Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G65.211 Capsicum annuum HOM05D006479 ORTHO05D008310 4.7e-76 287.7 140 100.0
Solyc06g073650.1 Solanum lycopersicum HOM05D006479 ORTHO05D008310 2.4e-48 195.7 148 67.6
Sopen06g030060 Solanum pennellii HOM05D006479 ORTHO05D008310 2.4e-48 195.7 148 67.6
PGSC0003DMG400005946 Solanum tuberosum HOM05D006479 ORTHO05D008310 1.2e-47 193.4 148 66.9
Nitab4.5_0006265g0010 Nicotiana tabacum HOM05D006479 ORTHO05D008310 3.0e-46 188.7 148 66.9
Solyc11g072050.1 Solanum lycopersicum HOM05D006479 ORTHO05D008310 3.0e-46 188.7 145 65.5
Sopen11g029700 Solanum pennellii HOM05D006479 ORTHO05D008310 3.0e-46 188.7 145 65.5
PGSC0003DMG400027398 Solanum tuberosum HOM05D006479 ORTHO05D008310 5.1e-46 188.0 145 64.8
CAN.G280.16 Capsicum annuum HOM05D006479 ORTHO05D008310 7.3e-45 184.1 145 64.1
Cc01_g07460 Coffea canephora HOM05D006479 ORTHO05D008310 3.1e-35 152.1 133 59.4
Duzib168G1317 Durio zibethinus HOM05D006479 ORTHO05D008310 1.3e-33 146.7 146 54.8
CSS0011125 Camellia sinensis var. sinensis HOM05D006479 ORTHO05D008310 3.8e-33 145.2 146 53.4
CSS0016000 Camellia sinensis var. sinensis HOM05D006479 ORTHO05D008310 3.8e-33 145.2 146 53.4
COL.COLO4_25288 Corchorus olitorius HOM05D006479 ORTHO05D008310 3.8e-33 145.2 146 54.8
Nitab4.5_0000205g0010 Nicotiana tabacum HOM05D006479 ORTHO05D008310 1.4e-32 143.3 119 61.3
Oeu032070.1 Olea europaea HOM05D006479 ORTHO05D008310 1.9e-32 142.9 146 54.1
Peaxi162Scf00978g00216 Petunia axillaris HOM05D006479 ORTHO05D008310 2.4e-32 142.5 125 60.0
Gohir.A05G075300 Gossypium hirsutum HOM05D006479 ORTHO05D008310 5.4e-32 141.4 144 51.4
Nitab4.5_0008289g0040 Nicotiana tabacum HOM05D006479 ORTHO05D008310 5.4e-32 141.4 116 61.2
Thecc.09G263400 Theobroma cacao HOM05D006479 ORTHO05D008310 9.3e-32 140.6 146 54.8
Rhsim13G0200600 Rhododendron simsii HOM05D006479 ORTHO05D008310 2.1e-31 139.4 147 51.0
MELO3C014710.2 Cucumis melo HOM05D006479 ORTHO05D008310 2.7e-31 139.0 137 54.0
arahy.Tifrunner.gnm1.ann1.K8UYYD Arachis hypogaea HOM05D006479 ORTHO05D008310 3.5e-31 138.7 146 52.7
arahy.Tifrunner.gnm1.ann1.Y6PBB0 Arachis hypogaea HOM05D006479 ORTHO05D008310 3.5e-31 138.7 146 52.7
Gohir.D05G078100 Gossypium hirsutum HOM05D006479 ORTHO05D008310 6.0e-31 137.9 144 50.7
Gorai.009G079600 Gossypium raimondii HOM05D006479 ORTHO05D008310 6.0e-31 137.9 144 50.7
Cpa.g.sc103.78 Carica papaya HOM05D006479 ORTHO05D008310 7.9e-31 137.5 146 53.4
Hma1.2p1_0218F.1_g092540 Hydrangea macrophylla HOM05D006479 ORTHO05D008310 7.9e-31 137.5 131 55.7
ClCG02G024250 Citrullus lanatus HOM05D006479 ORTHO05D008310 1.3e-30 136.7 132 55.3
HanXRQChr16g0509731 Helianthus annuus HOM05D006479 ORTHO05D008310 1.3e-30 136.7 116 62.1
Actinidia07016 Actinidia chinensis HOM05D006479 ORTHO05D008310 1.8e-30 136.3 147 51.7
DCAR_002128 Daucus carota HOM05D006479 ORTHO05D008310 1.8e-30 136.3 119 58.8
Migut.N02413 Erythranthe guttata HOM05D006479 ORTHO05D008310 3.0e-30 135.6 147 51.7
Lj2C905T5 Lonicera japonica HOM05D006479 ORTHO05D008310 3.0e-30 135.6 145 54.5
LjContig00564g0006585 Lotus japonicus HOM05D006479 ORTHO05D008310 3.0e-30 135.6 117 58.1
Oeu025955.1 Olea europaea HOM05D006479 ORTHO05D008310 3.9e-30 135.2 120 58.3
Nitab4.5_0000271g0270 Nicotiana tabacum HOM05D006479 ORTHO05D008310 5.1e-30 134.8 92 70.7
CiPaw.14G092100 Carya illinoinensis HOM05D006479 ORTHO05D008310 6.7e-30 134.4 137 53.3
Atru.chr3.2921 Acer truncatum HOM05D006479 ORTHO05D008310 8.7e-30 134.0 113 61.1
MSTRG.17656 Avicennia marina HOM05D006479 ORTHO05D008310 8.7e-30 134.0 145 52.4
Ca_06149_v3 Cicer arietinum L. HOM05D006479 ORTHO05D008310 1.1e-29 133.7 154 47.4
Ciclev10014249m.g Citrus clementina HOM05D006479 ORTHO05D008310 1.1e-29 133.7 148 50.0
QL01p020440 Quercus lobata HOM05D006479 ORTHO05D008310 1.1e-29 133.7 110 61.8
ECA236G3846 Erigeron canadensis HOM05D006479 ORTHO05D008310 1.5e-29 133.3 110 62.7
Thhalv10016076m.g Eutrema salsugineum HOM05D006479 ORTHO05D008310 1.5e-29 133.3 111 60.4
TWI79G0137 Tripterygium wilfordii HOM05D006479 ORTHO05D008310 1.5e-29 133.3 115 60.0
Manes.04G055500 Manihot esculenta HOM05D006479 ORTHO05D008310 1.9e-29 132.9 134 53.0
Medtr5g087680 Medicago truncatula HOM05D006479 ORTHO05D008310 1.9e-29 132.9 151 47.7
GSVIVG01037436001 Vitis vinifera HOM05D006479 ORTHO05D008310 1.9e-29 132.9 105 61.9
Sp6g23500 Schrenkiella parvula HOM05D006479 ORTHO05D008310 2.5e-29 132.5 108 60.2
C09p55040 Brassica napus HOM05D006479 ORTHO05D008310 3.3e-29 132.1 105 61.0
BolC9t58367H Brassica oleracea HOM05D006479 ORTHO05D008310 3.3e-29 132.1 105 61.0
Lalb_Chr10g0105871 Lupinus albus HOM05D006479 ORTHO05D008310 4.3e-29 131.7 139 50.4
RcHm_v2.0_Chr5g0049781 Rosa chinensis HOM05D006479 ORTHO05D008310 4.3e-29 131.7 115 60.9
Glyma.14G044300 Glycine max HOM05D006479 ORTHO05D008310 5.6e-29 131.3 144 50.0
TWI31G0851 Tripterygium wilfordii HOM05D006479 ORTHO05D008310 5.6e-29 131.3 118 59.3
CsaV3_4G017380 Cucumis sativus L. HOM05D006479 ORTHO05D008310 7.4e-29 131.0 132 53.8
Lsat_1_v5_gn_8_104041 Lactuca sativa HOM05D006479 ORTHO05D008310 1.3e-28 130.2 114 58.8
A10p19030 Brassica napus HOM05D006479 ORTHO05D008310 1.6e-28 129.8 105 60.0
BraA10t43981Z Brassica rapa HOM05D006479 ORTHO05D008310 1.6e-28 129.8 105 60.0
CANSAT54G0955 Cannabis sativa HOM05D006479 ORTHO05D008310 1.6e-28 129.8 136 50.0
FAN25G2741 Fragaria x ananassa HOM05D006479 ORTHO05D008310 1.6e-28 129.8 108 62.0
TPR.G11782 Trifolium pratense HOM05D006479 ORTHO05D008310 2.1e-28 129.4 147 49.7
FAN16G0753 Fragaria x ananassa HOM05D006479 ORTHO05D008310 2.8e-28 129.0 108 62.0
MD00G1031900 Malus domestica HOM05D006479 ORTHO05D008310 2.8e-28 129.0 122 53.3
FAN21G3675 Fragaria x ananassa HOM05D006479 ORTHO05D008310 3.6e-28 128.6 108 61.1
AT5G21040 Arabidopsis thaliana HOM05D006479 ORTHO05D008310 6.2e-28 127.9 108 59.3
FvH4_3g27150 Fragaria vesca HOM05D006479 ORTHO05D008310 6.2e-28 127.9 108 61.1
FAN11G0648 Fragaria x ananassa HOM05D006479 ORTHO05D008310 6.2e-28 127.9 108 61.1
VMungo0647G2395 Vigna mungo HOM05D006479 ORTHO05D008310 8.1e-28 127.5 111 56.8
Duzib150G0338 Durio zibethinus HOM05D006479 ORTHO05D008310 1.1e-27 127.1 133 52.6
Aa31LG1G13720 Aethionema arabicum HOM05D006479 ORTHO05D008310 1.4e-27 126.7 108 59.3
Glyma.02G273700 Glycine max HOM05D006479 ORTHO05D008310 1.4e-27 126.7 118 55.1
TAR633G1538 Trochodendron aralioides HOM05D006479 ORTHO05D008310 1.4e-27 126.7 110 59.1
MD11G1180000 Malus domestica HOM05D006479 ORTHO05D008310 1.8e-27 126.3 115 57.4
Psat2g023000 Pisum sativum HOM05D006479 ORTHO05D008310 1.8e-27 126.3 151 49.7
EL10Ac7g16227 Beta vulgaris HOM05D006479 ORTHO05D008310 5.3e-27 124.8 109 60.6
Carub.0006s1934 Capsella rubella HOM05D006479 ORTHO05D008310 5.3e-27 124.8 108 58.3
Prupe.6G152700 Prunus persica HOM05D006479 ORTHO05D008310 9.0e-27 124.0 122 51.6
PGR119G2537 Punica granatum HOM05D006479 ORTHO05D008310 9.0e-27 124.0 125 51.2
THA.LOC104810966 Tarenaya hassleriana HOM05D006479 ORTHO05D008310 1.2e-26 123.6 110 58.2
AL6G32590 Arabidopsis lyrata HOM05D006479 ORTHO05D008310 1.5e-26 123.2 108 57.4
Cfa010250 Carpinus fangiana HOM05D006479 ORTHO05D008310 4.5e-26 121.7 130 50.8
Eucgr.J00620 Eucalyptus grandis HOM05D006479 ORTHO05D008310 9.9e-26 120.6 108 58.3
MBI13_g00570_MAGBIO Magnolia biondii HOM05D006479 ORTHO05D008310 9.9e-26 120.6 110 56.4
Sc21g0006530 Simmondsia chinensis HOM05D006479 ORTHO05D008310 9.9e-26 120.6 144 48.6
AUR62020174 Chenopodium quinoa HOM05D006479 ORTHO05D008310 1.3e-25 120.2 109 58.7
AUR62001606 Chenopodium quinoa HOM05D006479 ORTHO05D008310 2.9e-25 119.0 107 58.9
PSO339G5772 Papaver somniferum HOM05D006479 ORTHO05D008310 1.4e-24 116.7 120 50.8
PSO384G3454 Papaver somniferum HOM05D006479 ORTHO05D008310 1.4e-24 116.7 120 50.8
Potri.009G157900 Populus trichocarpa HOM05D006479 ORTHO05D008310 1.4e-24 116.7 133 48.9
ATR0068G008 Amborella trichopoda HOM05D006479 ORTHO05D008310 1.9e-24 116.3 111 54.1
Aqoxy1G00109 Aquilegia oxysepala HOM05D006479 ORTHO05D008310 2.4e-24 115.9 105 56.2
SHI25344 Sapria himalayana HOM05D006479 ORTHO05D008310 4.2e-24 115.2 116 53.4
HPP92_021206 Vanilla planifolia HOM05D006479 ORTHO05D008310 2.1e-23 112.8 118 48.3
Migut.D00711 Erythranthe guttata HOM05D006479 ORTHO05D008310 6.0e-23 111.3 148 45.3
CARHR191830 Cardamine hirsuta HOM05D006479 ORTHO05D008310 1.3e-22 110.2 105 52.4
CDE02G1192 Ceratophyllum demersum HOM05D006479 ORTHO05D008310 2.3e-22 109.4 106 51.9
Os04g0619700 Oryza sativa ssp. japonica HOM05D006479 ORTHO05D008310 2.3e-22 109.4 149 42.3
CDE08G0797 Ceratophyllum demersum HOM05D006479 ORTHO05D008310 5.1e-22 108.2 108 51.9
SEGI_01115 Sequoiadendron giganteum HOM05D006479 ORTHO05D008310 1.9e-21 106.3 107 49.5
Sabra09G0123500 Salix brachista HOM05D006479 ORTHO05D008310 3.3e-21 105.5 130 45.4
Haze_23643 Corylus avellana HOM05D006479 ORTHO05D008310 1.6e-20 103.2 110 49.1
Zm00001eb431140 Zea mays HOM05D006479 ORTHO05D008310 2.1e-20 102.8 150 41.3
Ah.08g222720 Amaranthus hybridus HOM05D006479 ORTHO05D008310 1.1e-19 100.5 107 52.3
SGA_v2.0_scaffold16G07575 Striga asiatica HOM05D006479 ORTHO05D008310 1.2e-18 97.1 80 57.5
Mapoly0060s0027 Marchantia polymorpha HOM05D006479 ORTHO05D008310 1.5e-18 96.7 133 42.1
Sed0023099 Sechium edule HOM05D006479 ORTHO05D010107 8.4e-17 90.9 109 46.8
SMO358G0705 Selaginella moellendorffii HOM05D006479 ORTHO05D008310 1.1e-16 90.5 100 44.0
BcaC04g19499 Brassica carinata HOM05D006479 ORTHO05D008310 9.3e-16 87.4 99 47.5
SEGI_34026 Sequoiadendron giganteum HOM05D006479 ORTHO05D008310 4.6e-15 85.1 108 42.6
Pp3c4_8230 Physcomitrium patens HOM05D006479 ORTHO05D008310 1.3e-14 83.6 117 41.0


User provided reference genes

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