Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G650.23 Capsicum annuum HOM05D005716 ORTHO05D007885 4.4e-150 534.6 277 100.0
Solyc02g070670.4 Solanum lycopersicum HOM05D005716 ORTHO05D007885 1.8e-143 512.7 278 95.0
Sopen02g019750 Solanum pennellii HOM05D005716 ORTHO05D007885 2.3e-143 512.3 279 95.7
PGSC0003DMG400008287 Solanum tuberosum HOM05D005716 ORTHO05D007885 4.4e-142 508.1 255 97.3
Nitab4.5_0005219g0060 Nicotiana tabacum HOM05D005716 ORTHO05D007885 1.8e-140 502.7 278 92.4
Peaxi162Scf00022g00310 Petunia axillaris HOM05D005716 ORTHO05D007885 1.0e-138 496.9 255 93.3
Atru.chr10.1272 Acer truncatum HOM05D005716 ORTHO05D007885 2.3e-135 485.7 254 92.5
EL10Ac8g19740 Beta vulgaris HOM05D005716 ORTHO05D007885 3.0e-135 485.3 251 92.4
MD10G1263700 Malus domestica HOM05D005716 ORTHO05D007885 3.0e-135 485.3 251 93.6
Nn3g20701 Nelumbo nucifera HOM05D005716 ORTHO05D007885 6.8e-135 484.2 253 90.9
QL05p058825 Quercus lobata HOM05D005716 ORTHO05D007885 6.8e-135 484.2 252 91.7
Thecc.06G152400 Theobroma cacao HOM05D005716 ORTHO05D007885 6.8e-135 484.2 251 92.4
QL05p058849 Quercus lobata HOM05D005716 ORTHO05D007885 2.0e-134 482.6 252 91.3
Aqoxy4G00105 Aquilegia oxysepala HOM05D005716 ORTHO05D007885 2.6e-134 482.3 254 90.9
TWI09G1196 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 2.6e-134 482.3 277 88.4
RcHm_v2.0_Chr5g0013751 Rosa chinensis HOM05D005716 ORTHO05D007885 3.4e-134 481.9 255 91.0
COL.COLO4_31094 Corchorus olitorius HOM05D005716 ORTHO05D007885 7.5e-134 480.7 253 90.9
MD05G1285700 Malus domestica HOM05D005716 ORTHO05D007885 9.8e-134 480.3 275 90.2
Lj1A1186G50 Lonicera japonica HOM05D005716 ORTHO05D007885 1.3e-133 479.9 251 92.0
C04p63810 Brassica napus HOM05D005716 ORTHO05D007885 1.7e-133 479.6 250 90.8
BraA04t18144Z Brassica rapa HOM05D005716 ORTHO05D007885 1.7e-133 479.6 250 90.8
Aa31LG10G6910 Aethionema arabicum HOM05D005716 ORTHO05D007885 2.2e-133 479.2 255 89.8
arahy.Tifrunner.gnm1.ann1.MD42KV Arachis hypogaea HOM05D005716 ORTHO05D007885 2.2e-133 479.2 255 89.0
PGR042G3684 Punica granatum HOM05D005716 ORTHO05D007885 2.2e-133 479.2 254 90.6
CiPaw.09G125500 Carya illinoinensis HOM05D005716 ORTHO05D007885 2.8e-133 478.8 249 92.0
Ciclev10016173m.g Citrus clementina HOM05D005716 ORTHO05D007885 2.8e-133 478.8 254 89.0
Glyma.08G084800 Glycine max HOM05D005716 ORTHO05D007885 2.8e-133 478.8 252 90.1
Carub.0004s1614 Capsella rubella HOM05D005716 ORTHO05D007885 3.7e-133 478.4 277 85.2
MBI07_g26370_MAGBIO Magnolia biondii HOM05D005716 ORTHO05D007885 3.7e-133 478.4 251 91.2
CARHR128550 Cardamine hirsuta HOM05D005716 ORTHO05D007885 4.9e-133 478.0 250 90.8
Sc05g0006370 Simmondsia chinensis HOM05D005716 ORTHO05D007885 4.9e-133 478.0 248 91.9
TAR627G0480 Trochodendron aralioides HOM05D005716 ORTHO05D007885 4.9e-133 478.0 251 90.8
GSVIVG01021429001 Vitis vinifera HOM05D005716 ORTHO05D007885 4.9e-133 478.0 254 89.0
BcaB06g28772 Brassica carinata HOM05D005716 ORTHO05D007885 6.3e-133 477.6 249 90.8
BolC4t27848H Brassica oleracea HOM05D005716 ORTHO05D007885 6.3e-133 477.6 249 90.8
MBI07_g15285_MAGBIO Magnolia biondii HOM05D005716 ORTHO05D007885 6.3e-133 477.6 255 89.8
Manes.17G068800 Manihot esculenta HOM05D005716 ORTHO05D007885 6.3e-133 477.6 252 90.5
THA.LOC104812667 Tarenaya hassleriana HOM05D005716 ORTHO05D007885 6.3e-133 477.6 277 87.4
Duzib235G0716 Durio zibethinus HOM05D005716 ORTHO05D007885 8.3e-133 477.2 251 90.4
arahy.Tifrunner.gnm1.ann1.16PV68 Arachis hypogaea HOM05D005716 ORTHO05D007885 1.4e-132 476.5 251 90.0
Prupe.4G079000 Prunus persica HOM05D005716 ORTHO05D007885 1.4e-132 476.5 251 92.0
AL4G30440 Arabidopsis lyrata HOM05D005716 ORTHO05D007885 1.8e-132 476.1 250 90.4
Cc09_g09370 Coffea canephora HOM05D005716 ORTHO05D007885 1.8e-132 476.1 255 89.4
FvH4_3g05780 Fragaria vesca HOM05D005716 ORTHO05D007885 2.4e-132 475.7 255 90.2
FAN11G1575 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.4e-132 475.7 255 90.2
Sabra02G0185400 Salix brachista HOM05D005716 ORTHO05D007885 2.4e-132 475.7 277 87.0
Thhalv10017058m.g Eutrema salsugineum HOM05D005716 ORTHO05D007885 3.1e-132 475.3 249 91.2
FAN21G0047 Fragaria x ananassa HOM05D005716 ORTHO05D007885 4.1e-132 474.9 255 89.8
Potri.002G243500 Populus trichocarpa HOM05D005716 ORTHO05D007885 4.1e-132 474.9 254 89.8
Potri.002G243700 Populus trichocarpa HOM05D005716 ORTHO05D007885 4.1e-132 474.9 254 89.8
Sp4g16740 Schrenkiella parvula HOM05D005716 ORTHO05D007885 7.0e-132 474.2 247 91.1
AT2G34470 Arabidopsis thaliana HOM05D005716 ORTHO05D007885 9.1e-132 473.8 249 90.4
Rhsim07G0173200 Rhododendron simsii HOM05D005716 ORTHO05D007885 1.2e-131 473.4 261 88.9
DCAR_005122 Daucus carota HOM05D005716 ORTHO05D007885 1.6e-131 473.0 255 89.0
Actinidia07685 Actinidia chinensis HOM05D005716 ORTHO05D007885 2.0e-131 472.6 254 89.8
FAN16G2159 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.0e-131 472.6 255 89.4
VMungo0251G2847 Vigna mungo HOM05D005716 ORTHO05D007885 2.7e-131 472.2 249 90.0
CDE02G4127 Ceratophyllum demersum HOM05D005716 ORTHO05D007885 4.5e-131 471.5 250 89.6
AUR62027525 Chenopodium quinoa HOM05D005716 ORTHO05D007885 4.5e-131 471.5 244 93.9
Ca_18267_v3 Cicer arietinum L. HOM05D005716 ORTHO05D007885 5.9e-131 471.1 254 88.2
ECA232G4567 Erigeron canadensis HOM05D005716 ORTHO05D007885 5.9e-131 471.1 278 87.4
Gorai.011G042600 Gossypium raimondii HOM05D005716 ORTHO05D007885 5.9e-131 471.1 282 87.6
SalBow7G1512 Salvia bowleyana HOM05D005716 ORTHO05D007885 5.9e-131 471.1 252 90.1
Gohir.D10G040400 Gossypium hirsutum HOM05D005716 ORTHO05D007885 1.0e-130 470.3 250 90.4
Lalb_Chr07g0188621 Lupinus albus HOM05D005716 ORTHO05D007885 1.0e-130 470.3 250 90.0
SGA_v2.0_scaffold106G30642 Striga asiatica HOM05D005716 ORTHO05D007885 1.0e-130 470.3 249 89.6
Oeu030916.2 Olea europaea HOM05D005716 ORTHO05D007885 1.3e-130 469.9 299 83.9
HanXRQChr08g0230021 Helianthus annuus HOM05D005716 ORTHO05D007885 1.7e-130 469.5 250 90.4
Eucgr.E02383 Eucalyptus grandis HOM05D005716 ORTHO05D007885 2.3e-130 469.2 247 90.3
Phvul.002G193800 Phaseolus vulgaris HOM05D005716 ORTHO05D007885 2.3e-130 469.2 249 89.6
TWI09G0986 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 2.3e-130 469.2 273 88.3
Eucgr.E02408 Eucalyptus grandis HOM05D005716 ORTHO05D007885 2.9e-130 468.8 247 90.3
unitig_32.g11441 Utricularia gibba HOM05D005716 ORTHO05D007885 2.9e-130 468.8 251 89.2
CANSAT80G0786 Cannabis sativa HOM05D005716 ORTHO05D007885 6.6e-130 467.6 249 90.0
CsaV3_1G032590 Cucumis sativus L. HOM05D005716 ORTHO05D007885 6.6e-130 467.6 250 89.6
TPR.G4903 Trifolium pratense HOM05D005716 ORTHO05D007885 1.1e-129 466.8 249 89.2
Lsat_1_v5_gn_1_96721 Lactuca sativa HOM05D005716 ORTHO05D007885 1.9e-129 466.1 250 90.0
Medtr4g096770 Medicago truncatula HOM05D005716 ORTHO05D007885 3.3e-129 465.3 249 89.2
Dinv32271 Davidia involucrata HOM05D005716 ORTHO05D007885 4.3e-129 464.9 250 90.4
TWI53G0431 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 4.3e-129 464.9 245 91.4
PSO017G0333 Papaver somniferum HOM05D005716 ORTHO05D007885 7.2e-129 464.2 246 90.7
Migut.H01369 Erythranthe guttata HOM05D005716 ORTHO05D007885 1.2e-128 463.4 246 90.7
MSTRG.13250 Avicennia marina HOM05D005716 ORTHO05D007885 1.6e-128 463.0 249 89.2
Psat7g090160 Pisum sativum HOM05D005716 ORTHO05D007885 3.6e-128 461.8 247 88.7
ATR0585G042 Amborella trichopoda HOM05D005716 ORTHO05D007885 1.0e-127 460.3 252 87.3
SEGI_04817 Sequoiadendron giganteum HOM05D005716 ORTHO05D007885 8.9e-127 457.2 250 87.2
HPP92_010050 Vanilla planifolia HOM05D005716 ORTHO05D007885 4.9e-125 451.4 250 86.0
PSO478G1410 Papaver somniferum HOM05D005716 ORTHO05D007885 7.0e-124 447.6 248 87.5
Sed0010647 Sechium edule HOM05D005716 ORTHO05D007885 2.0e-123 446.0 250 86.0
Os05g0565200 Oryza sativa ssp. japonica HOM05D005716 ORTHO05D007885 1.3e-122 443.4 249 87.1
Mapoly0128s0016 Marchantia polymorpha HOM05D005716 ORTHO05D007885 3.9e-122 441.8 248 84.7
Cpa.g.sc166.24 Carica papaya HOM05D005716 ORTHO05D007885 6.6e-122 441.0 267 83.1
Zm00001eb343840 Zea mays HOM05D005716 ORTHO05D007885 2.3e-119 432.6 228 91.7
Pp3c24_19130 Physcomitrium patens HOM05D005716 ORTHO05D007885 8.9e-119 430.6 239 84.9
MELO3C002721.2 Cucumis melo HOM05D005716 ORTHO05D007885 1.3e-117 426.8 223 91.9
vmacro17882 Vaccinium macrocarpon HOM05D005716 ORTHO05D007885 2.2e-117 426.0 353 64.9
ClCG03G007040 Citrullus lanatus HOM05D005716 ORTHO05D007885 4.1e-116 421.8 250 82.4
SMO353G0068 Selaginella moellendorffii HOM05D005716 ORTHO05D007885 4.1e-116 421.8 246 82.1
AagrBONN_evm.TU.Sc2ySwM_117.3588 Anthoceros agrestis HOM05D005716 ORTHO05D007885 1.9e-113 412.9 243 81.5
CBR_g38955 Chara braunii HOM05D005716 ORTHO05D007885 5.8e-110 401.4 248 77.0
CSS0037137 Camellia sinensis var. sinensis HOM05D005716 ORTHO05D007885 9.2e-108 394.0 222 86.5
Haze_05577 Corylus avellana HOM05D005716 ORTHO05D007885 3.9e-98 362.1 191 92.7
Hma1.2p1_0286F.1_g114150 Hydrangea macrophylla HOM05D005716 ORTHO05D007885 2.0e-94 349.7 189 90.5
MCO04G141 Micromonas commoda HOM05D005716 ORTHO05D007885 3.2e-92 342.4 243 68.7
Nitab4.5_0001655g0090 Nicotiana tabacum HOM05D005716 ORTHO05D007885 2.1e-91 339.7 171 97.7
RcHm_v2.0_Chr5g0013741 Rosa chinensis HOM05D005716 ORTHO05D007885 2.1e-88 329.7 171 93.0
PSO017G6742 Papaver somniferum HOM05D005716 ORTHO05D007885 9.9e-86 320.9 168 93.5
Hund21524 Selenicereus undatus HOM05D005716 ORTHO05D007885 9.9e-86 320.9 181 88.4
Gohir.A10G039600 Gossypium hirsutum HOM05D005716 ORTHO05D007885 3.5e-83 312.4 162 91.4
A04p06350 Brassica napus HOM05D005716 ORTHO05D007885 4.3e-81 305.4 183 82.5
PRCOL_00002216 Prasinoderma coloniale HOM05D005716 ORTHO05D007885 7.1e-76 288.1 185 75.7
FAN17G1884 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.7e-75 286.2 164 86.6
FAN23G0273 Fragaria x ananassa HOM05D005716 ORTHO05D007885 3.0e-74 282.7 164 84.1
FAN25G2810 Fragaria x ananassa HOM05D005716 ORTHO05D007885 8.7e-74 281.2 164 85.4
BcaC02g09191 Brassica carinata HOM05D005716 ORTHO05D031863 2.5e-73 279.6 145 94.5
FAN25G0382 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.6e-70 269.6 199 75.9
C04p39880 Brassica napus HOM05D005716 ORTHO05D007885 3.8e-69 265.8 147 89.1
FAN02G1132 Fragaria x ananassa HOM05D005716 ORTHO05D007885 1.4e-68 263.8 213 66.7
BolC4t25559H Brassica oleracea HOM05D005716 ORTHO05D007885 1.9e-68 263.5 155 85.2
AUR62030221 Chenopodium quinoa HOM05D005716 ORTHO05D007885 7.1e-68 261.5 146 86.3
BraA04t16339Z Brassica rapa HOM05D005716 ORTHO05D007885 2.7e-67 259.6 155 83.9
RcHm_v2.0_Chr5g0013721 Rosa chinensis HOM05D005716 ORTHO05D007885 1.9e-65 253.4 156 80.8
RcHm_v2.0_Chr5g0013731 Rosa chinensis HOM05D005716 ORTHO05D007885 1.4e-60 237.3 148 80.4
Haze_26810 Corylus avellana HOM05D005716 ORTHO05D164461 6.5e-53 211.8 190 54.7
FAN02G0019 Fragaria x ananassa HOM05D005716 ORTHO05D007885 4.2e-52 209.1 151 71.5
Dinv30725 Davidia involucrata HOM05D005716 ORTHO05D007885 1.2e-51 207.6 141 75.2
MSTRG.14769 Avicennia marina HOM05D005716 ORTHO05D007885 1.3e-40 171.0 93 88.2
AUR62030223 Chenopodium quinoa HOM05D005716 ORTHO05D044022 1.3e-40 171.0 167 58.1
FAN08G0336 Fragaria x ananassa HOM05D005716 ORTHO05D044022 3.1e-31 139.8 76 90.8
arahy.Tifrunner.gnm1.ann1.8LN2Z6 Arachis hypogaea HOM05D005716 ORTHO05D087704 4.2e-28 129.4 190 44.7
Dinv30726 Davidia involucrata HOM05D005716 ORTHO05D014961 1.6e-27 127.5 87 79.3
VMungo1309G0118 Vigna mungo HOM05D005716 ORTHO05D437644 6.8e-26 122.1 71 81.7
CAN.G94.3 Capsicum annuum HOM05D005716 ORTHO05D115662 1.2e-25 121.3 93 66.7
C05p14270 Brassica napus HOM05D013073 ORTHO05D014961 2.1e-19 100.5 55 81.8
C06p00300 Brassica napus HOM05D013073 ORTHO05D014961 6.1e-19 99.0 55 80.0
BcaC08g42818 Brassica carinata HOM05D013073 ORTHO05D014961 4.4e-17 92.8 50 82.0
A04p26400 Brassica napus HOM05D005716 ORTHO05D099386 2.7e-14 83.6 46 78.3
C09p15390 Brassica napus HOM05D013073 ORTHO05D014961 7.8e-06 55.5 84 40.5


User provided reference genes

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