Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G65.42 Capsicum annuum HOM05D000002 ORTHO05D022157 6.6e-102 374.0 185 100.0
CAN.G1435.7 Capsicum annuum HOM05D000002 ORTHO05D022157 4.8e-44 181.8 106 84.9
Sopen00g007880 Solanum pennellii HOM05D000002 ORTHO05D004433 1.1e-35 154.1 284 36.3
Sopen05g027370 Solanum pennellii HOM05D000002 ORTHO05D004433 9.4e-32 141.0 128 58.6
Oeu026048.1 Olea europaea HOM05D000002 ORTHO05D000001 5.3e-27 125.2 71 81.7
CSS0046023 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 7.7e-26 121.3 302 32.1
CSS0046925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 1.5e-24 117.1 75 72.0
GSVIVG01017482001 Vitis vinifera HOM05D000002 ORTHO05D004433 9.4e-24 114.4 74 70.3
SHI10488 Sapria himalayana HOM05D000002 ORTHO05D000001 8.8e-22 107.8 79 62.0
SHI07649 Sapria himalayana HOM05D000002 ORTHO05D004433 1.2e-21 107.5 71 66.2
SHI37106 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-21 107.5 73 64.4
SHI39436 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-21 107.1 71 66.2
SHI39438 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-21 107.1 71 66.2
CAN.G492.33 Capsicum annuum HOM05D000002 ORTHO05D004433 2.0e-21 106.7 72 70.8
SHI02070 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-21 106.3 71 64.8
SHI51732 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-21 106.3 71 64.8
SHI16256 Sapria himalayana HOM05D000002 ORTHO05D004433 4.4e-21 105.5 71 64.8
SHI47859 Sapria himalayana HOM05D000002 ORTHO05D004433 4.4e-21 105.5 71 64.8
SHI10030 Sapria himalayana HOM05D000002 ORTHO05D000001 5.7e-21 105.1 71 62.0
SHI32918 Sapria himalayana HOM05D000002 ORTHO05D000001 7.5e-21 104.8 71 63.4
SHI45609 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-20 104.0 71 63.4
SHI27796 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-20 103.2 71 63.4
SHI14609 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-20 102.8 71 63.4
ECA238G3349 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.8e-20 102.1 110 49.1
SHI06746 Sapria himalayana HOM05D000002 ORTHO05D004433 4.8e-20 102.1 71 62.0
SHI00405 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-19 100.5 72 58.3
SHI45690 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-19 100.1 71 62.0
ECA233G2071 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-19 99.8 71 63.4
SHI04823 Sapria himalayana HOM05D000002 ORTHO05D004433 2.4e-19 99.8 71 62.0
TAR610G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.4e-19 99.8 84 57.1
Oeu032225.1 Olea europaea HOM05D000002 ORTHO05D004433 4.1e-19 99.0 71 63.4
SHI43075 Sapria himalayana HOM05D000002 ORTHO05D000001 5.3e-19 98.6 71 57.7
ECA232G4651 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.1e-19 97.8 71 62.0
SHI47495 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-18 97.4 71 60.6
SHI07648 Sapria himalayana HOM05D000002 ORTHO05D000001 7.7e-18 94.7 117 49.6
SHI18424 Sapria himalayana HOM05D000002 ORTHO05D004433 1.0e-17 94.4 73 57.5
SHI18908 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-17 94.4 117 48.7
Ah.13g077590 Amaranthus hybridus HOM05D000002 ORTHO05D000001 2.2e-17 93.2 86 53.5
SHI05550 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-17 93.2 71 64.8
SHI49936 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-17 92.8 117 47.9
SHI18423 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-16 90.9 117 47.0
Nn1g07613 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.5e-16 90.5 54 75.9
SHI16257 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-16 90.1 117 46.2
SHI47860 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-16 90.1 117 46.2
SHI27797 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-16 89.7 117 46.2
SHI04169 Sapria himalayana HOM05D000002 ORTHO05D000001 5.5e-16 88.6 71 57.7
SHI18328 Sapria himalayana HOM05D000002 ORTHO05D000001 5.5e-16 88.6 117 45.3
SHI32312 Sapria himalayana HOM05D000002 ORTHO05D000001 5.5e-16 88.6 117 46.2
CSS0021348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 7.2e-16 88.2 71 62.0
SHI06745 Sapria himalayana HOM05D000002 ORTHO05D000001 7.2e-16 88.2 117 47.0
ECA240G3347 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-15 87.4 278 26.3
Ah.13g069620 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.7e-15 86.3 70 57.1
MD01G1096700 Malus domestica HOM05D000002 ORTHO05D000001 1.0e-14 84.3 114 47.4
SHI38827 Sapria himalayana HOM05D000002 ORTHO05D004433 2.3e-14 83.2 55 65.5
ECA233G1874 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.8e-14 81.6 66 54.5
ECA234G1536 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.8e-14 81.6 66 54.5
ECA240G4274 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.8e-14 81.6 66 54.5
ECA246G2496 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.8e-14 81.6 66 54.5
SHI12755 Sapria himalayana HOM05D000002 ORTHO05D004433 6.8e-14 81.6 73 52.1
CSS0018245 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.8e-14 81.3 74 47.3
SHI37105 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-13 80.5 96 45.8
SHI04821 Sapria himalayana HOM05D000002 ORTHO05D000001 5.7e-13 78.6 114 41.2
ECA234G3440 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-12 77.4 66 54.5
ECA236G5067 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-12 77.4 66 51.5
ECA238G4719 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-12 77.0 108 42.6
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.7e-12 75.9 73 52.1
ECA238G4301 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.8e-12 75.5 66 53.0
PGSC0003DMG400046635 Solanum tuberosum HOM05D000002 ORTHO05D004433 4.8e-12 75.5 74 48.6
Sopen01g014490 Solanum pennellii HOM05D000004 ORTHO05D000002 6.3e-12 75.1 65 58.5
CAN.G386.34 Capsicum annuum HOM05D000002 ORTHO05D022157 8.3e-12 74.7 98 44.9
ECA247G1586 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-11 73.9 66 51.5
CANSAT80G0509 Cannabis sativa HOM05D000054 ORTHO05D000286 1.8e-11 73.6 56 60.7
ECA240G1708 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-11 73.6 68 50.0
COL.COLO4_30078 Corchorus olitorius HOM05D000002 ORTHO05D004433 7.0e-11 71.6 54 59.3
ECA240G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.0e-11 71.6 66 48.5
Nn1g01470 Nelumbo nucifera HOM05D000002 ORTHO05D004433 7.0e-11 71.6 78 44.9
SHI18395 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-10 70.5 67 59.7
SHI38829 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-10 70.5 77 50.6
ECA233G2319 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-10 70.1 66 50.0
ECA233G2777 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-10 70.1 82 42.7
ECA247G2369 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-10 69.7 66 47.0
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 3.5e-10 69.3 67 47.8
MD16G1129400 Malus domestica HOM05D000001 ORTHO05D022832 1.3e-09 67.4 95 43.2
ECA234G3041 Erigeron canadensis HOM05D001549 ORTHO05D003098 1.7e-09 67.0 67 49.3
SHI44323 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-09 67.0 41 70.7
Oeu011711.1 Olea europaea HOM05D000002 ORTHO05D004433 2.3e-09 66.6 65 53.8
Nn6g35291 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.9e-09 66.2 70 45.7
CAN.G194.2 Capsicum annuum HOM05D000002 ORTHO05D022157 3.8e-09 65.9 44 72.7
SHI03937 Sapria himalayana HOM05D000002 ORTHO05D004433 8.6e-09 64.7 71 45.1
CSS0010112 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-08 63.2 56 44.6
ECA246G4710 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.5e-08 63.2 67 44.8
SHI07223 Sapria himalayana HOM05D000002 ORTHO05D004433 3.2e-08 62.8 56 51.8
SHI18394 Sapria himalayana HOM05D000002 ORTHO05D004433 4.2e-08 62.4 55 58.2
CSS0020823 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.2e-08 61.6 45 64.4
SHI09917 Sapria himalayana HOM05D000002 ORTHO05D000001 9.5e-08 61.2 113 40.7
Sopen07g018900 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-07 60.5 61 54.1
ECA246G0113 Erigeron canadensis HOM05D000082 ORTHO05D000038 2.8e-07 59.7 62 46.8
ECA248G3794 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-07 59.3 62 45.2
FvH4_5g31431 Fragaria vesca HOM05D000002 ORTHO05D004433 3.6e-07 59.3 72 34.7
Hma1.2p1_0459F.1_g157220 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.6e-07 59.3 84 34.5
Rhsim02G0228300 Rhododendron simsii HOM05D000002 ORTHO05D000001 6.1e-07 58.5 96 32.3
ClCG01G016080 Citrullus lanatus HOM05D000002 ORTHO05D000001 1.4e-06 57.4 89 37.1
Oeu006707.1 Olea europaea HOM05D000002 ORTHO05D004433 2.3e-06 56.6 110 31.8
SHI12754 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-06 56.6 56 55.4
PGSC0003DMG400010694 Solanum tuberosum HOM05D000002 ORTHO05D004433 3.0e-06 56.2 34 67.6
CAN.G1029.1 Capsicum annuum HOM05D000002 ORTHO05D004433 4.0e-06 55.8 61 42.6
HanXRQChr05g0130231 Helianthus annuus HOM05D000002 ORTHO05D000001 4.0e-06 55.8 119 36.1
RcHm_v2.0_Chr3g0481931 Rosa chinensis HOM05D000002 ORTHO05D000001 4.0e-06 55.8 72 33.3
RcHm_v2.0_Chr5g0017901 Rosa chinensis HOM05D000002 ORTHO05D000001 5.2e-06 55.5 72 34.7
Nn8g40511 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.8e-06 55.1 72 38.9
SHI07421 Sapria himalayana HOM05D000002 ORTHO05D004433 6.8e-06 55.1 55 50.9


User provided reference genes

Program Settings