Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 3.2e-93 345.1 181 100.0
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 3.3e-74 282.0 178 84.3
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 3.7e-73 278.5 169 88.8
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 2.4e-72 275.8 178 82.0
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 8.5e-70 267.3 170 85.9
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 5.5e-69 264.6 169 85.8
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 3.2e-61 238.8 173 74.6
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 2.1e-60 236.1 162 75.9
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 1.4e-59 233.4 173 72.8
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 1.8e-59 233.0 152 80.3
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 3.0e-59 232.3 154 77.9
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 5.2e-59 231.5 172 71.5
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 5.2e-59 231.5 162 75.3
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 1.5e-58 229.9 153 79.1
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 2.0e-58 229.6 166 74.1
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 2.0e-58 229.6 152 79.6
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 2.6e-58 229.2 152 77.6
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 3.3e-58 228.8 163 72.4
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 4.4e-58 228.4 163 73.0
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 4.4e-58 228.4 152 79.6
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 1.3e-57 226.9 171 70.8
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 2.8e-57 225.7 163 71.8
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 3.7e-57 225.3 163 71.8
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 3.7e-57 225.3 163 71.8
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 4.8e-57 224.9 169 70.4
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 8.3e-57 224.2 171 71.9
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 1.1e-56 223.8 152 77.0
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 1.4e-56 223.4 152 77.0
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.4e-56 223.4 151 77.5
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 1.4e-56 223.4 151 77.5
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.8e-56 223.0 151 77.5
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 1.8e-56 223.0 152 76.3
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 3.1e-56 222.2 151 76.8
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 4.1e-56 221.9 151 76.8
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 5.3e-56 221.5 151 76.8
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 7.0e-56 221.1 152 77.6
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 7.0e-56 221.1 152 75.7
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 7.0e-56 221.1 169 72.2
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 9.1e-56 220.7 151 75.5
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 1.2e-55 220.3 152 75.0
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 1.2e-55 220.3 168 70.2
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 1.2e-55 220.3 159 71.1
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 1.6e-55 219.9 152 75.0
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 2.0e-55 219.5 151 75.5
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 2.7e-55 219.2 168 69.6
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 2.7e-55 219.2 151 76.2
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 2.7e-55 219.2 152 75.0
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 3.5e-55 218.8 175 67.4
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 3.5e-55 218.8 151 76.2
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.5e-55 218.8 151 76.2
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.5e-55 218.8 151 76.2
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 4.5e-55 218.4 153 74.5
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 4.5e-55 218.4 151 74.2
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 7.7e-55 217.6 151 73.5
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 1.0e-54 217.2 152 74.3
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 1.0e-54 217.2 172 68.0
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 1.3e-54 216.9 151 75.5
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 1.3e-54 216.9 152 75.0
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 2.9e-54 215.7 152 73.7
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 3.8e-54 215.3 152 73.7
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 3.8e-54 215.3 176 67.0
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 5.0e-54 214.9 152 72.4
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 8.5e-54 214.2 152 73.0
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 1.1e-53 213.8 152 71.7
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 1.5e-53 213.4 152 73.7
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 1.5e-53 213.4 152 73.7
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 1.5e-53 213.4 152 73.7
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 1.5e-53 213.4 152 73.7
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 1.5e-53 213.4 152 73.7
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 2.5e-53 212.6 152 73.0
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 2.5e-53 212.6 151 73.5
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 3.2e-53 212.2 152 74.3
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 3.2e-53 212.2 151 71.5
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 4.2e-53 211.8 152 73.7
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 5.5e-53 211.5 151 72.8
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 5.5e-53 211.5 152 71.1
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 9.4e-53 210.7 151 72.2
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 1.2e-52 210.3 152 71.7
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 1.2e-52 210.3 151 72.8
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 1.2e-52 210.3 152 73.0
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 2.1e-52 209.5 151 72.2
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 3.6e-52 208.8 152 71.1
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 3.6e-52 208.8 152 71.1
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 3.6e-52 208.8 151 70.2
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 4.7e-52 208.4 151 71.5
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 8.0e-52 207.6 159 71.1
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 8.0e-52 207.6 154 70.8
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 3.0e-51 205.7 151 70.9
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 3.0e-51 205.7 185 61.1
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 3.0e-51 205.7 185 61.1
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 4.0e-51 205.3 184 60.9
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 6.8e-51 204.5 151 70.9
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 8.8e-51 204.1 152 70.4
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 4.4e-50 201.8 152 67.8
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 4.4e-50 201.8 156 69.9
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 1.6e-47 193.4 163 62.6
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 2.7e-47 192.6 151 64.2
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 5.0e-46 188.3 139 69.8
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 1.3e-38 163.7 131 65.6
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 2.5e-37 159.5 108 83.3
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 3.6e-36 155.6 152 59.2
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 9.2e-32 141.0 151 49.0
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 2.0e-31 139.8 173 45.1
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 1.7e-30 136.7 148 48.6
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 1.9e-29 133.3 109 66.1
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 1.8e-27 126.7 147 47.6
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 2.3e-27 126.3 90 74.4
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 7.5e-26 121.3 132 56.8
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 6.6e-22 108.2 160 37.5
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 5.2e-11 72.0 54 70.4
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 6.6e-06 55.1 144 27.8


User provided reference genes

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