Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G656.4 Capsicum annuum HOM05D007283 ORTHO05D010540 9.5e-135 483.8 298 100.0
CAN.G656.12 Capsicum annuum HOM05D007283 ORTHO05D022165 9.3e-90 334.3 304 78.3
CAN.G2066.2 Capsicum annuum HOM05D007283 ORTHO05D022165 1.6e-52 210.7 160 78.8
PGSC0003DMG400014570 Solanum tuberosum HOM05D007283 ORTHO05D022165 2.2e-38 163.7 325 46.5
Sopen05g004980 Solanum pennellii HOM05D007283 ORTHO05D022165 6.3e-38 162.2 348 41.1
CAN.G7917.1 Capsicum annuum HOM05D007283 ORTHO05D022165 4.0e-32 142.9 173 56.1
Nitab4.5_0006473g0010 Nicotiana tabacum HOM05D007283 ORTHO05D010540 8.9e-32 141.7 184 50.0
CAN.G2066.1 Capsicum annuum HOM05D007283 ORTHO05D010540 1.7e-30 137.5 68 100.0
CAN.G656.8 Capsicum annuum HOM05D007283 ORTHO05D010540 8.3e-30 135.2 68 98.5
Peaxi162Scf00382g00051 Petunia axillaris HOM05D007283 ORTHO05D010540 5.4e-29 132.5 180 44.4
Nitab4.5_0000874g0090 Nicotiana tabacum HOM05D007283 ORTHO05D010540 2.0e-28 130.6 246 38.6
Peaxi162Scf00382g00052 Petunia axillaris HOM05D007283 ORTHO05D010540 3.5e-28 129.8 184 40.8
Peaxi162Scf00382g00056 Petunia axillaris HOM05D007283 ORTHO05D010540 2.3e-27 127.1 197 40.6
Nitab4.5_0000874g0050 Nicotiana tabacum HOM05D007283 ORTHO05D010540 1.9e-26 124.0 184 44.0
Nitab4.5_0006473g0030 Nicotiana tabacum HOM05D007283 ORTHO05D010540 2.8e-25 120.2 180 43.9
Solyc05g009250.1 Solanum lycopersicum HOM05D007283 ORTHO05D022165 2.6e-23 113.6 155 50.3
CAN.G532.48 Capsicum annuum HOM05D007283 ORTHO05D011204 3.2e-21 106.7 206 36.4
PGSC0003DMG400036385 Solanum tuberosum HOM05D007283 ORTHO05D010540 4.1e-21 106.3 176 39.8
CAN.G656.5 Capsicum annuum HOM05D007283 ORTHO05D010540 3.5e-20 103.2 179 38.0
PGSC0003DMG400012181 Solanum tuberosum HOM05D007283 ORTHO05D011204 2.3e-19 100.5 200 35.5
Nitab4.5_0004762g0030 Nicotiana tabacum HOM05D007283 ORTHO05D011204 3.3e-18 96.7 240 31.7
PGSC0003DMG400012180 Solanum tuberosum HOM05D007283 ORTHO05D010540 4.3e-18 96.3 175 36.6
Nitab4.5_0000584g0030 Nicotiana tabacum HOM05D007283 ORTHO05D011204 1.2e-17 94.7 241 30.3
Nitab4.5_0008537g0020 Nicotiana tabacum HOM05D007283 ORTHO05D011204 1.2e-17 94.7 185 35.1
Solyc08g081650.3 Solanum lycopersicum HOM05D007283 ORTHO05D011204 1.2e-17 94.7 206 33.0
Sopen08g029950 Solanum pennellii HOM05D007283 ORTHO05D011204 1.6e-17 94.4 203 33.5
CAN.G1861.8 Capsicum annuum HOM05D007283 ORTHO05D033971 2.1e-17 94.0 174 35.6
Nitab4.5_0000363g0170 Nicotiana tabacum HOM05D007283 ORTHO05D011204 2.8e-17 93.6 248 29.0
Nitab4.5_0003324g0020 Nicotiana tabacum HOM05D007283 ORTHO05D011204 2.8e-17 93.6 231 31.2
Sopen05g004990 Solanum pennellii HOM05D007283 ORTHO05D010540 2.8e-17 93.6 221 38.5
PGSC0003DMG400012178 Solanum tuberosum HOM05D007283 ORTHO05D011204 2.8e-17 93.6 283 27.2
CAN.G532.78 Capsicum annuum HOM05D007283 ORTHO05D011204 3.6e-17 93.2 211 30.3
CAN.G1902.5 Capsicum annuum HOM05D007283 ORTHO05D010540 4.7e-17 92.8 155 40.0
Nitab4.5_0002297g0120 Nicotiana tabacum HOM05D007283 ORTHO05D011204 4.7e-17 92.8 241 29.9
CAN.G1902.1 Capsicum annuum HOM05D007283 ORTHO05D010540 6.2e-17 92.4 154 40.9
CAN.G532.52 Capsicum annuum HOM05D007283 ORTHO05D011204 8.1e-17 92.0 172 35.5
PGSC0003DMG400012179 Solanum tuberosum HOM05D007283 ORTHO05D011204 8.1e-17 92.0 186 31.2
CAN.G656.1 Capsicum annuum HOM05D007283 ORTHO05D010540 1.1e-16 91.7 154 40.9
CAN.G656.2 Capsicum annuum HOM05D007283 ORTHO05D010540 1.4e-16 91.3 154 40.3
CAN.G656.7 Capsicum annuum HOM05D007283 ORTHO05D010540 1.8e-16 90.9 158 38.6
CAN.G1902.2 Capsicum annuum HOM05D007283 ORTHO05D010540 6.8e-16 89.0 155 38.1
Nitab4.5_0003324g0010 Nicotiana tabacum HOM05D007283 ORTHO05D011204 6.8e-16 89.0 324 27.8
CAN.G532.49 Capsicum annuum HOM05D007283 ORTHO05D011204 1.5e-15 87.8 208 31.7
CAN.G1902.3 Capsicum annuum HOM05D007283 ORTHO05D010540 2.0e-15 87.4 154 39.0
Peaxi162Scf00074g01728 Petunia axillaris HOM05D007283 ORTHO05D011204 2.0e-15 87.4 291 28.5
CAN.G656.9 Capsicum annuum HOM05D007283 ORTHO05D010540 3.4e-15 86.7 67 61.2
CAN.G656.3 Capsicum annuum HOM05D007283 ORTHO05D010540 4.4e-15 86.3 155 38.1
CAN.G532.50 Capsicum annuum HOM05D007283 ORTHO05D011204 9.8e-15 85.1 208 33.7
Peaxi162Scf00071g00106 Petunia axillaris HOM05D007283 ORTHO05D011204 1.3e-14 84.7 208 31.2
Oeu039272.1 Olea europaea HOM05D007283 ORTHO05D010540 1.7e-14 84.3 176 37.5
Peaxi162Scf00311g00051 Petunia axillaris HOM05D007283 ORTHO05D011204 2.2e-14 84.0 232 30.6
CAN.G656.6 Capsicum annuum HOM05D007283 ORTHO05D010540 2.9e-14 83.6 159 36.5
CAN.G610.91 Capsicum annuum HOM05D007283 ORTHO05D010540 4.9e-14 82.8 155 36.1
Sopen08g029960 Solanum pennellii HOM05D007283 ORTHO05D011204 3.2e-13 80.1 189 27.5
Oeu039277.1 Olea europaea HOM05D007283 ORTHO05D010540 1.6e-12 77.8 287 30.0
Peaxi162Scf00071g00102 Petunia axillaris HOM05D007283 ORTHO05D011204 6.0e-12 75.9 316 28.8
Nitab4.5_0000584g0020 Nicotiana tabacum HOM05D007283 ORTHO05D011204 7.8e-12 75.5 200 28.0
MSTRG.2237 Avicennia marina HOM05D007283 ORTHO05D010540 3.0e-11 73.6 172 34.3
PGSC0003DMG400014569 Solanum tuberosum HOM05D007283 ORTHO05D010540 3.0e-11 73.6 48 68.8
Cc05_g13430 Coffea canephora HOM05D007283 ORTHO05D010540 5.1e-11 72.8 260 30.8
Peaxi162Scf00071g01046 Petunia axillaris HOM05D007283 ORTHO05D011204 5.1e-11 72.8 279 26.9
Peaxi162Scf00057g00526 Petunia axillaris HOM05D007283 ORTHO05D011204 6.6e-11 72.4 233 28.3
Migut.E00336 Erythranthe guttata HOM05D007283 ORTHO05D010540 9.5e-10 68.6 172 33.7
Hma1.2p1_0061F.1_g033990 Hydrangea macrophylla HOM05D000497 ORTHO05D002300 1.2e-09 68.2 177 32.2
Nitab4.5_0000874g0070 Nicotiana tabacum HOM05D007283 ORTHO05D010540 1.2e-09 68.2 71 54.9
Peaxi162Scf00382g00511 Petunia axillaris HOM05D007283 ORTHO05D010540 1.6e-09 67.8 80 51.2
SalBow8G2743 Salvia bowleyana HOM05D007283 ORTHO05D010540 1.4e-08 64.7 171 46.2
CAN.G532.51 Capsicum annuum HOM05D007283 ORTHO05D011204 3.1e-08 63.5 151 41.7
HanXRQChr17g0552041 Helianthus annuus HOM05D000497 ORTHO05D002300 1.2e-07 61.6 195 31.8
HanXRQChr15g0476341 Helianthus annuus HOM05D000497 ORTHO05D002300 2.6e-07 60.5 35 80.0
Migut.E00337 Erythranthe guttata HOM05D007283 ORTHO05D010540 4.4e-07 59.7 190 32.6
SMO145G0081 Selaginella moellendorffii HOM05D000233 ORTHO05D000020 4.4e-07 59.7 59 55.9
PGSC0003DMG400043801 Solanum tuberosum HOM05D007283 ORTHO05D010540 4.4e-07 59.7 73 49.3
vmacro10554 Vaccinium macrocarpon HOM05D000497 ORTHO05D010540 4.4e-07 59.7 175 30.3
HanXRQChr08g0213831 Helianthus annuus HOM05D000497 ORTHO05D002300 7.6e-07 58.9 61 47.5
Lsat_1_v5_gn_3_59341 Lactuca sativa HOM05D000497 ORTHO05D002300 7.6e-07 58.9 92 44.6
Lj5g0018780 Lotus japonicus HOM05D000497 ORTHO05D002300 7.6e-07 58.9 99 42.4
Nitab4.5_0006473g0050 Nicotiana tabacum HOM05D007283 ORTHO05D010540 7.6e-07 58.9 62 53.2
Phvul.007G027000 Phaseolus vulgaris HOM05D000497 ORTHO05D002300 7.6e-07 58.9 35 80.0
Peaxi162Scf00382g00043 Petunia axillaris HOM05D000497 ORTHO05D002300 9.9e-07 58.5 74 48.6
Sc11g0003320 Simmondsia chinensis HOM05D000497 ORTHO05D002300 9.9e-07 58.5 35 77.1
RcHm_v2.0_Chr4g0435261 Rosa chinensis HOM05D000497 ORTHO05D002300 1.3e-06 58.2 35 74.3
Glyma.20G115300 Glycine max HOM05D000497 ORTHO05D002300 1.7e-06 57.8 35 77.1
Lalb_Chr21g0308961 Lupinus albus HOM05D000497 ORTHO05D002300 1.7e-06 57.8 86 44.2
Dinv31642 Davidia involucrata HOM05D000497 ORTHO05D002300 2.2e-06 57.4 173 31.8
ECA234G0409 Erigeron canadensis HOM05D000497 ORTHO05D002300 2.2e-06 57.4 49 59.2
Lalb_Chr02g0146021 Lupinus albus HOM05D000497 ORTHO05D002300 2.2e-06 57.4 85 43.5
DCAR_007241 Daucus carota HOM05D000497 ORTHO05D002300 2.9e-06 57.0 66 48.5
ECA246G1557 Erigeron canadensis HOM05D000497 ORTHO05D002300 2.9e-06 57.0 34 79.4
FvH4_4g27491 Fragaria vesca HOM05D000497 ORTHO05D002300 2.9e-06 57.0 35 71.4
FAN07G1058 Fragaria x ananassa HOM05D000497 ORTHO05D002300 2.9e-06 57.0 35 71.4
FAN07G1594 Fragaria x ananassa HOM05D000497 ORTHO05D002300 2.9e-06 57.0 35 71.4
Peaxi162Scf00071g01020 Petunia axillaris HOM05D007283 ORTHO05D011204 2.9e-06 57.0 290 25.2
Sed0011928 Sechium edule HOM05D000497 ORTHO05D002300 2.9e-06 57.0 34 76.5
Sed0019940 Sechium edule HOM05D000497 ORTHO05D002300 2.9e-06 57.0 34 76.5
Sopen05g005260 Solanum pennellii HOM05D000497 ORTHO05D002300 2.9e-06 57.0 34 73.5
HanXRQChr02g0039841 Helianthus annuus HOM05D000497 ORTHO05D002300 3.8e-06 56.6 118 35.6
Lalb_Chr06g0166131 Lupinus albus HOM05D000497 ORTHO05D002300 3.8e-06 56.6 62 51.6
Medtr8g023700 Medicago truncatula HOM05D000245 ORTHO05D002300 3.8e-06 56.6 66 51.5
Oeu035422.1 Olea europaea HOM05D000497 ORTHO05D002300 3.8e-06 56.6 34 76.5
SGA_v2.0_scaffold14G06859 Striga asiatica HOM05D000497 ORTHO05D010540 3.8e-06 56.6 172 30.8
CSS0005103 Camellia sinensis var. sinensis HOM05D000497 ORTHO05D002300 4.9e-06 56.2 41 68.3
CSS0037642 Camellia sinensis var. sinensis HOM05D000497 ORTHO05D002300 4.9e-06 56.2 41 68.3
Glyma.10G274600 Glycine max HOM05D000497 ORTHO05D002300 4.9e-06 56.2 35 77.1
Lsat_1_v5_gn_4_17901 Lactuca sativa HOM05D000497 ORTHO05D002300 4.9e-06 56.2 35 71.4
Lj2g0001611 Lotus japonicus HOM05D000497 ORTHO05D002300 4.9e-06 56.2 79 44.3
Peaxi162Scf00071g01045 Petunia axillaris HOM05D007283 ORTHO05D011204 4.9e-06 56.2 35 74.3
Peaxi162Scf00071g01047 Petunia axillaris HOM05D007283 ORTHO05D011204 4.9e-06 56.2 34 73.5
Potri.005G219600 Populus trichocarpa HOM05D000233 ORTHO05D000020 4.9e-06 56.2 61 54.1
Solyc04g009450.1 Solanum lycopersicum HOM05D007283 ORTHO05D033971 4.9e-06 56.2 61 44.3
Sopen04g004580 Solanum pennellii HOM05D007283 ORTHO05D033971 4.9e-06 56.2 61 44.3
SGA_v2.0_scaffold170G38757 Striga asiatica HOM05D000497 ORTHO05D002300 4.9e-06 56.2 55 60.0
unitig_8.g3979 Utricularia gibba HOM05D000497 ORTHO05D010540 4.9e-06 56.2 175 30.9
VMungo0720G1796 Vigna mungo HOM05D000497 ORTHO05D002300 4.9e-06 56.2 163 31.9
Ah.08g221430 Amaranthus hybridus HOM05D000497 ORTHO05D002300 6.4e-06 55.8 151 35.1
Thhalv10012016m.g Eutrema salsugineum HOM05D000497 ORTHO05D018466 6.4e-06 55.8 52 57.7
Lalb_Chr10g0099991 Lupinus albus HOM05D000497 ORTHO05D002300 6.4e-06 55.8 58 53.4
Lalb_Chr17g0342111 Lupinus albus HOM05D000497 ORTHO05D002300 6.4e-06 55.8 58 51.7
MD14G1226300 Malus domestica HOM05D000497 ORTHO05D013080 6.4e-06 55.8 38 68.4
Peaxi162Scf00071g01029 Petunia axillaris HOM05D007283 ORTHO05D011204 6.4e-06 55.8 35 68.6
unitig_27.g25191 Utricularia gibba HOM05D000497 ORTHO05D002300 6.4e-06 55.8 35 71.4
arahy.Tifrunner.gnm1.ann1.VG3SGX Arachis hypogaea HOM05D000497 ORTHO05D002300 8.4e-06 55.5 71 52.1
MSTRG.13529 Avicennia marina HOM05D007283 ORTHO05D010540 8.4e-06 55.5 109 39.4
MSTRG.7670 Avicennia marina HOM05D000497 ORTHO05D002300 8.4e-06 55.5 34 73.5
Carub.0005s2832 Capsella rubella HOM05D000497 ORTHO05D000020 8.4e-06 55.5 48 62.5
MELO3C006333.2 Cucumis melo HOM05D000245 ORTHO05D002300 8.4e-06 55.5 34 70.6
CsaV3_3G011230 Cucumis sativus L. HOM05D000245 ORTHO05D002300 8.4e-06 55.5 34 70.6
Dinv28094 Davidia involucrata HOM05D000497 ORTHO05D002300 8.4e-06 55.5 34 73.5
Oeu027683.1 Olea europaea HOM05D000497 ORTHO05D002300 8.4e-06 55.5 48 58.3
Sed0001080 Sechium edule HOM05D000497 ORTHO05D002300 8.4e-06 55.5 35 74.3
Sed0002522 Sechium edule HOM05D000497 ORTHO05D002300 8.4e-06 55.5 43 60.5


User provided reference genes

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