Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G65.3 Capsicum annuum HOM05D017231 ORTHO05D001254 3.5e-158 561.6 288 100.0
CAN.G1046.26 Capsicum annuum HOM05D017231 ORTHO05D001254 6.0e-94 348.2 258 76.0
CAN.G65.17 Capsicum annuum HOM05D017231 ORTHO05D001254 1.3e-88 330.5 236 78.8
CAN.G65.7 Capsicum annuum HOM05D017231 ORTHO05D001254 1.3e-80 303.9 283 64.0
CAN.G65.44 Capsicum annuum HOM05D017231 ORTHO05D001254 5.9e-65 251.9 262 59.9
CAN.G65.14 Capsicum annuum HOM05D000147 ORTHO05D001254 1.3e-59 234.2 218 64.2
CAN.G1046.18 Capsicum annuum HOM05D000147 ORTHO05D001254 5.9e-57 225.3 135 86.7
CAN.G1046.25 Capsicum annuum HOM05D017231 ORTHO05D001254 1.8e-50 203.8 224 56.7
CAN.G1046.15 Capsicum annuum HOM05D017231 ORTHO05D001254 3.7e-43 179.5 115 86.1
CAN.G65.10 Capsicum annuum HOM05D017231 ORTHO05D115267 4.6e-25 119.4 157 50.3
CAN.G65.26 Capsicum annuum HOM05D000147 ORTHO05D001254 9.5e-23 111.7 144 52.1
Nitab4.5_0001311g0040 Nicotiana tabacum HOM05D000147 ORTHO05D001254 2.9e-19 100.1 155 41.9
CAN.G352.61 Capsicum annuum HOM05D000147 ORTHO05D001254 3.7e-19 99.8 158 41.1
Peaxi162Scf00089g00241 Petunia axillaris HOM05D000147 ORTHO05D001254 3.7e-19 99.8 153 39.9
Solyc03g110900.4 Solanum lycopersicum HOM05D000147 ORTHO05D001254 2.4e-18 97.1 281 31.7
Sopen03g030090 Solanum pennellii HOM05D000147 ORTHO05D001254 2.4e-18 97.1 281 31.7
Nitab4.5_0011188g0030 Nicotiana tabacum HOM05D000147 ORTHO05D001254 3.2e-18 96.7 310 31.9
Peaxi162Scf00763g00232 Petunia axillaris HOM05D000147 ORTHO05D001254 2.7e-17 93.6 262 35.1
Sopen06g028280 Solanum pennellii HOM05D000147 ORTHO05D001254 3.0e-16 90.1 212 35.4
Actinidia25585 Actinidia chinensis HOM05D000147 ORTHO05D001254 5.6e-15 85.9 333 30.6
Rhsim08G0188900 Rhododendron simsii HOM05D000147 ORTHO05D001254 1.6e-14 84.3 166 36.1
Solyc06g072000.3 Solanum lycopersicum HOM05D000147 ORTHO05D001254 4.7e-14 82.8 222 34.7
Cc04_g10060 Coffea canephora HOM05D000147 ORTHO05D001254 6.2e-14 82.4 155 36.8
vmacro19210 Vaccinium macrocarpon HOM05D000147 ORTHO05D001254 6.2e-14 82.4 163 37.4
Dinv04876 Davidia involucrata HOM05D000147 ORTHO05D001254 3.1e-13 80.1 166 37.3
CSS0038155 Camellia sinensis var. sinensis HOM05D000147 ORTHO05D001254 5.2e-13 79.3 351 30.8
Dinv11160 Davidia involucrata HOM05D000147 ORTHO05D001254 6.8e-13 79.0 166 35.5
ECA246G2694 Erigeron canadensis HOM05D000147 ORTHO05D001254 2.6e-12 77.0 161 32.3
Migut.D01258 Erythranthe guttata HOM05D000147 ORTHO05D001254 4.4e-12 76.3 344 28.5
unitig_22.g5749 Utricularia gibba HOM05D000147 ORTHO05D001254 5.8e-12 75.9 276 30.4
HanXRQChr08g0229281 Helianthus annuus HOM05D000147 ORTHO05D001254 7.5e-12 75.5 152 35.5
Actinidia33105 Actinidia chinensis HOM05D000147 ORTHO05D001254 1.3e-11 74.7 167 35.3
MSTRG.9321 Avicennia marina HOM05D000147 ORTHO05D001254 1.3e-11 74.7 306 32.0
Lj9C478G14 Lonicera japonica HOM05D000147 ORTHO05D001254 4.9e-11 72.8 151 37.7
HanXRQChr05g0155081 Helianthus annuus HOM05D000147 ORTHO05D001254 6.4e-11 72.4 314 31.2
VMungo1309G2384 Vigna mungo HOM05D000147 ORTHO05D001254 8.3e-11 72.0 348 29.6
SGA_v2.0_scaffold37G14623 Striga asiatica HOM05D000147 ORTHO05D001254 1.9e-10 70.9 303 30.0
SGA_v2.0_scaffold5G02871 Striga asiatica HOM05D000147 ORTHO05D001254 1.9e-10 70.9 355 29.3
Dinv01312 Davidia involucrata HOM05D000147 ORTHO05D001254 3.2e-10 70.1 243 30.9
Duzib084G0966 Durio zibethinus HOM05D000147 ORTHO05D001254 3.2e-10 70.1 309 30.4
DCAR_007482 Daucus carota HOM05D000147 ORTHO05D001254 5.4e-10 69.3 167 34.1
Oeu045460.2 Olea europaea HOM05D000147 ORTHO05D001254 5.4e-10 69.3 120 39.2
Phvul.009G167100 Phaseolus vulgaris HOM05D000147 ORTHO05D001254 5.4e-10 69.3 345 29.6
arahy.Tifrunner.gnm1.ann1.C4VIYD Arachis hypogaea HOM05D000147 ORTHO05D001254 1.2e-09 68.2 150 34.7
Thecc.03G127300 Theobroma cacao HOM05D000147 ORTHO05D001254 1.2e-09 68.2 161 32.9
Lsat_1_v5_gn_5_13581 Lactuca sativa HOM05D000147 ORTHO05D001254 1.6e-09 67.8 140 35.0
Lj1g0001991 Lotus japonicus HOM05D000147 ORTHO05D001254 3.5e-09 66.6 156 32.7
Psat5g140840 Pisum sativum HOM05D000147 ORTHO05D001254 6.0e-09 65.9 160 32.5
Potri.012G096300 Populus trichocarpa HOM05D000147 ORTHO05D001254 6.0e-09 65.9 156 32.7
unitig_8.g4033 Utricularia gibba HOM05D000147 ORTHO05D001254 6.0e-09 65.9 203 31.0
Ciclev10018546m.g Citrus clementina HOM05D000147 ORTHO05D001254 1.7e-08 64.3 173 31.2
Duzib205G0476 Durio zibethinus HOM05D000147 ORTHO05D001254 1.7e-08 64.3 161 32.3
MSTRG.11284 Avicennia marina HOM05D000147 ORTHO05D001254 3.0e-08 63.5 160 35.0
Sabra12G0070500 Salix brachista HOM05D000147 ORTHO05D001254 1.1e-07 61.6 156 32.7
Manes.06G118400 Manihot esculenta HOM05D000147 ORTHO05D001254 3.3e-07 60.1 345 28.4
SalBow1G8661 Salvia bowleyana HOM05D000147 ORTHO05D001254 3.3e-07 60.1 155 35.5
Lalb_Chr07g0183371 Lupinus albus HOM05D000147 ORTHO05D001254 4.3e-07 59.7 346 27.2
SalBow1G2067 Salvia bowleyana HOM05D000147 ORTHO05D001254 4.3e-07 59.7 298 26.8
CsaV3_1G009590 Cucumis sativus L. HOM05D000147 ORTHO05D001254 7.3e-07 58.9 302 27.5
COL.COLO4_28089 Corchorus olitorius HOM05D000147 ORTHO05D001254 9.5e-07 58.5 357 25.8
Medtr3g089100 Medicago truncatula HOM05D000147 ORTHO05D001254 9.5e-07 58.5 113 34.5
TPR.G26136 Trifolium pratense HOM05D000147 ORTHO05D001254 9.5e-07 58.5 308 28.2
Eucgr.K02736 Eucalyptus grandis HOM05D000147 ORTHO05D001254 1.2e-06 58.2 343 29.2
Sed0011415 Sechium edule HOM05D000147 ORTHO05D001254 1.2e-06 58.2 148 31.1
CDE05G0712 Ceratophyllum demersum HOM05D000147 ORTHO05D001254 2.1e-06 57.4 136 33.1
TWI39G1195 Tripterygium wilfordii HOM05D000147 ORTHO05D001254 2.1e-06 57.4 174 27.6
Nn4g21994 Nelumbo nucifera HOM05D000147 ORTHO05D001254 2.8e-06 57.0 307 26.4
Nn4g22355 Nelumbo nucifera HOM05D000147 ORTHO05D001254 2.8e-06 57.0 307 26.4
Glyma.04G194900 Glycine max HOM05D000147 ORTHO05D001254 3.6e-06 56.6 168 30.4
QL10p004049 Quercus lobata HOM05D000147 ORTHO05D001254 3.6e-06 56.6 307 29.3
MELO3C002356.2 Cucumis melo HOM05D000147 ORTHO05D001254 4.7e-06 56.2 336 26.2
ClCG03G003710 Citrullus lanatus HOM05D000147 ORTHO05D001254 6.2e-06 55.8 343 27.1
DCAR_016403 Daucus carota HOM05D000147 ORTHO05D001254 6.2e-06 55.8 340 27.6
CANSAT80G0650 Cannabis sativa HOM05D000147 ORTHO05D001254 8.1e-06 55.5 340 26.5


User provided reference genes

Program Settings