Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G650.1 Capsicum annuum HOM05D006050 ORTHO05D007457 1.4e-298 1028.9 523 100.0
Solyc02g070560.3 Solanum lycopersicum HOM05D006050 ORTHO05D007457 2.9e-256 888.3 525 89.0
Nitab4.5_0009607g0030 Nicotiana tabacum HOM05D006050 ORTHO05D007457 1.9e-247 859.0 552 81.9
Nitab4.5_0002275g0100 Nicotiana tabacum HOM05D006050 ORTHO05D007457 5.6e-247 857.4 551 82.0
Peaxi162Scf00170g00718 Petunia axillaris HOM05D006050 ORTHO05D007457 5.2e-229 797.7 522 81.6
Cc09_g09460 Coffea canephora HOM05D006050 ORTHO05D007457 1.6e-182 643.3 462 70.6
Oeu052380.1 Olea europaea HOM05D006050 ORTHO05D007457 2.5e-178 629.4 444 72.5
Migut.M00918 Erythranthe guttata HOM05D006050 ORTHO05D007457 1.1e-175 620.5 473 66.4
Rhsim13G0194500 Rhododendron simsii HOM05D006050 ORTHO05D007457 4.7e-169 598.6 521 63.0
Dinv30732 Davidia involucrata HOM05D006050 ORTHO05D007457 2.6e-167 592.8 409 72.9
Atru.chr10.1253 Acer truncatum HOM05D006050 ORTHO05D007457 2.8e-166 589.3 506 62.6
Hma1.2p1_0286F.1_g114100 Hydrangea macrophylla HOM05D006050 ORTHO05D007457 4.1e-165 585.5 418 70.3
Lj2C306G12 Lonicera japonica HOM05D006050 ORTHO05D007457 5.9e-164 581.6 509 61.9
GSVIVG01021436001 Vitis vinifera HOM05D006050 ORTHO05D007457 1.2e-161 573.9 492 60.6
Potri.011G080600 Populus trichocarpa HOM05D006050 ORTHO05D007457 8.0e-161 571.2 454 66.1
Manes.17G069500 Manihot esculenta HOM05D006050 ORTHO05D007457 1.8e-160 570.1 500 59.8
QL05p058532 Quercus lobata HOM05D006050 ORTHO05D007457 1.1e-159 567.4 495 60.8
Actinidia19520 Actinidia chinensis HOM05D006050 ORTHO05D007457 9.7e-159 564.3 469 62.9
PGR083G2192 Punica granatum HOM05D006050 ORTHO05D007457 4.8e-158 562.0 452 63.7
TAR627G0203 Trochodendron aralioides HOM05D006050 ORTHO05D007457 4.8e-158 562.0 496 61.7
Thecc.06G151800 Theobroma cacao HOM05D006050 ORTHO05D007457 6.3e-158 561.6 453 64.2
SalBow8G2368 Salvia bowleyana HOM05D006050 ORTHO05D007457 1.2e-156 557.4 396 70.2
TWI73G0574 Tripterygium wilfordii HOM05D006050 ORTHO05D007457 1.2e-156 557.4 448 65.2
HanXRQChr02g0047351 Helianthus annuus HOM05D006050 ORTHO05D007457 5.9e-156 555.1 454 65.9
FvH4_3g05720 Fragaria vesca HOM05D006050 ORTHO05D007457 8.5e-155 551.2 494 60.1
Aqoxy4G00089 Aquilegia oxysepala HOM05D006050 ORTHO05D007457 1.1e-154 550.8 510 59.0
MD05G1284800 Malus domestica HOM05D006050 ORTHO05D007457 2.5e-154 549.7 447 64.9
Sabra11G0069700 Salix brachista HOM05D006050 ORTHO05D007457 7.2e-154 548.1 487 61.2
RcHm_v2.0_Chr5g0013951 Rosa chinensis HOM05D006050 ORTHO05D007457 1.6e-153 547.0 452 63.7
Gohir.A05G149000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 6.7e-152 541.6 503 58.6
MD10G1263200 Malus domestica HOM05D006050 ORTHO05D007457 6.7e-152 541.6 444 64.0
Gorai.009G155500 Gossypium raimondii HOM05D006050 ORTHO05D007457 1.5e-151 540.4 503 58.6
Gohir.D05G151500 Gossypium hirsutum HOM05D006050 ORTHO05D007457 7.5e-151 538.1 448 62.9
Eucgr.D00300 Eucalyptus grandis HOM05D006050 ORTHO05D007457 4.8e-150 535.4 470 59.4
vmacro04186 Vaccinium macrocarpon HOM05D006050 ORTHO05D007457 1.4e-149 533.9 367 73.3
PSO017G0250 Papaver somniferum HOM05D006050 ORTHO05D007457 2.2e-147 526.6 453 62.0
PSO170G3783 Papaver somniferum HOM05D006050 ORTHO05D007457 8.5e-147 524.6 456 61.8
CiPaw.09G124900 Carya illinoinensis HOM05D006050 ORTHO05D007457 2.5e-146 523.1 463 60.7
ECA248G2274 Erigeron canadensis HOM05D006050 ORTHO05D007457 4.2e-146 522.3 421 66.3
Nn3g20737 Nelumbo nucifera HOM05D006050 ORTHO05D007457 5.5e-146 521.9 496 58.3
Sabra11G0067500 Salix brachista HOM05D006050 ORTHO05D007457 2.1e-145 520.0 503 57.7
Haze_05583 Corylus avellana HOM05D006050 ORTHO05D007457 1.4e-144 517.3 501 57.1
SGA_v2.0_scaffold1G00164 Striga asiatica HOM05D006050 ORTHO05D007457 1.2e-143 514.2 437 60.2
ClCG03G007090 Citrullus lanatus HOM05D006050 ORTHO05D007457 1.7e-142 510.4 511 54.8
Sed0022060 Sechium edule HOM05D006050 ORTHO05D007457 6.3e-142 508.4 457 58.2
CsaV3_1G032660 Cucumis sativus L. HOM05D006050 ORTHO05D007457 5.4e-141 505.4 453 58.7
DCAR_003921 Daucus carota HOM05D006050 ORTHO05D007457 6.8e-136 488.4 425 61.6
FAN21G0460 Fragaria x ananassa HOM05D006050 ORTHO05D007457 5.7e-135 485.3 448 58.5
Glyma.15G094900 Glycine max HOM05D006050 ORTHO05D007457 9.8e-135 484.6 445 58.0
Phvul.006G163900 Phaseolus vulgaris HOM05D006050 ORTHO05D007457 9.8e-135 484.6 451 57.2
Sc05g0006350 Simmondsia chinensis HOM05D006050 ORTHO05D007457 9.8e-135 484.6 454 56.2
Lj6g0009694 Lotus japonicus HOM05D006050 ORTHO05D007457 2.2e-134 483.4 455 56.5
VMungo0540G2452 Vigna mungo HOM05D006050 ORTHO05D007457 2.8e-134 483.0 451 57.2
Lsat_1_v5_gn_1_97741 Lactuca sativa HOM05D006050 ORTHO05D007457 8.3e-134 481.5 437 59.5
Duzib192G0778 Durio zibethinus HOM05D006050 ORTHO05D007457 1.4e-133 480.7 456 57.7
FAN25G0090 Fragaria x ananassa HOM05D006050 ORTHO05D007457 1.2e-132 477.6 489 55.0
THA.LOC104812850 Tarenaya hassleriana HOM05D006050 ORTHO05D007457 2.5e-130 469.9 477 53.9
Ca_00551_v3 Cicer arietinum L. HOM05D006050 ORTHO05D007457 1.0e-128 464.5 447 56.4
Psat1g190800 Pisum sativum HOM05D006050 ORTHO05D007457 4.0e-128 462.6 452 57.1
Sp7g15790 Schrenkiella parvula HOM05D006050 ORTHO05D007457 6.8e-128 461.8 483 54.2
Thhalv10025036m.g Eutrema salsugineum HOM05D006050 ORTHO05D007457 2.6e-127 459.9 478 54.2
Gorai.011G043000 Gossypium raimondii HOM05D006050 ORTHO05D007457 2.6e-127 459.9 391 59.3
EL10Ac8g19724 Beta vulgaris HOM05D006050 ORTHO05D007457 3.4e-127 459.5 455 52.1
Ciclev10017950m.g Citrus clementina HOM05D006050 ORTHO05D007457 1.7e-126 457.2 473 54.8
Duzib235G1544 Durio zibethinus HOM05D006050 ORTHO05D007457 2.4e-125 453.4 447 56.2
TPR.G28613 Trifolium pratense HOM05D006050 ORTHO05D007457 3.2e-125 453.0 472 54.2
Ah.09g232650 Amaranthus hybridus HOM05D006050 ORTHO05D007457 5.4e-125 452.2 459 50.8
AT4G18270 Arabidopsis thaliana HOM05D006050 ORTHO05D007457 1.2e-124 451.1 450 55.1
AL7G36120 Arabidopsis lyrata HOM05D006050 ORTHO05D007457 2.7e-124 449.9 450 55.1
Medtr2g019630 Medicago truncatula HOM05D006050 ORTHO05D007457 1.7e-123 447.2 444 56.5
BraA03t14200Z Brassica rapa HOM05D006050 ORTHO05D007457 3.9e-123 446.0 448 55.4
A03p51180 Brassica napus HOM05D006050 ORTHO05D007457 5.0e-123 445.7 448 55.4
C07p49580 Brassica napus HOM05D006050 ORTHO05D007457 3.3e-122 443.0 448 55.4
BolC7t45462H Brassica oleracea HOM05D006050 ORTHO05D007457 7.3e-122 441.8 448 55.1
MELO3C002716.2 Cucumis melo HOM05D006050 ORTHO05D007457 4.4e-119 432.6 392 58.4
Aa31LG6G960 Aethionema arabicum HOM05D006050 ORTHO05D007457 1.9e-117 427.2 481 51.6
arahy.Tifrunner.gnm1.ann1.9VA34X Arachis hypogaea HOM05D006050 ORTHO05D007457 3.2e-117 426.4 528 47.9
ATR0044G011 Amborella trichopoda HOM05D006050 ORTHO05D007457 1.2e-116 424.5 394 56.3
arahy.Tifrunner.gnm1.ann1.49YCVY Arachis hypogaea HOM05D006050 ORTHO05D007457 2.3e-115 420.2 538 47.2
Cpa.g.sc166.17 Carica papaya HOM05D006050 ORTHO05D007457 5.0e-115 419.1 307 70.4
AUR62027517 Chenopodium quinoa HOM05D006050 ORTHO05D007457 7.5e-111 405.2 566 42.0
AagrBONN_evm.TU.Sc2ySwM_228.2617 Anthoceros agrestis HOM05D006050 ORTHO05D007457 9.9e-111 404.8 387 55.6
SGA_v2.0_scaffold333G48995 Striga asiatica HOM05D001706 ORTHO05D007457 1.6e-108 397.5 422 52.8
HPP92_021321 Vanilla planifolia HOM05D006050 ORTHO05D007457 4.0e-104 382.9 432 49.5
Sopen02g019650 Solanum pennellii HOM05D006050 ORTHO05D007457 6.4e-102 375.6 332 65.1
SMO239G0146 Selaginella moellendorffii HOM05D006050 ORTHO05D007457 1.4e-101 374.4 326 59.8
HPP92_008747 Vanilla planifolia HOM05D006050 ORTHO05D007457 1.3e-99 367.9 396 50.5
FvH4_3g05710 Fragaria vesca HOM05D006050 ORTHO05D007457 1.2e-97 361.3 321 60.1
Mapoly0001s0010 Marchantia polymorpha HOM05D006050 ORTHO05D007457 8.4e-94 348.6 326 55.8
PGSC0003DMG402021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 9.0e-88 328.6 183 92.9
CBR_g3965 Chara braunii HOM05D006050 ORTHO05D007457 2.3e-83 313.9 356 48.3
PGSC0003DMG401021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 9.9e-79 298.5 166 94.6
MBI10_g02216_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 3.0e-75 287.0 213 69.5
AUR62030211 Chenopodium quinoa HOM05D006050 ORTHO05D007457 2.2e-70 270.8 335 46.0
Carub.0007s2301 Capsella rubella HOM05D006050 ORTHO05D007457 2.7e-68 263.8 193 68.4
COL.COLO4_31087 Corchorus olitorius HOM05D006050 ORTHO05D007457 3.3e-66 256.9 271 50.2
MBI10_g02215_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 2.2e-65 254.2 288 50.3
Glyma.13G217500 Glycine max HOM05D006050 ORTHO05D007457 2.8e-65 253.8 262 51.5
Lalb_Chr18g0055531 Lupinus albus HOM05D006050 ORTHO05D007457 9.0e-64 248.8 190 67.9
Prupe.4G079600 Prunus persica HOM05D006050 ORTHO05D007457 7.7e-63 245.7 275 48.4
Lalb_Chr18g0055521 Lupinus albus HOM05D006050 ORTHO05D007457 6.5e-62 242.7 284 47.2
BcaNung05669 Brassica carinata HOM05D006050 ORTHO05D007457 3.4e-55 220.3 166 67.5
PRCOL_00000982 Prasinoderma coloniale HOM05D006050 ORTHO05D007457 1.0e-54 218.8 324 43.8
unitig_32.g11518 Utricularia gibba HOM05D006050 ORTHO05D007457 4.7e-52 209.9 223 51.6
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 1.7e-49 201.4 208 51.0
DCAR_029765 Daucus carota HOM05D006050 ORTHO05D007457 4.5e-47 193.4 173 61.3
Carub.0007s2300 Capsella rubella HOM05D006050 ORTHO05D007457 2.2e-46 191.0 259 44.0
Zm00001eb120180 Zea mays HOM05D006050 ORTHO05D007457 1.6e-44 184.9 255 42.7
Gohir.D10G040800 Gossypium hirsutum HOM05D006050 ORTHO05D007457 3.9e-43 180.3 194 47.4
Gohir.A10G040000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 5.2e-43 179.9 194 47.4
MCO07G478 Micromonas commoda HOM05D006050 ORTHO05D007457 1.5e-42 178.3 368 38.0
SEGI_20862 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 2.2e-41 174.5 123 70.7
Cpa.g.sc166.18 Carica papaya HOM05D006050 ORTHO05D007457 2.8e-41 174.1 107 81.3
SEGI_21633 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 3.7e-41 173.7 152 59.2
FAN11G0378 Fragaria x ananassa HOM05D006050 ORTHO05D007457 2.4e-40 171.0 144 60.4
CARHR225070 Cardamine hirsuta HOM05D006050 ORTHO05D007457 5.3e-40 169.9 265 40.8
Pp3c6_19460 Physcomitrium patens HOM05D006050 ORTHO05D007457 1.8e-32 144.8 169 46.2
AUR62030212 Chenopodium quinoa HOM05D006050 ORTHO05D007457 1.3e-30 138.7 144 52.1
PSO063G2775 Papaver somniferum HOM05D006050 ORTHO05D007457 4.4e-26 123.6 104 63.5
CSS0017405 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 4.1e-24 117.1 122 55.7
Mapoly0042s0029 Marchantia polymorpha HOM05D006050 ORTHO05D007457 1.2e-23 115.5 135 45.9
DCAR_011844 Daucus carota HOM05D006050 ORTHO05D007457 4.2e-21 107.1 90 63.3
CSS0043541 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 1.6e-20 105.1 66 80.3
COL.COLO4_31088 Corchorus olitorius HOM05D006050 ORTHO05D007457 9.2e-16 89.4 61 72.1
CSS0030855 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 5.0e-14 83.6 46 82.6
CSS0036908 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 5.0e-14 83.6 46 82.6
vmacro04187 Vaccinium macrocarpon HOM05D006050 ORTHO05D030710 1.9e-13 81.6 158 34.8
unitig_32.g11513 Utricularia gibba HOM05D057528 ORTHO05D030710 2.5e-13 81.3 77 46.8
CSS0038270 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 7.3e-13 79.7 72 48.6
PGSC0003DMG403021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 9.8e-10 69.3 61 65.6
Cpa.g.sc166.16 Carica papaya HOM05D006050 ORTHO05D007457 2.4e-08 64.7 120 37.5


User provided reference genes

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