Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G65.185 Capsicum annuum HOM05D005746 ORTHO05D007105 1.0e-131 473.4 241 100.0
CAN.G284.10 Capsicum annuum HOM05D005746 ORTHO05D007105 1.8e-107 392.9 284 76.1
CAN.G1205.1 Capsicum annuum HOM05D005746 ORTHO05D007105 1.9e-101 372.9 316 66.8
Solyc03g062650.3 Solanum lycopersicum HOM05D005746 ORTHO05D007105 2.3e-94 349.4 316 62.7
Sopen03g014980 Solanum pennellii HOM05D005746 ORTHO05D007105 8.6e-94 347.4 316 62.3
Nitab4.5_0002923g0020 Nicotiana tabacum HOM05D005746 ORTHO05D007105 2.1e-87 326.2 309 59.9
CAN.G352.19 Capsicum annuum HOM05D005746 ORTHO05D007105 8.1e-84 314.3 215 78.6
Peaxi162Scf00451g00821 Petunia axillaris HOM05D005746 ORTHO05D007105 8.1e-84 314.3 308 57.8
Actinidia06086 Actinidia chinensis HOM05D005746 ORTHO05D007105 7.6e-74 281.2 326 50.3
CSS0009890 Camellia sinensis var. sinensis HOM05D005746 ORTHO05D007105 1.9e-72 276.6 326 48.8
CSS0043134 Camellia sinensis var. sinensis HOM05D005746 ORTHO05D007105 1.9e-72 276.6 326 48.8
Dinv33748 Davidia involucrata HOM05D005746 ORTHO05D007105 1.9e-72 276.6 326 48.5
Lju41A18T48 Lonicera japonica HOM05D005746 ORTHO05D007105 5.4e-72 275.0 323 51.1
CAN.G691.2 Capsicum annuum HOM05D005746 ORTHO05D007105 2.1e-71 273.1 270 62.2
Oeu060938.1 Olea europaea HOM05D005746 ORTHO05D007105 6.0e-71 271.6 328 49.1
Duzib147G0034 Durio zibethinus HOM05D005746 ORTHO05D007105 1.6e-68 263.5 317 47.6
Hund15611 Selenicereus undatus HOM05D005746 ORTHO05D007105 2.8e-68 262.7 325 46.2
Lsat_1_v5_gn_3_100801 Lactuca sativa HOM05D005746 ORTHO05D007105 3.6e-68 262.3 305 48.5
Eucgr.J01361 Eucalyptus grandis HOM05D005746 ORTHO05D007105 4.8e-68 261.9 317 47.3
Atru.chr8.140 Acer truncatum HOM05D005746 ORTHO05D007105 6.2e-68 261.5 327 45.0
CiPaw.03G027900 Carya illinoinensis HOM05D005746 ORTHO05D007105 6.2e-68 261.5 322 46.9
ECA246G0262 Erigeron canadensis HOM05D005746 ORTHO05D007105 6.2e-68 261.5 303 50.2
Cc07_g03290 Coffea canephora HOM05D005746 ORTHO05D007105 4.0e-67 258.8 316 49.1
vmacro05704 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 6.9e-67 258.1 328 46.6
CAN.G697.12 Capsicum annuum HOM05D005746 ORTHO05D007105 9.0e-67 257.7 205 69.3
HanXRQChr14g0439111 Helianthus annuus HOM05D005746 ORTHO05D007105 9.0e-67 257.7 304 48.7
SGA_v2.0_scaffold1G00328 Striga asiatica HOM05D005746 ORTHO05D007105 9.0e-67 257.7 318 47.8
Duzib147G0404 Durio zibethinus HOM05D005746 ORTHO05D007105 1.2e-66 257.3 317 47.0
DCAR_021658 Daucus carota HOM05D005746 ORTHO05D007105 1.5e-66 256.9 313 49.2
Gorai.006G018000 Gossypium raimondii HOM05D005746 ORTHO05D007105 4.4e-66 255.4 323 45.8
RcHm_v2.0_Chr2g0168711 Rosa chinensis HOM05D005746 ORTHO05D007105 4.4e-66 255.4 318 47.8
Gohir.A09G017100 Gossypium hirsutum HOM05D005746 ORTHO05D007105 7.6e-66 254.6 323 45.8
vmacro17103 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 1.3e-65 253.8 328 46.0
Migut.H00912 Erythranthe guttata HOM05D005746 ORTHO05D007105 1.7e-65 253.4 324 46.3
Lalb_Chr06g0175391 Lupinus albus HOM05D005746 ORTHO05D007105 2.2e-65 253.1 285 48.8
FAN02G0556 Fragaria x ananassa HOM05D005746 ORTHO05D007105 2.9e-65 252.7 307 46.6
MD09G1049900 Malus domestica HOM05D005746 ORTHO05D007105 2.9e-65 252.7 334 45.8
Rhsim10G0040100 Rhododendron simsii HOM05D005746 ORTHO05D007105 2.9e-65 252.7 339 44.2
TWI34G0228 Tripterygium wilfordii HOM05D005746 ORTHO05D007105 8.4e-65 251.1 316 47.8
arahy.Tifrunner.gnm1.ann1.C4FZ3V Arachis hypogaea HOM05D005746 ORTHO05D007105 1.4e-64 250.4 327 45.3
PSO017G1620 Papaver somniferum HOM05D005746 ORTHO05D007105 1.4e-64 250.4 340 43.5
arahy.Tifrunner.gnm1.ann1.IK9RDG Arachis hypogaea HOM05D005746 ORTHO05D007105 1.9e-64 250.0 327 44.6
Cfa007537 Carpinus fangiana HOM05D005746 ORTHO05D007105 2.4e-64 249.6 327 44.0
THA.LOC104823176 Tarenaya hassleriana HOM05D005746 ORTHO05D007105 3.2e-64 249.2 321 44.5
FvH4_6g48870 Fragaria vesca HOM05D005746 ORTHO05D007105 9.3e-64 247.7 307 45.9
Potri.004G128601 Populus trichocarpa HOM05D005746 ORTHO05D007105 9.3e-64 247.7 321 46.1
Sed0005323 Sechium edule HOM05D005746 ORTHO05D007105 9.3e-64 247.7 316 45.3
MD17G1050300 Malus domestica HOM05D005746 ORTHO05D007105 1.2e-63 247.3 326 45.4
MELO3C009878.2 Cucumis melo HOM05D005746 ORTHO05D007105 1.6e-63 246.9 315 45.1
COL.COLO4_33291 Corchorus olitorius HOM05D005746 ORTHO05D007105 2.7e-63 246.1 314 45.9
Cpa.g.sc14.10 Carica papaya HOM05D005746 ORTHO05D007105 3.5e-63 245.7 323 43.7
VMungo0464G0208 Vigna mungo HOM05D005746 ORTHO05D007105 1.3e-62 243.8 286 50.3
Ciclev10010889m.g Citrus clementina HOM05D005746 ORTHO05D007105 1.7e-62 243.4 324 43.2
ClCG10G014980 Citrullus lanatus HOM05D005746 ORTHO05D007105 2.3e-62 243.0 315 44.4
Haze_14549 Corylus avellana HOM05D005746 ORTHO05D007105 2.3e-62 243.0 318 44.3
EL10Ac2g02971 Beta vulgaris HOM05D005746 ORTHO05D007105 3.9e-62 242.3 326 42.9
CsaV3_3G041540 Cucumis sativus L. HOM05D005746 ORTHO05D007105 5.1e-62 241.9 315 44.4
TAR374G0083 Trochodendron aralioides HOM05D005746 ORTHO05D007105 5.1e-62 241.9 330 43.6
MSTRG.3234 Avicennia marina HOM05D005746 ORTHO05D007105 1.9e-61 240.0 323 45.8
PGR083G2853 Punica granatum HOM05D005746 ORTHO05D007105 2.5e-61 239.6 306 46.1
Sabra04G0090500 Salix brachista HOM05D005746 ORTHO05D007105 2.5e-61 239.6 319 43.9
CARHR165190 Cardamine hirsuta HOM05D005746 ORTHO05D007105 3.3e-61 239.2 306 46.4
AUR62034394 Chenopodium quinoa HOM05D005746 ORTHO05D007105 3.3e-61 239.2 325 42.5
Nn4g23132 Nelumbo nucifera HOM05D005746 ORTHO05D007105 3.3e-61 239.2 327 43.7
A06p40280 Brassica napus HOM05D005746 ORTHO05D007105 7.4e-61 238.0 300 46.0
BraA06t26946Z Brassica rapa HOM05D005746 ORTHO05D007105 7.4e-61 238.0 300 46.0
BcaC06g33649 Brassica carinata HOM05D005746 ORTHO05D007105 9.6e-61 237.7 296 47.0
C07p37790 Brassica napus HOM05D005746 ORTHO05D007105 9.6e-61 237.7 296 47.0
BolC7t44300H Brassica oleracea HOM05D005746 ORTHO05D007105 9.6e-61 237.7 296 47.0
MBI05_g35450_MAGBIO Magnolia biondii HOM05D005746 ORTHO05D007105 1.3e-60 237.3 329 43.2
Sc14g0005950 Simmondsia chinensis HOM05D005746 ORTHO05D007105 1.3e-60 237.3 331 42.6
CAN.G525.35 Capsicum annuum HOM05D005746 ORTHO05D007105 1.6e-60 236.9 232 59.1
AUR62039819 Chenopodium quinoa HOM05D005746 ORTHO05D007105 2.1e-60 236.5 325 41.5
Thhalv10003503m.g Eutrema salsugineum HOM05D005746 ORTHO05D007105 2.1e-60 236.5 306 45.8
Lj2g0006836 Lotus japonicus HOM05D005746 ORTHO05D007105 2.1e-60 236.5 331 42.6
Carub.0005s2180 Capsella rubella HOM05D005746 ORTHO05D007105 2.8e-60 236.1 306 45.4
Psat1g074560 Pisum sativum HOM05D005746 ORTHO05D007105 2.8e-60 236.1 322 44.7
CAN.G385.2 Capsicum annuum HOM05D005746 ORTHO05D007105 1.8e-59 233.4 170 74.1
QL02p081653 Quercus lobata HOM05D005746 ORTHO05D007105 3.1e-59 232.6 308 42.5
Phvul.004G028000 Phaseolus vulgaris HOM05D005746 ORTHO05D007105 4.0e-59 232.3 305 45.6
Aa31LG2G4330 Aethionema arabicum HOM05D005746 ORTHO05D007105 5.3e-59 231.9 313 43.8
VMungo0464G0495 Vigna mungo HOM05D005746 ORTHO05D007105 5.3e-59 231.9 309 46.0
AT3G55160 Arabidopsis thaliana HOM05D005746 ORTHO05D007105 6.9e-59 231.5 304 45.1
Glyma.19G021700 Glycine max HOM05D005746 ORTHO05D007105 9.0e-59 231.1 308 44.5
Sp2g17500 Schrenkiella parvula HOM05D005746 ORTHO05D007105 1.5e-58 230.3 306 44.8
HPP92_011243 Vanilla planifolia HOM05D005746 ORTHO05D007105 2.6e-58 229.6 297 46.8
AL5G36280 Arabidopsis lyrata HOM05D005746 ORTHO05D007105 3.4e-58 229.2 306 44.8
Ca_04277_v3 Cicer arietinum L. HOM05D005746 ORTHO05D007105 5.8e-58 228.4 332 43.4
Medtr6g011760 Medicago truncatula HOM05D005746 ORTHO05D007105 5.8e-58 228.4 322 43.8
Aqoxy3G00678 Aquilegia oxysepala HOM05D005746 ORTHO05D007105 7.6e-58 228.0 325 40.9
TPR.G10375 Trifolium pratense HOM05D005746 ORTHO05D007105 9.9e-58 227.6 324 43.2
Zm00001eb414960 Zea mays HOM05D005746 ORTHO05D007105 1.7e-57 226.9 296 44.3
vmacro05485 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 1.8e-54 216.9 250 52.8
vmacro05746 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 1.8e-54 216.9 328 42.4
vmacro22549 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 1.4e-51 207.2 293 45.4
CDE09G1403 Ceratophyllum demersum HOM05D005746 ORTHO05D007105 2.4e-51 206.5 334 40.1
ATR0564G261 Amborella trichopoda HOM05D005746 ORTHO05D007105 1.6e-44 183.7 365 34.0
SEGI_38380 Sequoiadendron giganteum HOM05D005746 ORTHO05D007105 2.8e-36 156.4 354 31.4
GSVIVG01011388001 Vitis vinifera HOM05D005746 ORTHO05D007105 1.5e-34 150.6 130 63.8
FAN09G1953 Fragaria x ananassa HOM05D005746 ORTHO05D007105 2.6e-34 149.8 107 64.5
Gohir.D09G015833 Gossypium hirsutum HOM05D005746 ORTHO05D007105 2.7e-31 139.8 164 47.6
unitig_0.g531 Utricularia gibba HOM05D005746 ORTHO05D007105 4.6e-31 139.0 233 39.1
CAN.G853.24 Capsicum annuum HOM05D005746 ORTHO05D007105 4.8e-28 129.0 99 69.7
SMO367G0809 Selaginella moellendorffii HOM05D005746 ORTHO05D007105 1.1e-27 127.9 337 27.3
Mapoly0207s0007 Marchantia polymorpha HOM05D005746 ORTHO05D007105 3.8e-25 119.4 354 28.2
Pp3c6_28730 Physcomitrium patens HOM05D005746 ORTHO05D007105 2.3e-22 110.2 156 40.4
AagrBONN_evm.TU.Sc2ySwM_369.378 Anthoceros agrestis HOM05D005746 ORTHO05D007105 2.0e-21 107.1 125 41.6
CBR_g50021 Chara braunii HOM05D005746 ORTHO05D007105 3.6e-15 86.3 113 39.8
Manes.15G175000 Manihot esculenta HOM05D005746 ORTHO05D007105 1.8e-14 84.0 60 63.3
Thecc.04G080100 Theobroma cacao HOM05D005746 ORTHO05D007105 5.7e-13 79.0 56 66.1
Prupe.3G268800 Prunus persica HOM05D005746 ORTHO05D007105 1.7e-12 77.4 46 76.1
AagrBONN_evm.TU.Sc2ySwM_369.374 Anthoceros agrestis HOM05D005746 ORTHO05D007105 6.5e-09 65.5 57 47.4
MCO11G207 Micromonas commoda HOM05D005746 ORTHO05D007105 1.1e-08 64.7 102 33.3
Gohir.D09G015800 Gossypium hirsutum HOM05D005746 ORTHO05D007105 7.2e-08 62.0 34 82.4


User provided reference genes

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