Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G650.32 Capsicum annuum HOM05D006343 ORTHO05D005694 1.6e-169 599.4 310 100.0
CAN.G650.35 Capsicum annuum HOM05D006343 ORTHO05D005694 3.6e-129 465.3 304 79.6
CAN.G2424.1 Capsicum annuum HOM05D006343 ORTHO05D005694 3.1e-128 462.2 335 74.3
CAN.G650.25 Capsicum annuum HOM05D006343 ORTHO05D005694 6.0e-108 394.8 313 69.3
CAN.G650.28 Capsicum annuum HOM05D006343 ORTHO05D005694 6.7e-91 338.2 304 66.1
Nitab4.5_0001040g0020 Nicotiana tabacum HOM05D006343 ORTHO05D005694 2.8e-57 226.5 339 49.0
CAN.G342.1 Capsicum annuum HOM05D006343 ORTHO05D005694 6.3e-57 225.3 173 76.3
CAN.G526.2 Capsicum annuum HOM05D006343 ORTHO05D005694 2.7e-55 219.9 173 70.5
Nitab4.5_0001655g0110 Nicotiana tabacum HOM05D006343 ORTHO05D005694 1.9e-53 213.8 342 49.1
Solyc02g070700.3 Solanum lycopersicum HOM05D006343 ORTHO05D005694 3.3e-53 213.0 327 50.2
Sopen02g019780 Solanum pennellii HOM05D006343 ORTHO05D005694 1.6e-52 210.7 329 49.8
PGSC0003DMG400008290 Solanum tuberosum HOM05D006343 ORTHO05D005694 2.0e-34 150.6 213 53.5
Dinv43841 Davidia involucrata HOM05D006343 ORTHO05D005694 1.8e-27 127.5 322 36.0
Ciclev10021525m.g Citrus clementina HOM05D006343 ORTHO05D005694 8.9e-27 125.2 328 35.4
Actinidia20887 Actinidia chinensis HOM05D006343 ORTHO05D005694 2.0e-26 124.0 322 34.5
Nitab4.5_0003369g0030 Nicotiana tabacum HOM05D006343 ORTHO05D005694 4.4e-26 122.9 331 37.2
Oeu055797.1 Olea europaea HOM05D006343 ORTHO05D005694 4.1e-24 116.3 329 32.2
Sabra14G0063500 Salix brachista HOM05D006343 ORTHO05D005694 4.6e-23 112.8 328 32.0
Potri.014G087500 Populus trichocarpa HOM05D006343 ORTHO05D005694 1.7e-22 110.9 326 32.5
Nitab4.5_0002749g0010 Nicotiana tabacum HOM05D006343 ORTHO05D005694 1.1e-21 108.2 334 34.4
MSTRG.18339 Avicennia marina HOM05D006343 ORTHO05D005694 1.5e-21 107.8 317 34.4
SalBow6G3791 Salvia bowleyana HOM05D006343 ORTHO05D005694 5.6e-21 105.9 329 32.5
TAR629G3314 Trochodendron aralioides HOM05D006343 ORTHO05D005694 7.3e-21 105.5 323 31.9
Rhsim01G0164400 Rhododendron simsii HOM05D006343 ORTHO05D005694 1.2e-20 104.8 328 30.8
Manes.01G254700 Manihot esculenta HOM05D006343 ORTHO05D005694 1.6e-20 104.4 333 30.0
MSTRG.12522 Avicennia marina HOM05D006343 ORTHO05D005694 1.1e-19 101.7 330 31.5
Potri.002G161700 Populus trichocarpa HOM05D006343 ORTHO05D005694 1.1e-19 101.7 326 30.1
GSVIVG01026998001 Vitis vinifera HOM05D006343 ORTHO05D005694 1.1e-19 101.7 327 32.4
Manes.05G031900 Manihot esculenta HOM05D006343 ORTHO05D005694 1.5e-18 97.8 335 30.7
Hma1.2p1_0702F.1_g206150 Hydrangea macrophylla HOM05D006343 ORTHO05D005694 3.4e-18 96.7 319 32.0
Oeu035725.1 Olea europaea HOM05D003054 ORTHO05D003376 3.4e-18 96.7 314 31.5
Oeu035731.1 Olea europaea HOM05D006343 ORTHO05D005694 3.4e-18 96.7 324 32.4
Sabra02G0128600 Salix brachista HOM05D006343 ORTHO05D005694 3.4e-18 96.7 324 31.2
CiPaw.01G064000 Carya illinoinensis HOM05D006343 ORTHO05D005694 7.6e-18 95.5 248 31.0
Prupe.2G173800 Prunus persica HOM05D006343 ORTHO05D005694 9.9e-18 95.1 327 31.5
Atru.chr5.528 Acer truncatum HOM05D006343 ORTHO05D005694 1.7e-17 94.4 328 30.8
CiPaw.02G033200 Carya illinoinensis HOM05D006343 ORTHO05D005694 1.7e-17 94.4 345 30.1
vmacro20912 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 6.4e-17 92.4 345 27.0
Dinv32502 Davidia involucrata HOM05D006343 ORTHO05D005694 8.4e-17 92.0 251 35.9
FAN01G0301 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.2e-15 88.2 329 28.3
FAN03G1905 Fragaria x ananassa HOM05D006343 ORTHO05D005694 2.7e-15 87.0 328 28.0
vmacro20913 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 2.7e-15 87.0 338 27.5
PGR042G0313 Punica granatum HOM05D006343 ORTHO05D005694 4.6e-15 86.3 198 34.8
VMungo0331G0061 Vigna mungo HOM05D006343 ORTHO05D005694 4.6e-15 86.3 325 30.8
FAN10G0914 Fragaria x ananassa HOM05D006343 ORTHO05D005694 6.0e-15 85.9 326 29.4
Lsat_1_v5_gn_7_4100 Lactuca sativa HOM05D006343 ORTHO05D005694 6.0e-15 85.9 334 28.7
FAN10G3829 Fragaria x ananassa HOM05D006343 ORTHO05D005694 7.8e-15 85.5 326 29.1
Rhsim06G0236200 Rhododendron simsii HOM05D006343 ORTHO05D005694 1.3e-14 84.7 325 28.3
SGA_v2.0_scaffold1G00635 Striga asiatica HOM05D006343 ORTHO05D005694 1.3e-14 84.7 345 27.8
CANSAT56G2487 Cannabis sativa HOM05D006343 ORTHO05D005694 2.3e-14 84.0 342 30.7
Lsat_1_v5_gn_7_4060 Lactuca sativa HOM05D006343 ORTHO05D005694 2.3e-14 84.0 328 29.9
Oeu035722.1 Olea europaea HOM05D006343 ORTHO05D005694 6.6e-14 82.4 320 28.8
CSS0004449 Camellia sinensis var. sinensis HOM05D006343 ORTHO05D005694 8.7e-14 82.0 329 29.5
RcHm_v2.0_Chr1g0357021 Rosa chinensis HOM05D006343 ORTHO05D005694 8.7e-14 82.0 329 28.9
QL04p054168 Quercus lobata HOM05D006343 ORTHO05D005694 7.3e-13 79.0 241 29.5
Phvul.010G101000 Phaseolus vulgaris HOM05D006343 ORTHO05D005694 9.6e-13 78.6 325 28.3
Glyma.07G068200 Glycine max HOM05D006343 ORTHO05D005694 1.6e-12 77.8 342 28.7
Oeu035719.1 Olea europaea HOM05D003054 ORTHO05D003376 2.8e-12 77.0 294 29.3
FAN06G0921 Fragaria x ananassa HOM05D006343 ORTHO05D005694 3.6e-12 76.6 329 27.1
FvH4_7g14980 Fragaria vesca HOM05D006343 ORTHO05D005694 4.8e-12 76.3 329 27.1
Rhsim01G0164000 Rhododendron simsii HOM05D006343 ORTHO05D005694 4.8e-12 76.3 338 27.2
MD07G1133500 Malus domestica HOM05D006343 ORTHO05D005694 6.2e-12 75.9 329 26.4
Cc02_g38320 Coffea canephora HOM05D006343 ORTHO05D005694 1.1e-11 75.1 333 28.8
Eucgr.I00992 Eucalyptus grandis HOM05D006343 ORTHO05D005694 3.1e-11 73.6 330 28.8
MD01G1067400 Malus domestica HOM05D006343 ORTHO05D005694 5.3e-11 72.8 341 26.1
unitig_22.g5289 Utricularia gibba HOM05D006343 ORTHO05D005694 2.6e-10 70.5 317 29.7
Glyma.16G034200 Glycine max HOM05D006343 ORTHO05D005694 3.4e-10 70.1 350 26.9
FvH4_7g14870 Fragaria vesca HOM05D006343 ORTHO05D005694 5.8e-10 69.3 329 28.0
Nn1g01591 Nelumbo nucifera HOM05D006343 ORTHO05D005694 7.6e-10 68.9 340 27.6
FAN10G3557 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.3e-09 68.2 334 27.2
CsaV3_6G000720 Cucumis sativus L. HOM05D006343 ORTHO05D005694 1.7e-09 67.8 332 27.7
DCAR_015701 Daucus carota HOM05D006343 ORTHO05D005694 2.9e-09 67.0 321 29.9
FAN06G4353 Fragaria x ananassa HOM05D006343 ORTHO05D005694 3.8e-09 66.6 330 27.6
FAN03G1311 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.1e-08 65.1 334 26.3
FAN06G0140 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.4e-08 64.7 327 27.2
MELO3C021196.2 Cucumis melo HOM05D006343 ORTHO05D005694 3.2e-08 63.5 330 30.6
CARHR248400 Cardamine hirsuta HOM05D012121 ORTHO05D005694 1.2e-07 61.6 342 26.6
FvH4_7g14880 Fragaria vesca HOM05D006343 ORTHO05D005694 3.5e-07 60.1 165 27.9
FAN06G3127 Fragaria x ananassa HOM05D006343 ORTHO05D005694 3.5e-07 60.1 160 27.5
Aqoxy7G00256 Aquilegia oxysepala HOM05D006343 ORTHO05D005694 4.6e-07 59.7 342 27.2
FAN10G3545 Fragaria x ananassa HOM05D006343 ORTHO05D005694 4.6e-07 59.7 342 27.2
ECA233G1044 Erigeron canadensis HOM05D006343 ORTHO05D005694 6.0e-07 59.3 341 26.4
FAN10G3360 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.0e-06 58.5 171 26.3
Lalb_Chr17g0339411 Lupinus albus HOM05D006343 ORTHO05D005694 1.0e-06 58.5 330 25.2
CDE02G1832 Ceratophyllum demersum HOM05D006343 ORTHO05D005694 1.8e-06 57.8 224 26.3
TPR.G17916 Trifolium pratense HOM05D006343 ORTHO05D005694 1.8e-06 57.8 61 50.8
unitig_8.g3737 Utricularia gibba HOM05D006343 ORTHO05D005694 3.9e-06 56.6 322 30.1
DCAR_015699 Daucus carota HOM05D006343 ORTHO05D005694 6.7e-06 55.8 316 26.3
Oeu035728.1 Olea europaea HOM05D006343 ORTHO05D005694 6.7e-06 55.8 295 27.1


User provided reference genes

Program Settings