORTHO05D006606 7.4e-172 607.8 452 75.7
CANSAT01G1717 Cannabis sativa HOM05D005490 ORTHO05D006606 1.3e-171 607.1 451 74.3
Actinidia03792 Actinidia chinensis HOM05D005490 ORTHO05D006606 6.2e-171 604.7 452 74.6
Oeu062437.1 Olea europaea HOM05D005490 ORTHO05D006606 1.8e-170 603.2 452 75.7
QL06p041379 Quercus lobata HOM05D005490 ORTHO05D006606 1.8e-170 603.2 486 70.6
Prupe.7G133300 Prunus persica HOM05D005490 ORTHO05D006606 2.4e-170 602.8 452 73.9
Cfa004023 Carpinus fangiana HOM05D005490 ORTHO05D006606 9.0e-170 600.9 452 74.8
Potri.007G044100 Populus trichocarpa HOM05D005490 ORTHO05D006606 9.0e-170 600.9 454 74.4
Gorai.007G213300 Gossypium raimondii HOM05D005490 ORTHO05D006606 1.5e-169 600.1 448 75.4
Ciclev10025320m.g Citrus clementina HOM05D005490 ORTHO05D006606 4.5e-169 598.6 452 74.3
Glyma.01G186000 Glycine max HOM05D005490 ORTHO05D006606 7.6e-169 597.8 451 75.4
Lj2g0003149 Lotus japonicus HOM05D005490 ORTHO05D006606 4.9e-168 595.1 454 74.4
VMungo1215G3252 Vigna mungo HOM05D005490 ORTHO05D006606 1.9e-167 593.2 452 73.9
Phvul.002G018900 Phaseolus vulgaris HOM05D005490 ORTHO05D006606 2.4e-167 592.8 451 74.3
Hma1.2p1_0461F.1_g157810 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 3.2e-167 592.4 450 73.3
Duzib187G0068 Durio zibethinus HOM05D005490 ORTHO05D006606 7.1e-167 591.3 461 73.1
Gohir.A11G192400 Gossypium hirsutum HOM05D005490 ORTHO05D006606 2.1e-166 589.7 448 74.1
Lalb_Chr05g0213291 Lupinus albus HOM05D005490 ORTHO05D006606 2.7e-166 589.3 456 73.0
Nn5g30300 Nelumbo nucifera HOM05D005490 ORTHO05D006606 4.6e-166 588.6 449 73.5
Thecc.01G056300 Theobroma cacao HOM05D005490 ORTHO05D006606 1.0e-165 587.4 450 73.3
arahy.Tifrunner.gnm1.ann1.JF37M9 Arachis hypogaea HOM05D005490 ORTHO05D006606 2.3e-165 586.3 448 75.0
Glyma.11G056000 Glycine max HOM05D005490 ORTHO05D006606 8.7e-165 584.3 450 74.0
RcHm_v2.0_Chr2g0105671 Rosa chinensis HOM05D005490 ORTHO05D006606 8.7e-165 584.3 453 73.5
Medtr5g017430 Medicago truncatula HOM05D005490 ORTHO05D006606 1.1e-164 583.9 453 74.4
Sabra07G0038800 Salix brachista HOM05D005490 ORTHO05D006606 1.9e-164 583.2 502 66.9
CsaV3_2G016660 Cucumis sativus L. HOM05D005490 ORTHO05D006606 1.3e-163 580.5 452 73.5
TPR.G30705 Trifolium pratense HOM05D005490 ORTHO05D006606 6.2e-163 578.2 449 74.2
Sc03g0001580 Simmondsia chinensis HOM05D005490 ORTHO05D006606 8.2e-163 577.8 451 75.2
PSO170G3823 Papaver somniferum HOM05D005490 ORTHO05D006606 1.4e-162 577.0 450 73.8
PSO210G6251 Papaver somniferum HOM05D005490 ORTHO05D006606 2.4e-162 576.2 450 74.2
SGA_v2.0_scaffold15G07303 Striga asiatica HOM05D005490 ORTHO05D006606 1.2e-161 573.9 449 74.2
Lsat_1_v5_gn_2_84101 Lactuca sativa HOM05D005490 ORTHO05D006606 1.5e-161 573.5 477 70.4
Peaxi162Scf00450g00420 Petunia axillaris HOM05D005490 ORTHO05D006606 1.5e-161 573.5 454 72.0
Ca_24770_v3 Cicer arietinum L. HOM05D005490 ORTHO05D006606 4.5e-161 572.0 447 72.7
COL.COLO4_11415 Corchorus olitorius HOM05D005490 ORTHO05D006606 5.8e-161 571.6 446 73.1
arahy.Tifrunner.gnm1.ann1.5GG3L5 Arachis hypogaea HOM05D005490 ORTHO05D006606 1.0e-160 570.9 477 70.4
FAN19G0012 Fragaria x ananassa HOM05D005490 ORTHO05D006606 2.9e-160 569.3 467 72.2
ECA238G0711 Erigeron canadensis HOM05D005490 ORTHO05D006606 1.4e-159 567.0 449 72.4
Gohir.A02G157300 Gossypium hirsutum HOM05D005490 ORTHO05D006606 5.5e-159 565.1 449 73.1
Migut.H00433 Erythranthe guttata HOM05D005490 ORTHO05D006606 1.6e-158 563.5 454 72.2
Psat2g166360 Pisum sativum HOM05D005490 ORTHO05D006606 1.6e-158 563.5 451 71.6
FAN28G1226 Fragaria x ananassa HOM05D005490 ORTHO05D006606 2.1e-158 563.1 467 71.1
Sed0007368 Sechium edule HOM05D005490 ORTHO05D006606 2.7e-158 562.8 456 72.4
Gorai.003G025100 Gossypium raimondii HOM05D005490 ORTHO05D006606 2.3e-157 559.7 450 73.6
CSS0049924 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 1.9e-156 556.6 454 72.7
HanXRQChr14g0442791 Helianthus annuus HOM05D005490 ORTHO05D006606 4.3e-156 555.4 451 68.7
AT4G36980 Arabidopsis thaliana HOM05D005490 ORTHO05D006606 4.8e-155 552.0 455 71.0
THA.LOC104804216 Tarenaya hassleriana HOM05D005490 ORTHO05D006606 1.1e-154 550.8 455 69.9
Hund16323 Selenicereus undatus HOM05D005490 ORTHO05D006606 2.4e-154 549.7 450 70.2
Sp7g34780 Schrenkiella parvula HOM05D005490 ORTHO05D006606 2.0e-153 546.6 456 70.8
Carub.0007s0317 Capsella rubella HOM05D005490 ORTHO05D006606 4.5e-153 545.4 453 71.3
Thhalv10025018m.g Eutrema salsugineum HOM05D005490 ORTHO05D006606 2.2e-152 543.1 453 71.7
Gohir.D03G023600 Gossypium hirsutum HOM05D005490 ORTHO05D006606 3.8e-152 542.3 449 72.4
C01p01990 Brassica napus HOM05D005490 ORTHO05D006606 1.9e-151 540.0 455 69.7
EL10Ac6g15745 Beta vulgaris HOM05D005490 ORTHO05D006606 3.2e-151 539.3 468 68.4
Aa31LG6G13990 Aethionema arabicum HOM05D005490 ORTHO05D006606 7.2e-151 538.1 468 67.1
A01p01850 Brassica napus HOM05D005490 ORTHO05D006606 2.7e-150 536.2 455 68.6
BraA01t00174Z Brassica rapa HOM05D005490 ORTHO05D006606 2.7e-150 536.2 455 68.6
AL7G13750 Arabidopsis lyrata HOM05D005490 ORTHO05D006606 4.6e-150 535.4 455 70.5
ClCG02G012530 Citrullus lanatus HOM05D005490 ORTHO05D006606 3.9e-149 532.3 449 68.8
BcaNung02520 Brassica carinata HOM05D005490 ORTHO05D006606 6.7e-149 531.6 454 68.3
BolC1t00193H Brassica oleracea HOM05D005490 ORTHO05D006606 3.3e-148 529.3 466 67.8
CDE08G0045 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 2.8e-147 526.2 462 66.5
MD02G1172000 Malus domestica HOM05D005490 ORTHO05D006606 2.6e-145 519.6 375 76.3
Potri.005G138200 Populus trichocarpa HOM05D005490 ORTHO05D006606 1.0e-144 517.7 375 75.7
Aqoxy5G01229 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 1.3e-144 517.3 374 75.4
CDE06G1923 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 1.3e-144 517.3 452 65.9
Os03g0395900 Oryza sativa ssp. japonica HOM05D005490 ORTHO05D006606 5.5e-143 511.9 449 65.3
CARHR245520 Cardamine hirsuta HOM05D005490 ORTHO05D006606 2.3e-141 506.5 455 67.7
Nitab4.5_0002440g0010 Nicotiana tabacum HOM05D005490 ORTHO05D006606 9.7e-140 501.1 454 64.5
TAR381G1106 Trochodendron aralioides HOM05D005490 ORTHO05D006606 6.3e-139 498.4 374 72.5
AUR62001928 Chenopodium quinoa HOM05D005490 ORTHO05D006606 3.2e-135 486.1 479 60.1
FAN26G0668 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.5e-132 477.2 389 71.2
HPP92_004114 Vanilla planifolia HOM05D005490 ORTHO05D006606 2.6e-132 476.5 451 63.9
ATR1102G026 Amborella trichopoda HOM05D005490 ORTHO05D006606 7.2e-127 458.4 454 61.0
FAN23G2111 Fragaria x ananassa HOM05D005490 ORTHO05D006606 7.0e-122 441.8 392 67.9
Sabra05G0112300 Salix brachista HOM05D005490 ORTHO05D006606 2.9e-120 436.4 479 57.6
AUR62003882 Chenopodium quinoa HOM05D005490 ORTHO05D006606 9.8e-116 421.4 475 55.2
unitig_899.g14662 Utricularia gibba HOM05D005490 ORTHO05D006606 3.7e-115 419.5 378 67.5
Ah.03g145080 Amaranthus hybridus HOM05D005490 ORTHO05D006606 6.3e-115 418.7 383 67.6
Mapoly0012s0107 Marchantia polymorpha HOM05D005490 ORTHO05D006606 6.6e-112 408.7 467 53.5
Rhsim08G0100400 Rhododendron simsii HOM05D005490 ORTHO05D006606 5.4e-106 389.0 448 56.5
Sopen02g035470 Solanum pennellii HOM05D005490 ORTHO05D006606 4.5e-105 386.0 241 89.6
Pp3c7_5520 Physcomitrium patens HOM05D005490 ORTHO05D006606 2.7e-97 360.1 475 51.8
MD15G1284300 Malus domestica HOM05D005490 ORTHO05D006606 1.0e-96 358.2 321 67.3
Atru.chr3.327 Acer truncatum HOM05D005490 ORTHO05D006606 4.3e-95 352.8 308 69.5
Hma1.2p1_0461F.1_g157800 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 1.2e-94 351.3 318 66.7
Eucgr.I00926 Eucalyptus grandis HOM05D005490 ORTHO05D006606 1.5e-92 344.4 311 65.9
FvH4_1g16060 Fragaria vesca HOM05D005490 ORTHO05D006606 2.2e-91 340.5 312 69.2
MELO3C020875.2 Cucumis melo HOM05D005490 ORTHO05D006606 1.3e-88 331.3 311 68.2
Pp3c11_20900 Physcomitrium patens HOM05D005490 ORTHO05D006606 5.1e-88 329.3 470 49.1
Dinv39848 Davidia involucrata HOM05D005490 ORTHO05D006606 1.1e-87 328.2 240 74.6
vmacro17955 Vaccinium macrocarpon HOM05D005490 ORTHO05D006606 1.9e-87 327.4 343 62.4
HPP92_004074 Vanilla planifolia HOM05D005490 ORTHO05D006606 6.8e-77 292.4 325 60.6
SEGI_41077 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 3.3e-71 273.5 298 61.7
Actinidia16483 Actinidia chinensis HOM05D005490 ORTHO05D006606 4.8e-62 243.0 289 58.5
Haze_15401 Corylus avellana HOM05D005490 ORTHO05D006606 4.8e-62 243.0 203 68.0
SMO356G0652 Selaginella moellendorffii HOM05D005490 ORTHO05D006606 3.1e-61 240.4 248 57.7
Haze_15403 Corylus avellana HOM05D005490 ORTHO05D006606 1.2e-60 238.4 203 67.0
Zm00001eb019290 Zea mays HOM05D005490 ORTHO05D006606 3.4e-60 236.9 240 56.7
SEGI_00791 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 3.8e-59 233.4 154 74.7
Atru.chr3.328 Acer truncatum HOM05D005490 ORTHO05D006606 1.3e-56 224.9 128 84.4
Cpa.g.sc55.148 Carica papaya HOM05D005490 ORTHO05D006606 3.9e-56 223.4 128 84.4
MD15G1284200 Malus domestica HOM05D005490 ORTHO05D006606 4.5e-52 209.9 128 82.8
Actinidia36493 Actinidia chinensis HOM05D005490 ORTHO05D006606 3.8e-51 206.8 352 44.0
CBR_g38045 Chara braunii HOM05D005490 ORTHO05D000004 1.0e-48 198.7 440 43.0
Actinidia16484 Actinidia chinensis HOM05D005490 ORTHO05D006606 7.4e-39 166.0 84 94.0
AagrBONN_evm.TU.Sc2ySwM_344.4468 Anthoceros agrestis HOM05D005490 ORTHO05D006606 2.2e-38 164.5 470 31.3
VMungo1309G0325 Vigna mungo HOM05D005490 ORTHO05D006606 2.5e-34 151.0 161 54.0
VMungo0720G1861 Vigna mungo HOM05D005490 ORTHO05D006606 3.1e-29 134.0 144 54.2
FAN22G1581 Fragaria x ananassa HOM05D005490 ORTHO05D006606 5.7e-23 113.2 72 76.4
SHI08459 Sapria himalayana HOM05D005490 ORTHO05D006606 9.7e-23 112.5 66 83.3
CDE08G1038 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 1.8e-21 108.2 383 30.8
FAN17G2271 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.8e-21 108.2 66 80.3
Actinidia36494 Actinidia chinensis HOM05D005490 ORTHO05D006606 2.9e-19 100.9 80 71.2
FAN17G1267 Fragaria x ananassa HOM05D005490 ORTHO05D006606 5.5e-18 96.7 64 78.1
VMungo1309G1585 Vigna mungo HOM05D005490 ORTHO05D006606 1.2e-17 95.5 87 59.8
CSS0031445 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 1.0e-16 92.4 80 67.5
VMungo0251G2361 Vigna mungo HOM05D007793 ORTHO05D010104 1.4e-16 92.0 86 55.8
Aqoxy5G01228 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 3.0e-16 90.9 82 63.4
MD02G1172100 Malus domestica HOM05D005490 ORTHO05D006606 5.2e-16 90.1 79 67.1
Atru.chr10.1611 Acer truncatum HOM05D005490 ORTHO05D006606 5.9e-12 76.6 50 72.0
Cre12.g498350 Chlamydomonas reinhardtii HOM05D005490 ORTHO05D006606 4.0e-08 63.9 352 30.7
Mapoly0045s0119 Marchantia polymorpha HOM05D006512 ORTHO05D008027 2.8e-06 57.8 157 28.7


User provided reference genes

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